RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 RPL37AP8A6NKH3 93 aa12.34□□□□□ -0.43
FOXA1-203ENST00000553751 DPM2O94777 84 aa12.34□□□□□ -0.43
FOXA1-203ENST00000553751 VPREB1P12018 145 aa12.34□□□□□ -0.43
FOXA1-203ENST00000553751 KRTAP10-8P60410 259 aa12.34□□□□□ -0.43
FOXA1-203ENST00000553751 TSPEAR-AS2P59090 65 aa12.33□□□□□ -0.44
FOXA1-203ENST00000553751 Q8NDZ9 215 aa12.33□□□□□ -0.44
FOXA1-203ENST00000553751 MAP1LC3CQ9BXW4 147 aa12.33□□□□□ -0.44
FOXA1-203ENST00000553751 LINC00158P58513 81 aa12.32□□□□□ -0.44
FOXA1-203ENST00000553751 NDUFA12Q9UI09 145 aa12.32□□□□□ -0.44
FOXA1-203ENST00000553751 IGKCP01834 107 aa12.31□□□□□ -0.44
FOXA1-203ENST00000553751 HERV-K104P63124 156 aa12.31□□□□□ -0.44
FOXA1-203ENST00000553751 A0A0U1RRA0 63 aa12.3□□□□□ -0.44
FOXA1-203ENST00000553751 LEPROTO15243 131 aa12.3□□□□□ -0.44
FOXA1-203ENST00000553751 ZNF861PO60384 105 aa12.3□□□□□ -0.44
FOXA1-203ENST00000553751 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
FOXA1-203ENST00000553751 BCE1O60756 84 aa12.29□□□□□ -0.44
FOXA1-203ENST00000553751 RPL24P83731 157 aaKnown RBP12.29□□□□□ -0.44
FOXA1-203ENST00000553751 MEIG1Q5JSS6 88 aa12.29□□□□□ -0.44
FOXA1-203ENST00000553751 IGKV2-28A0A075B6P5 120 aa12.28□□□□□ -0.44
FOXA1-203ENST00000553751 MYMXA0A1B0GTQ4 84 aa12.28□□□□□ -0.44
FOXA1-203ENST00000553751 SYS1-DBNDD2H3BUS1 97 aa12.28□□□□□ -0.44
FOXA1-203ENST00000553751 IGKV2D-28P01615 120 aa12.28□□□□□ -0.44
FOXA1-203ENST00000553751 KRTAP1-4P0C5Y4 121 aa12.28□□□□□ -0.44
FOXA1-203ENST00000553751 PLEKHB2Q96CS7 222 aa12.28□□□□□ -0.44
FOXA1-203ENST00000553751 HERVK_113P61574 105 aa12.27□□□□□ -0.45
FOXA1-203ENST00000553751 COA6Q5JTJ3 125 aaKnown RBP12.27□□□□□ -0.45
FOXA1-203ENST00000553751 IGLV1-50A0A075B6I6 118 aa12.26□□□□□ -0.45
FOXA1-203ENST00000553751 J3QQQ9 107 aa12.26□□□□□ -0.45
FOXA1-203ENST00000553751 MIR7-3HGQ8N6C7 128 aa12.25□□□□□ -0.45
FOXA1-203ENST00000553751 LINC00587B1AMM8 73 aa12.24□□□□□ -0.45
FOXA1-203ENST00000553751 ATP6V1G1O75348 118 aa12.24□□□□□ -0.45
FOXA1-203ENST00000553751 RPL28P46779 137 aaKnown RBP12.24□□□□□ -0.45
FOXA1-203ENST00000553751 NMUP48645 174 aa12.23□□□□□ -0.45
FOXA1-203ENST00000553751 KRTAP13-1Q8IUC0 172 aa12.23□□□□□ -0.45
FOXA1-203ENST00000553751 PRR26Q8N8Z3 221 aa12.23□□□□□ -0.45
FOXA1-203ENST00000553751 LGALS3P17931 250 aaKnown RBP12.22□□□□□ -0.45
FOXA1-203ENST00000553751 LINC01545Q5VT33 79 aa12.22□□□□□ -0.45
FOXA1-203ENST00000553751 PET117Q6UWS5 81 aa12.21□□□□□ -0.45
FOXA1-203ENST00000553751 TMEM238C9JI98 176 aa12.2□□□□□ -0.46
FOXA1-203ENST00000553751 E9PLD3 99 aa12.2□□□□□ -0.46
FOXA1-203ENST00000553751 S100A1P23297 94 aa12.2□□□□□ -0.46
FOXA1-203ENST00000553751 BOD1L2Q8IYS8 172 aa12.2□□□□□ -0.46
FOXA1-203ENST00000553751 TMEM126AQ9H061 195 aa12.2□□□□□ -0.46
FOXA1-203ENST00000553751 C3orf79P0CE67 100 aa12.19□□□□□ -0.46
FOXA1-203ENST00000553751 DAND5Q8N907 189 aa12.19□□□□□ -0.46
FOXA1-203ENST00000553751 M0R378 163 aa12.18□□□□□ -0.46
FOXA1-203ENST00000553751 UBE2AP49459 152 aa12.18□□□□□ -0.46
FOXA1-203ENST00000553751 NCR3O14931 201 aa12.16□□□□□ -0.46
FOXA1-203ENST00000553751 LOC107984156A0A0G2JMH3 177 aa12.15□□□□□ -0.46
FOXA1-203ENST00000553751 PRLHP81277 87 aa12.15□□□□□ -0.46
FOXA1-203ENST00000553751 ARL17AQ8IVW1 177 aa12.15□□□□□ -0.46
FOXA1-203ENST00000553751 IGKV2D-26A0A0A0MRZ7 120 aa12.14□□□□□ -0.47
FOXA1-203ENST00000553751 KRTDAPP60985 99 aa12.14□□□□□ -0.47
FOXA1-203ENST00000553751 FAM19A1Q7Z5A9 133 aa12.14□□□□□ -0.47
FOXA1-203ENST00000553751 UBR4Q5T4S7 5183 aa12.14□□□□□ -0.47
FOXA1-203ENST00000553751 A0A0J9YXY3 114 aa12.13□□□□□ -0.47
FOXA1-203ENST00000553751 RPL13AP40429 203 aaKnown RBP12.12□□□□□ -0.47
FOXA1-203ENST00000553751 A0A087X002 238 aa12.09□□□□□ -0.47
FOXA1-203ENST00000553751 PRYO14603 147 aa12.09□□□□□ -0.47
FOXA1-203ENST00000553751 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
FOXA1-203ENST00000553751 TRBV10-3A0A0K0K1G6 114 aa12.08□□□□□ -0.48
FOXA1-203ENST00000553751 MIEN1Q9BRT3 115 aa12.08□□□□□ -0.48
FOXA1-203ENST00000553751 KCNQ1DNQ9H478 68 aa12.08□□□□□ -0.48
FOXA1-203ENST00000553751 C20orf202A1L168 122 aa12.07□□□□□ -0.48
FOXA1-203ENST00000553751 EIF4EBP3O60516 100 aaPredicted RBP12.07□□□□□ -0.48
FOXA1-203ENST00000553751 SPRR1AP35321 89 aa12.07□□□□□ -0.48
FOXA1-203ENST00000553751 SOSTDC1Q6X4U4 206 aa12.07□□□□□ -0.48
FOXA1-203ENST00000553751 LITAFQ99732 161 aa12.07□□□□□ -0.48
FOXA1-203ENST00000553751 TRBV10-2A0A0K0K1G8 114 aa12.06□□□□□ -0.48
FOXA1-203ENST00000553751 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
FOXA1-203ENST00000553751 SPANXB1Q9NS25 103 aaPredicted RBP12.06□□□□□ -0.48
FOXA1-203ENST00000553751 ANAPC11Q9NYG5 84 aa12.06□□□□□ -0.48
FOXA1-203ENST00000553751 NDUFC2O95298 119 aa12.05□□□□□ -0.48
FOXA1-203ENST00000553751 NPC2P61916 151 aa12.05□□□□□ -0.48
FOXA1-203ENST00000553751 ZNF815PA8K554 130 aa12.04□□□□□ -0.48
FOXA1-203ENST00000553751 KRTAP4-16G5E9R7 235 aaPredicted RBP12.04□□□□□ -0.48
FOXA1-203ENST00000553751 CRYGAP11844 174 aa12.04□□□□□ -0.48
FOXA1-203ENST00000553751 HIST3H2BBQ8N257 126 aa12.04□□□□□ -0.48
FOXA1-203ENST00000553751 LINC00337Q8N6G1 96 aa12.04□□□□□ -0.48
FOXA1-203ENST00000553751 TIMM17BO60830 172 aa12.03□□□□□ -0.48
FOXA1-203ENST00000553751 HIGD2AQ9BW72 106 aa12.03□□□□□ -0.48
FOXA1-203ENST00000553751 LRP2P98164 4655 aa12.03□□□□□ -0.48
FOXA1-203ENST00000553751 DDTP30046 118 aa12.02□□□□□ -0.49
FOXA1-203ENST00000553751 FAM229BQ4G0N7 80 aa12.02□□□□□ -0.49
FOXA1-203ENST00000553751 ATOH7Q8N100 152 aa12.02□□□□□ -0.49
FOXA1-203ENST00000553751 HIST1H2BLQ99880 126 aa12.02□□□□□ -0.49
FOXA1-203ENST00000553751 KRTAP13-2Q52LG2 175 aa12.01□□□□□ -0.49
FOXA1-203ENST00000553751 ANKRD39Q53RE8 183 aa12.01□□□□□ -0.49
FOXA1-203ENST00000553751 IGLV6-57P01721 117 aa12□□□□□ -0.49
FOXA1-203ENST00000553751 LINC00308Q8TCZ7 52 aa12□□□□□ -0.49
FOXA1-203ENST00000553751 ETDCA0A1B0GVM5 59 aa11.99□□□□□ -0.49
FOXA1-203ENST00000553751 S100A12P80511 92 aa11.99□□□□□ -0.49
FOXA1-203ENST00000553751 S100A2P29034 98 aa11.98□□□□□ -0.49
FOXA1-203ENST00000553751 AKR1D1P51857 326 aa11.98□□□□□ -0.49
FOXA1-203ENST00000553751 TYMSOSQ8TAI1 123 aa11.98□□□□□ -0.49
FOXA1-203ENST00000553751 S100A7L2Q5SY68 101 aa11.97□□□□□ -0.49
FOXA1-203ENST00000553751 SPRR4Q96PI1 79 aa11.96□□□□□ -0.49
FOXA1-203ENST00000553751 SPANXCQ9NY87 97 aa11.96□□□□□ -0.49
FOXA1-203ENST00000553751 B5MCH6 92 aa11.95□□□□□ -0.5
FOXA1-203ENST00000553751 S100A6P06703 90 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms