RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.58□□□□□ -1.2
CHGA-203ENST00000553866 HIST1H2BHQ93079 126 aa7.58□□□□□ -1.2
CHGA-203ENST00000553866 HIST1H2BNQ99877 126 aa7.58□□□□□ -1.2
CHGA-203ENST00000553866 HIST1H2BMQ99879 126 aa7.58□□□□□ -1.2
CHGA-203ENST00000553866 ZNF861PO60384 105 aa7.57□□□□□ -1.2
CHGA-203ENST00000553866 LINC00158P58513 81 aa7.57□□□□□ -1.2
CHGA-203ENST00000553866 UBR4Q5T4S7 5183 aa7.57□□□□□ -1.2
CHGA-203ENST00000553866 IGKV2-28A0A075B6P5 120 aa7.56□□□□□ -1.2
CHGA-203ENST00000553866 IGKV2D-28P01615 120 aa7.56□□□□□ -1.2
CHGA-203ENST00000553866 SMIM13P0DJ93 91 aa7.56□□□□□ -1.2
CHGA-203ENST00000553866 NKAPP1Q8N9T2 125 aa7.56□□□□□ -1.2
CHGA-203ENST00000553866 HSPB8Q9UJY1 196 aa7.56□□□□□ -1.2
CHGA-203ENST00000553866 BCE1O60756 84 aa7.55□□□□□ -1.2
CHGA-203ENST00000553866 IGLV1-50A0A075B6I6 118 aa7.54□□□□□ -1.2
CHGA-203ENST00000553866 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
CHGA-203ENST00000553866 KRTAP13-1Q8IUC0 172 aa7.54□□□□□ -1.2
CHGA-203ENST00000553866 NDUFA12Q9UI09 145 aa7.54□□□□□ -1.2
CHGA-203ENST00000553866 TMEM238C9JI98 176 aa7.53□□□□□ -1.2
CHGA-203ENST00000553866 LEPROTO15243 131 aa7.53□□□□□ -1.2
CHGA-203ENST00000553866 DPM2O94777 84 aa7.53□□□□□ -1.2
CHGA-203ENST00000553866 IGKCP01834 107 aa7.53□□□□□ -1.2
CHGA-203ENST00000553866 PLNP26678 52 aa7.53□□□□□ -1.2
CHGA-203ENST00000553866 MEIG1Q5JSS6 88 aa7.52□□□□□ -1.21
CHGA-203ENST00000553866 MIR7-3HGQ8N6C7 128 aa7.52□□□□□ -1.21
CHGA-203ENST00000553866 HERV-K104P63124 156 aa7.51□□□□□ -1.21
CHGA-203ENST00000553866 RPL24P83731 157 aaKnown RBP7.51□□□□□ -1.21
CHGA-203ENST00000553866 MAP1LC3CQ9BXW4 147 aa7.51□□□□□ -1.21
CHGA-203ENST00000553866 MYMXA0A1B0GTQ4 84 aa7.5□□□□□ -1.21
CHGA-203ENST00000553866 SYS1-DBNDD2H3BUS1 97 aa7.5□□□□□ -1.21
CHGA-203ENST00000553866 J3QQQ9 107 aa7.5□□□□□ -1.21
CHGA-203ENST00000553866 M0R378 163 aa7.5□□□□□ -1.21
CHGA-203ENST00000553866 RPL28P46779 137 aaKnown RBP7.5□□□□□ -1.21
CHGA-203ENST00000553866 DAND5Q8N907 189 aa7.5□□□□□ -1.21
CHGA-203ENST00000553866 PLEKHB2Q96CS7 222 aa7.5□□□□□ -1.21
CHGA-203ENST00000553866 TMEM126AQ9H061 195 aa7.5□□□□□ -1.21
CHGA-203ENST00000553866 ANAPC11Q9NYG5 84 aa7.5□□□□□ -1.21
CHGA-203ENST00000553866 PRLHP81277 87 aa7.49□□□□□ -1.21
CHGA-203ENST00000553866 A0A087X002 238 aa7.48□□□□□ -1.21
CHGA-203ENST00000553866 NCR3O14931 201 aa7.48□□□□□ -1.21
CHGA-203ENST00000553866 UBE2AP49459 152 aa7.48□□□□□ -1.21
CHGA-203ENST00000553866 BOD1L2Q8IYS8 172 aa7.48□□□□□ -1.21
CHGA-203ENST00000553866 LRP2P98164 4655 aa7.48□□□□□ -1.21
CHGA-203ENST00000553866 ATP6V1G1O75348 118 aa7.47□□□□□ -1.21
CHGA-203ENST00000553866 HERVK_113P61574 105 aa7.47□□□□□ -1.21
CHGA-203ENST00000553866 COA6Q5JTJ3 125 aaKnown RBP7.47□□□□□ -1.21
CHGA-203ENST00000553866 FAM19A1Q7Z5A9 133 aa7.47□□□□□ -1.21
CHGA-203ENST00000553866 E9PLD3 99 aa7.46□□□□□ -1.22
CHGA-203ENST00000553866 EIF4EBP3O60516 100 aaPredicted RBP7.46□□□□□ -1.22
CHGA-203ENST00000553866 C3orf79P0CE67 100 aa7.46□□□□□ -1.22
CHGA-203ENST00000553866 LGALS3P17931 250 aaKnown RBP7.46□□□□□ -1.22
CHGA-203ENST00000553866 LINC01545Q5VT33 79 aa7.46□□□□□ -1.22
CHGA-203ENST00000553866 A0A0J9YXY3 114 aa7.44□□□□□ -1.22
CHGA-203ENST00000553866 LINC00587B1AMM8 73 aa7.44□□□□□ -1.22
CHGA-203ENST00000553866 NMUP48645 174 aa7.44□□□□□ -1.22
CHGA-203ENST00000553866 KRTAP13-2Q52LG2 175 aa7.44□□□□□ -1.22
CHGA-203ENST00000553866 ADAMTSL4-AS1Q5T5F5 129 aa7.44□□□□□ -1.22
CHGA-203ENST00000553866 PET117Q6UWS5 81 aa7.44□□□□□ -1.22
CHGA-203ENST00000553866 SOSTDC1Q6X4U4 206 aa7.44□□□□□ -1.22
CHGA-203ENST00000553866 IGKV2D-26A0A0A0MRZ7 120 aa7.43□□□□□ -1.22
CHGA-203ENST00000553866 LOC107984156A0A0G2JMH3 177 aa7.43□□□□□ -1.22
CHGA-203ENST00000553866 ARL17AQ8IVW1 177 aa7.43□□□□□ -1.22
CHGA-203ENST00000553866 TTTY13Q9BZ97 58 aa7.43□□□□□ -1.22
CHGA-203ENST00000553866 TRBV10-3A0A0K0K1G6 114 aa7.42□□□□□ -1.22
CHGA-203ENST00000553866 RPL13AP40429 203 aaKnown RBP7.42□□□□□ -1.22
CHGA-203ENST00000553866 NPC2P61916 151 aa7.42□□□□□ -1.22
CHGA-203ENST00000553866 LPAP08519 4548 aa7.41□□□□□ -1.22
CHGA-203ENST00000553866 KRTAP4-16G5E9R7 235 aaPredicted RBP7.41□□□□□ -1.22
CHGA-203ENST00000553866 SPRR1AP35321 89 aa7.41□□□□□ -1.22
CHGA-203ENST00000553866 KRTDAPP60985 99 aa7.41□□□□□ -1.22
CHGA-203ENST00000553866 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
CHGA-203ENST00000553866 PRYO14603 147 aa7.4□□□□□ -1.22
CHGA-203ENST00000553866 CRYGAP11844 174 aa7.4□□□□□ -1.22
CHGA-203ENST00000553866 LITAFQ99732 161 aa7.4□□□□□ -1.22
CHGA-203ENST00000553866 HIGD2AQ9BW72 106 aa7.4□□□□□ -1.22
CHGA-203ENST00000553866 RNF213Q63HN8 5207 aa7.39□□□□□ -1.23
CHGA-203ENST00000553866 TYMSOSQ8TAI1 123 aa7.39□□□□□ -1.23
CHGA-203ENST00000553866 TSPAN13O95857 204 aa7.38□□□□□ -1.23
CHGA-203ENST00000553866 ATOH7Q8N100 152 aa7.38□□□□□ -1.23
CHGA-203ENST00000553866 TRBV10-2A0A0K0K1G8 114 aa7.37□□□□□ -1.23
CHGA-203ENST00000553866 NDUFC2O95298 119 aa7.37□□□□□ -1.23
CHGA-203ENST00000553866 S100A1P23297 94 aa7.37□□□□□ -1.23
CHGA-203ENST00000553866 DDTP30046 118 aa7.37□□□□□ -1.23
CHGA-203ENST00000553866 FAM229BQ4G0N7 80 aa7.37□□□□□ -1.23
CHGA-203ENST00000553866 ANKRD39Q53RE8 183 aa7.37□□□□□ -1.23
CHGA-203ENST00000553866 LINC00337Q8N6G1 96 aa7.37□□□□□ -1.23
CHGA-203ENST00000553866 ZNF815PA8K554 130 aa7.36□□□□□ -1.23
CHGA-203ENST00000553866 C3orf22Q8N5N4 141 aa7.36□□□□□ -1.23
CHGA-203ENST00000553866 SMCR5Q8TEV8 140 aa7.36□□□□□ -1.23
CHGA-203ENST00000553866 SPRR4Q96PI1 79 aa7.36□□□□□ -1.23
CHGA-203ENST00000553866 MIEN1Q9BRT3 115 aa7.36□□□□□ -1.23
CHGA-203ENST00000553866 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
CHGA-203ENST00000553866 ETDCA0A1B0GVM5 59 aa7.35□□□□□ -1.23
CHGA-203ENST00000553866 B5MCH6 92 aa7.35□□□□□ -1.23
CHGA-203ENST00000553866 IGLV6-57P01721 117 aa7.35□□□□□ -1.23
CHGA-203ENST00000553866 HIST3H2BBQ8N257 126 aa7.35□□□□□ -1.23
CHGA-203ENST00000553866 LINC00308Q8TCZ7 52 aa7.35□□□□□ -1.23
CHGA-203ENST00000553866 TIMM17BO60830 172 aa7.34□□□□□ -1.23
CHGA-203ENST00000553866 ERC2-IT1O76042 136 aa7.34□□□□□ -1.23
CHGA-203ENST00000553866 HIST1H2BLQ99880 126 aa7.33□□□□□ -1.24
CHGA-203ENST00000553866 S100A7L2Q5SY68 101 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms