RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 BIRC6Q9NR09 4857 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 A0A096LNI7 61 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 LOC105371267A0A1B0GV96 52 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 FAM168BA1KXE4 195 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 PANO1I0J062 215 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST1H2BKO60814 126 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 ATP5LO75964 103 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST1H2BJP06899 126 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 SPINK8P0C7L1 97 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST1H2BOP23527 126 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 S100A2P29034 98 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST1H2BBP33778 126 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 AKR1D1P51857 326 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST1H2BDP58876 126 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST1H2BCP62807 126 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST2H2BEQ16778 126 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 C9orf116Q5BN46 136 aaPredicted RBP2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.95□□□□□ -1.94
ATXN3-222ENST00000553570 TMEM170BQ5T4T1 132 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 LINC00173Q6ZV60 143 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 OR10D4PQ8NGN7 298 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST1H2BHQ93079 126 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST1H2BNQ99877 126 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 HIST1H2BMQ99879 126 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 PPDPFQ9H3Y8 114 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 CDKN2A-AS1Q9UH64 79 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 PKIGQ9Y2B9 76 aa2.95□□□□□ -1.94
ATXN3-222ENST00000553570 TINCRA0A1B0GVN0 87 aa2.94□□□□□ -1.94
ATXN3-222ENST00000553570 LINC01546A6NGU7 62 aa2.94□□□□□ -1.94
ATXN3-222ENST00000553570 H3BRM9 83 aa2.94□□□□□ -1.94
ATXN3-222ENST00000553570 SMIM6P0DI80 62 aa2.94□□□□□ -1.94
ATXN3-222ENST00000553570 RPL37AP61513 92 aaKnown RBP2.94□□□□□ -1.94
ATXN3-222ENST00000553570 COX7B2Q8TF08 81 aa2.94□□□□□ -1.94
ATXN3-222ENST00000553570 C7orf33Q8WU49 177 aa2.94□□□□□ -1.94
ATXN3-222ENST00000553570 IFI27L1Q96BM0 104 aa2.94□□□□□ -1.94
ATXN3-222ENST00000553570 CHCHD1Q96BP2 118 aaKnown RBP2.94□□□□□ -1.94
ATXN3-222ENST00000553570 LINC00474Q9P2X8 69 aa2.94□□□□□ -1.94
ATXN3-222ENST00000553570 CHTOPQ9Y3Y2 248 aaKnown RBP2.94□□□□□ -1.94
ATXN3-222ENST00000553570 HECTD4Q9Y4D8 3996 aa2.94□□□□□ -1.94
ATXN3-222ENST00000553570 DNAH2Q9P225 4427 aa2.94□□□□□ -1.94
ATXN3-222ENST00000553570 IGLV8-61A0A075B6I0 122 aa2.93□□□□□ -1.94
ATXN3-222ENST00000553570 SERF1AO75920 110 aa2.93□□□□□ -1.94
ATXN3-222ENST00000553570 LEPROTL1O95214 131 aa2.93□□□□□ -1.94
ATXN3-222ENST00000553570 PFN2P35080 140 aa2.93□□□□□ -1.94
ATXN3-222ENST00000553570 PRR4Q16378 134 aa2.93□□□□□ -1.94
ATXN3-222ENST00000553570 PDZD11Q5EBL8 140 aa2.93□□□□□ -1.94
ATXN3-222ENST00000553570 COA6Q5JTJ3 125 aaKnown RBP2.93□□□□□ -1.94
ATXN3-222ENST00000553570 Q6ZSA8 131 aa2.93□□□□□ -1.94
ATXN3-222ENST00000553570 FAM19A5Q7Z5A7 132 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-222ENST00000553570 ZNF625Q96I27 306 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-222ENST00000553570 C6orf48Q9UBA6 75 aa2.93□□□□□ -1.94
ATXN3-222ENST00000553570 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
ATXN3-222ENST00000553570 A0A096LNJ9 63 aa2.92□□□□□ -1.94
ATXN3-222ENST00000553570 NUPR1O60356 82 aa2.92□□□□□ -1.94
ATXN3-222ENST00000553570 KIAA0087Q14695 138 aa2.92□□□□□ -1.94
ATXN3-222ENST00000553570 Q8IZM0 81 aa2.92□□□□□ -1.94
ATXN3-222ENST00000553570 HIST3H2BBQ8N257 126 aa2.92□□□□□ -1.94
ATXN3-222ENST00000553570 SPACA4Q8TDM5 124 aa2.92□□□□□ -1.94
ATXN3-222ENST00000553570 XAGE1AQ9HD64 81 aa2.92□□□□□ -1.94
ATXN3-222ENST00000553570 MRPL35Q9NZE8 188 aaKnown RBP2.92□□□□□ -1.94
ATXN3-222ENST00000553570 FAT2Q9NYQ8 4349 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 TRBV30A0A0K0K1B3 111 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 A0A1W2PNN7 141 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 F8VRH5 84 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 IGLC3P0DOY3 106 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 LINC00158P58513 81 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 UBE2BP63146 152 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 PHF5AQ7RTV0 110 aaKnown RBP2.91□□□□□ -1.94
ATXN3-222ENST00000553570 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 PMCHL2Q9BQD1 86 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 MAP1LC3CQ9BXW4 147 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 PLAC8Q9NZF1 115 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 HSPB8Q9UJY1 196 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 PKHD1P08F94 4074 aa2.91□□□□□ -1.94
ATXN3-222ENST00000553570 FLG2Q5D862 2391 aaPredicted RBP2.9□□□□□ -1.94
ATXN3-222ENST00000553570 NDUFC2-KCTD14E9PQ53 114 aa2.9□□□□□ -1.95
ATXN3-222ENST00000553570 ZNF22P17026 224 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-222ENST00000553570 C1orf137Q5JT78 98 aa2.9□□□□□ -1.95
ATXN3-222ENST00000553570 C12orf57Q99622 126 aa2.9□□□□□ -1.95
ATXN3-222ENST00000553570 HIST1H2BLQ99880 126 aa2.9□□□□□ -1.95
ATXN3-222ENST00000553570 TRAV12-1A0A0B4J245 112 aa2.89□□□□□ -1.95
ATXN3-222ENST00000553570 A0A1B0GWB2 263 aa2.89□□□□□ -1.95
ATXN3-222ENST00000553570 M0QXV9 152 aa2.89□□□□□ -1.95
ATXN3-222ENST00000553570 DPM2O94777 84 aa2.89□□□□□ -1.95
ATXN3-222ENST00000553570 CXCL5P42830 114 aa2.89□□□□□ -1.95
ATXN3-222ENST00000553570 KRTDAPP60985 99 aa2.89□□□□□ -1.95
ATXN3-222ENST00000553570 CIRBPQ14011 172 aaKnown RBP2.89□□□□□ -1.95
ATXN3-222ENST00000553570 MEIG1Q5JSS6 88 aa2.89□□□□□ -1.95
ATXN3-222ENST00000553570 C9orf129Q5T035 196 aaKnown RBP2.89□□□□□ -1.95
ATXN3-222ENST00000553570 NKAPP1Q8N9T2 125 aa2.89□□□□□ -1.95
ATXN3-222ENST00000553570 SRRM2Q9UQ35 2752 aaKnown RBP2.89□□□□□ -1.95
ATXN3-222ENST00000553570 TMEM223A0PJW6 202 aa2.88□□□□□ -1.95
ATXN3-222ENST00000553570 IGKCP01834 107 aa2.88□□□□□ -1.95
ATXN3-222ENST00000553570 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
ATXN3-222ENST00000553570 LGALS3P17931 250 aaKnown RBP2.88□□□□□ -1.95
ATXN3-222ENST00000553570 HERVK_113P61574 105 aa2.88□□□□□ -1.95
ATXN3-222ENST00000553570 S100A12P80511 92 aa2.88□□□□□ -1.95
ATXN3-222ENST00000553570 PYY3Q5JQD4 70 aa2.88□□□□□ -1.95
ATXN3-222ENST00000553570 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms