RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 LEPROTL1O95214 131 aa12.11□□□□□ -0.47
PRAF2-202ENST00000553851 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
PRAF2-202ENST00000553851 RPL28P46779 137 aaKnown RBP12.1□□□□□ -0.47
PRAF2-202ENST00000553851 COX17Q14061 63 aa12.1□□□□□ -0.47
PRAF2-202ENST00000553851 SND1-IT1Q9HBX3 110 aa12.1□□□□□ -0.47
PRAF2-202ENST00000553851 HSPB8Q9UJY1 196 aa12.1□□□□□ -0.47
PRAF2-202ENST00000553851 SFTA2Q6UW10 78 aa12.08□□□□□ -0.48
PRAF2-202ENST00000553851 TMEM223A0PJW6 202 aa12.06□□□□□ -0.48
PRAF2-202ENST00000553851 RPL13AP40429 203 aaKnown RBP12.06□□□□□ -0.48
PRAF2-202ENST00000553851 IGKV2-28A0A075B6P5 120 aa12.05□□□□□ -0.48
PRAF2-202ENST00000553851 IGKV2D-28P01615 120 aa12.05□□□□□ -0.48
PRAF2-202ENST00000553851 VPREB1P12018 145 aa12.05□□□□□ -0.48
PRAF2-202ENST00000553851 FABP4P15090 132 aa12.05□□□□□ -0.48
PRAF2-202ENST00000553851 RPL24P83731 157 aaKnown RBP12.04□□□□□ -0.48
PRAF2-202ENST00000553851 S100A6P06703 90 aa12.02□□□□□ -0.49
PRAF2-202ENST00000553851 UBE2AP49459 152 aa12.02□□□□□ -0.49
PRAF2-202ENST00000553851 LINC00158P58513 81 aa12.02□□□□□ -0.49
PRAF2-202ENST00000553851 Q8NDZ9 215 aa12.01□□□□□ -0.49
PRAF2-202ENST00000553851 MAP1LC3CQ9BXW4 147 aa12.01□□□□□ -0.49
PRAF2-202ENST00000553851 A0A0U1RRA0 63 aa12□□□□□ -0.49
PRAF2-202ENST00000553851 H0Y8G0 127 aa12□□□□□ -0.49
PRAF2-202ENST00000553851 KRTAP13-1Q8IUC0 172 aa12□□□□□ -0.49
PRAF2-202ENST00000553851 TMEM238C9JI98 176 aa11.97□□□□□ -0.49
PRAF2-202ENST00000553851 A0A087X002 238 aa11.96□□□□□ -0.49
PRAF2-202ENST00000553851 SMIM13P0DJ93 91 aa11.96□□□□□ -0.49
PRAF2-202ENST00000553851 TMEM126AQ9H061 195 aa11.96□□□□□ -0.49
PRAF2-202ENST00000553851 SYS1-DBNDD2H3BUS1 97 aa11.95□□□□□ -0.5
PRAF2-202ENST00000553851 CRYGAP11844 174 aa11.95□□□□□ -0.5
PRAF2-202ENST00000553851 HIST3H2BBQ8N257 126 aa11.95□□□□□ -0.5
PRAF2-202ENST00000553851 ANAPC11Q9NYG5 84 aa11.95□□□□□ -0.5
PRAF2-202ENST00000553851 S100A2P29034 98 aa11.94□□□□□ -0.5
PRAF2-202ENST00000553851 PRLHP81277 87 aa11.94□□□□□ -0.5
PRAF2-202ENST00000553851 MEIG1Q5JSS6 88 aa11.94□□□□□ -0.5
PRAF2-202ENST00000553851 FAM19A1Q7Z5A9 133 aa11.94□□□□□ -0.5
PRAF2-202ENST00000553851 LPAP08519 4548 aa11.94□□□□□ -0.5
PRAF2-202ENST00000553851 M0R378 163 aa11.93□□□□□ -0.5
PRAF2-202ENST00000553851 PLNP26678 52 aa11.93□□□□□ -0.5
PRAF2-202ENST00000553851 HERV-K104P63124 156 aa11.93□□□□□ -0.5
PRAF2-202ENST00000553851 PET117Q6UWS5 81 aa11.93□□□□□ -0.5
PRAF2-202ENST00000553851 SNRPEP62304 92 aaKnown RBP11.92□□□□□ -0.5
PRAF2-202ENST00000553851 TYMSOSQ8TAI1 123 aa11.92□□□□□ -0.5
PRAF2-202ENST00000553851 NDUFA12Q9UI09 145 aa11.92□□□□□ -0.5
PRAF2-202ENST00000553851 C5orf52A6NGY3 159 aa11.91□□□□□ -0.5
PRAF2-202ENST00000553851 DPM2O94777 84 aa11.91□□□□□ -0.5
PRAF2-202ENST00000553851 C3orf79P0CE67 100 aa11.91□□□□□ -0.5
PRAF2-202ENST00000553851 MIR7-3HGQ8N6C7 128 aa11.91□□□□□ -0.5
PRAF2-202ENST00000553851 MYMXA0A1B0GTQ4 84 aa11.9□□□□□ -0.5
PRAF2-202ENST00000553851 BOD1L2Q8IYS8 172 aa11.9□□□□□ -0.5
PRAF2-202ENST00000553851 HIST1H2BLQ99880 126 aa11.9□□□□□ -0.5
PRAF2-202ENST00000553851 RNF213Q63HN8 5207 aa11.9□□□□□ -0.5
PRAF2-202ENST00000553851 LINC00587B1AMM8 73 aa11.89□□□□□ -0.51
PRAF2-202ENST00000553851 TSPAN13O95857 204 aa11.89□□□□□ -0.51
PRAF2-202ENST00000553851 KRTDAPP60985 99 aa11.89□□□□□ -0.51
PRAF2-202ENST00000553851 LINC01545Q5VT33 79 aa11.89□□□□□ -0.51
PRAF2-202ENST00000553851 LEPROTO15243 131 aa11.88□□□□□ -0.51
PRAF2-202ENST00000553851 IGKCP01834 107 aa11.88□□□□□ -0.51
PRAF2-202ENST00000553851 TSPEAR-AS2P59090 65 aa11.87□□□□□ -0.51
PRAF2-202ENST00000553851 PRR4Q16378 134 aa11.87□□□□□ -0.51
PRAF2-202ENST00000553851 FAM229BQ4G0N7 80 aa11.87□□□□□ -0.51
PRAF2-202ENST00000553851 KRTAP13-2Q52LG2 175 aa11.87□□□□□ -0.51
PRAF2-202ENST00000553851 PLEKHB2Q96CS7 222 aa11.87□□□□□ -0.51
PRAF2-202ENST00000553851 PMCHL2Q9BQD1 86 aa11.87□□□□□ -0.51
PRAF2-202ENST00000553851 C20orf202A1L168 122 aa11.86□□□□□ -0.51
PRAF2-202ENST00000553851 AKR1D1P51857 326 aa11.86□□□□□ -0.51
PRAF2-202ENST00000553851 NCR3O14931 201 aa11.85□□□□□ -0.51
PRAF2-202ENST00000553851 J3QQQ9 107 aa11.84□□□□□ -0.51
PRAF2-202ENST00000553851 HERVK_113P61574 105 aa11.84□□□□□ -0.51
PRAF2-202ENST00000553851 HIGD2AQ9BW72 106 aa11.83□□□□□ -0.52
PRAF2-202ENST00000553851 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
PRAF2-202ENST00000553851 PRYO14603 147 aa11.82□□□□□ -0.52
PRAF2-202ENST00000553851 DAND5Q8N907 189 aa11.82□□□□□ -0.52
PRAF2-202ENST00000553851 LGALS3P17931 250 aaKnown RBP11.8□□□□□ -0.52
PRAF2-202ENST00000553851 NMUP48645 174 aa11.8□□□□□ -0.52
PRAF2-202ENST00000553851 KCNQ1DNQ9H478 68 aa11.8□□□□□ -0.52
PRAF2-202ENST00000553851 TMA7Q9Y2S6 64 aaKnown RBP11.8□□□□□ -0.52
PRAF2-202ENST00000553851 LOC107984156A0A0G2JMH3 177 aa11.78□□□□□ -0.52
PRAF2-202ENST00000553851 TRBV10-3A0A0K0K1G6 114 aa11.78□□□□□ -0.52
PRAF2-202ENST00000553851 ARL17AQ8IVW1 177 aa11.78□□□□□ -0.52
PRAF2-202ENST00000553851 LINC00304Q8N9R0 145 aa11.78□□□□□ -0.52
PRAF2-202ENST00000553851 SPRR1AP35321 89 aa11.77□□□□□ -0.53
PRAF2-202ENST00000553851 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.53
PRAF2-202ENST00000553851 SPRR4Q96PI1 79 aa11.76□□□□□ -0.53
PRAF2-202ENST00000553851 ETDCA0A1B0GVM5 59 aa11.75□□□□□ -0.53
PRAF2-202ENST00000553851 E9PLD3 99 aa11.75□□□□□ -0.53
PRAF2-202ENST00000553851 C3orf22Q8N5N4 141 aa11.75□□□□□ -0.53
PRAF2-202ENST00000553851 KRTAP4-16G5E9R7 235 aaPredicted RBP11.74□□□□□ -0.53
PRAF2-202ENST00000553851 S100A12P80511 92 aa11.73□□□□□ -0.53
PRAF2-202ENST00000553851 SMCR5Q8TEV8 140 aa11.73□□□□□ -0.53
PRAF2-202ENST00000553851 MIEN1Q9BRT3 115 aa11.73□□□□□ -0.53
PRAF2-202ENST00000553851 ZNF706Q9Y5V0 76 aaPredicted RBP11.73□□□□□ -0.53
PRAF2-202ENST00000553851 TRBV10-2A0A0K0K1G8 114 aa11.72□□□□□ -0.53
PRAF2-202ENST00000553851 DDTP30046 118 aa11.72□□□□□ -0.53
PRAF2-202ENST00000553851 A0A0J9YXY3 114 aa11.7□□□□□ -0.54
PRAF2-202ENST00000553851 SCGB1D1O95968 90 aa11.7□□□□□ -0.54
PRAF2-202ENST00000553851 ATOH7Q8N100 152 aa11.7□□□□□ -0.54
PRAF2-202ENST00000553851 SPANXB1Q9NS25 103 aaPredicted RBP11.7□□□□□ -0.54
PRAF2-202ENST00000553851 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
PRAF2-202ENST00000553851 B5MCH6 92 aa11.68□□□□□ -0.54
PRAF2-202ENST00000553851 NDUFC2O95298 119 aa11.68□□□□□ -0.54
PRAF2-202ENST00000553851 NPC2P61916 151 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms