RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 Q8N1X5 172 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 VAMP8Q9BV40 100 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 KMT2AQ03164 3969 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 IGHV1-58A0A0C4DH39 117 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 A0A1B0GWB2 263 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 K7EP34 96 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 TAX1BP3O14907 124 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 SEC61BP60468 96 aaKnown RBP1.63□□□□□ -2.15
PRPF39-205ENST00000554081 S100A7L2Q5SY68 101 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 TMEM141Q96I45 108 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 RETNLBQ9BQ08 111 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 UQCR10Q9UDW1 63 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 CDKN2A-AS1Q9UH64 79 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 PLA2G2DQ9UNK4 145 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 V9GYV3 84 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 C19orf71A6NCJ1 209 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 TMEM258P61165 79 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 PAPPA-AS1Q5QFB9 102 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 C10orf25Q5T742 122 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 Q6ZVQ6 151 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 RBM12B-AS1Q9P1G2 102 aa1.63□□□□□ -2.15
PRPF39-205ENST00000554081 IGLV9-49A0A0B4J1Y8 123 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 TRAV1-1A0A0B4J248 108 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 H3BRM9 83 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 NCR3O14931 201 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST1H2BKO60814 126 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST1H2BJP06899 126 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST1H2BOP23527 126 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST1H2BBP33778 126 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 NMUP48645 174 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST1H2BDP58876 126 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST1H2BCP62807 126 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 PRR3P79522 188 aaKnown RBP1.62□□□□□ -2.15
PRPF39-205ENST00000554081 PRLHP81277 87 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST2H2BEQ16778 126 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-205ENST00000554081 NOTCH2NLQ7Z3S9 236 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST1H2BHQ93079 126 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 C11orf52Q96A22 123 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST1H2BNQ99877 126 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HIST1H2BMQ99879 126 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 UPK3BQ9BT76 320 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 UBE2D4Q9Y2X8 147 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 PYGO1Q9Y3Y4 419 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 KIF25-AS1Q9Y6Z4 181 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 PCLOQ9Y6V0 5065 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 A8MTW9 85 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 TSHBP01222 138 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 IFITM1P13164 125 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 ORMDL2Q53FV1 153 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 SFTA2Q6UW10 78 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 ANKRD29Q8N6D5 301 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 LINC00612Q8N6U2 182 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 RNF185Q96GF1 192 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 CDC42SE2Q9NRR3 84 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 PLECQ15149 4684 aaKnown RBP1.62□□□□□ -2.15
PRPF39-205ENST00000554081 IGHV3OR16-9A0A0B4J2B5 98 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 TRBV7-6A0A0J9YX20 115 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 K7EMI3 77 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 TRGC2P03986 189 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 HINT1P49773 126 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-205ENST00000554081 C9orf153Q5TBE3 101 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 C9orf163Q8N9P6 203 aa1.62□□□□□ -2.15
PRPF39-205ENST00000554081 IGKV2D-26A0A0A0MRZ7 120 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 LEPROTL1O95214 131 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 LGALS3P17931 250 aaKnown RBP1.61□□□□□ -2.15
PRPF39-205ENST00000554081 HERVK_113P63121 156 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 Q1RN00 199 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 C3orf22Q8N5N4 141 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 DIRC1Q969H9 104 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 NXT2Q9NPJ8 142 aaKnown RBP1.61□□□□□ -2.15
PRPF39-205ENST00000554081 ETDCA0A1B0GVM5 59 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 A0A1W2PNN7 141 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 H0Y9J4 135 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 SLPIP03973 132 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 CRYGAP11844 174 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 SPINK6Q6UWN8 80 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 NTN5Q8WTR8 489 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-205ENST00000554081 CHCHD7Q9BUK0 85 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 TIMM21Q9BVV7 248 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 IMUPQ9GZP8 106 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 PAM16Q9Y3D7 125 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 FRAS1Q86XX4 4008 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 IGLV4-3A0A075B6K6 122 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 FAM236AA0A1B0GUQ0 79 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 FAM236BA0A1B0GV22 79 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 SERF1AO75920 110 aa1.61□□□□□ -2.15
PRPF39-205ENST00000554081 Q6ZRN7 208 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-205ENST00000554081 NDUFC2-KCTD14E9PQ53 114 aa1.6□□□□□ -2.15
PRPF39-205ENST00000554081 F8W1H4 67 aa1.6□□□□□ -2.15
PRPF39-205ENST00000554081 UQCRQO14949 82 aa1.6□□□□□ -2.15
PRPF39-205ENST00000554081 MT-ATP8P03928 68 aa1.6□□□□□ -2.15
PRPF39-205ENST00000554081 SMIM13P0DJ93 91 aa1.6□□□□□ -2.15
PRPF39-205ENST00000554081 IGLC3P0DOY3 106 aa1.6□□□□□ -2.15
PRPF39-205ENST00000554081 POLR2KP53803 58 aaKnown RBP1.6□□□□□ -2.15
PRPF39-205ENST00000554081 REG3GQ6UW15 175 aa1.6□□□□□ -2.15
PRPF39-205ENST00000554081 SDIM1Q6ZPB5 146 aa1.6□□□□□ -2.15
PRPF39-205ENST00000554081 Q6ZRP5 223 aa1.6□□□□□ -2.15
PRPF39-205ENST00000554081 ATP5L2Q7Z4Y8 100 aa1.6□□□□□ -2.15
PRPF39-205ENST00000554081 KTN1-AS1Q86SY8 53 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms