RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 S100A6P06703 90 aa10.79□□□□□ -0.68
SHMT2-206ENST00000553529 PRLHP81277 87 aa10.79□□□□□ -0.68
SHMT2-206ENST00000553529 NKAPP1Q8N9T2 125 aa10.79□□□□□ -0.68
SHMT2-206ENST00000553529 CHCHD1Q96BP2 118 aaKnown RBP10.78□□□□□ -0.68
SHMT2-206ENST00000553529 HIST1H2BKO60814 126 aa10.76□□□□□ -0.69
SHMT2-206ENST00000553529 HIST1H2BJP06899 126 aa10.76□□□□□ -0.69
SHMT2-206ENST00000553529 HIST1H2BOP23527 126 aa10.76□□□□□ -0.69
SHMT2-206ENST00000553529 HIST1H2BBP33778 126 aa10.76□□□□□ -0.69
SHMT2-206ENST00000553529 HIST1H2BDP58876 126 aa10.76□□□□□ -0.69
SHMT2-206ENST00000553529 HIST1H2BCP62807 126 aa10.76□□□□□ -0.69
SHMT2-206ENST00000553529 HIST2H2BEQ16778 126 aa10.76□□□□□ -0.69
SHMT2-206ENST00000553529 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-206ENST00000553529 HIST1H2BHQ93079 126 aa10.76□□□□□ -0.69
SHMT2-206ENST00000553529 HIST1H2BNQ99877 126 aa10.76□□□□□ -0.69
SHMT2-206ENST00000553529 HIST1H2BMQ99879 126 aa10.76□□□□□ -0.69
SHMT2-206ENST00000553529 TSPAN13O95857 204 aa10.75□□□□□ -0.69
SHMT2-206ENST00000553529 RPL28P46779 137 aaKnown RBP10.75□□□□□ -0.69
SHMT2-206ENST00000553529 TRAV12-1A0A0B4J245 112 aa10.74□□□□□ -0.69
SHMT2-206ENST00000553529 SERF1AO75920 110 aa10.74□□□□□ -0.69
SHMT2-206ENST00000553529 UBE2AP49459 152 aa10.74□□□□□ -0.69
SHMT2-206ENST00000553529 LINC00158P58513 81 aa10.74□□□□□ -0.69
SHMT2-206ENST00000553529 TSPEAR-AS2P59090 65 aa10.74□□□□□ -0.69
SHMT2-206ENST00000553529 KRTAP13-2Q52LG2 175 aa10.74□□□□□ -0.69
SHMT2-206ENST00000553529 M0R378 163 aa10.73□□□□□ -0.69
SHMT2-206ENST00000553529 HSBP1O75506 76 aa10.73□□□□□ -0.69
SHMT2-206ENST00000553529 SMIM13P0DJ93 91 aa10.73□□□□□ -0.69
SHMT2-206ENST00000553529 PMCHL2Q9BQD1 86 aa10.73□□□□□ -0.69
SHMT2-206ENST00000553529 TMEM126AQ9H061 195 aa10.72□□□□□ -0.69
SHMT2-206ENST00000553529 FAM19A1Q7Z5A9 133 aa10.71□□□□□ -0.69
SHMT2-206ENST00000553529 COX17Q14061 63 aa10.7□□□□□ -0.7
SHMT2-206ENST00000553529 FABP4P15090 132 aa10.69□□□□□ -0.7
SHMT2-206ENST00000553529 RPL13AP40429 203 aaKnown RBP10.69□□□□□ -0.7
SHMT2-206ENST00000553529 NCR3O14931 201 aa10.68□□□□□ -0.7
SHMT2-206ENST00000553529 S100A2P29034 98 aa10.68□□□□□ -0.7
SHMT2-206ENST00000553529 PRR4Q16378 134 aa10.68□□□□□ -0.7
SHMT2-206ENST00000553529 MIR7-3HGQ8N6C7 128 aa10.67□□□□□ -0.7
SHMT2-206ENST00000553529 DAND5Q8N907 189 aa10.67□□□□□ -0.7
SHMT2-206ENST00000553529 LEPROTL1O95214 131 aa10.66□□□□□ -0.7
SHMT2-206ENST00000553529 SNRPEP62304 92 aaKnown RBP10.66□□□□□ -0.7
SHMT2-206ENST00000553529 MEIG1Q5JSS6 88 aa10.66□□□□□ -0.7
SHMT2-206ENST00000553529 TYMSOSQ8TAI1 123 aa10.66□□□□□ -0.7
SHMT2-206ENST00000553529 CRYGAP11844 174 aa10.65□□□□□ -0.7
SHMT2-206ENST00000553529 RPL24P83731 157 aaKnown RBP10.65□□□□□ -0.7
SHMT2-206ENST00000553529 NDUFA12Q9UI09 145 aa10.65□□□□□ -0.7
SHMT2-206ENST00000553529 COA6Q5JTJ3 125 aaKnown RBP10.64□□□□□ -0.71
SHMT2-206ENST00000553529 BOD1L2Q8IYS8 172 aa10.64□□□□□ -0.71
SHMT2-206ENST00000553529 RETNLBQ9BQ08 111 aa10.64□□□□□ -0.71
SHMT2-206ENST00000553529 C3orf22Q8N5N4 141 aa10.63□□□□□ -0.71
SHMT2-206ENST00000553529 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
SHMT2-206ENST00000553529 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
SHMT2-206ENST00000553529 C5orf52A6NGY3 159 aa10.6□□□□□ -0.71
SHMT2-206ENST00000553529 SFTA2Q6UW10 78 aa10.6□□□□□ -0.71
SHMT2-206ENST00000553529 LEPROTO15243 131 aa10.59□□□□□ -0.71
SHMT2-206ENST00000553529 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-206ENST00000553529 HIST3H2BBQ8N257 126 aa10.59□□□□□ -0.71
SHMT2-206ENST00000553529 TRBV10-3A0A0K0K1G6 114 aa10.58□□□□□ -0.72
SHMT2-206ENST00000553529 MYMXA0A1B0GTQ4 84 aa10.56□□□□□ -0.72
SHMT2-206ENST00000553529 J3QQQ9 107 aa10.56□□□□□ -0.72
SHMT2-206ENST00000553529 DPM2O94777 84 aa10.56□□□□□ -0.72
SHMT2-206ENST00000553529 NPC2P61916 151 aa10.56□□□□□ -0.72
SHMT2-206ENST00000553529 HERV-K104P63124 156 aa10.56□□□□□ -0.72
SHMT2-206ENST00000553529 HSPB8Q9UJY1 196 aa10.56□□□□□ -0.72
SHMT2-206ENST00000553529 IGKCP01834 107 aa10.55□□□□□ -0.72
SHMT2-206ENST00000553529 FAM229BQ4G0N7 80 aa10.55□□□□□ -0.72
SHMT2-206ENST00000553529 SOSTDC1Q6X4U4 206 aa10.55□□□□□ -0.72
SHMT2-206ENST00000553529 KRTAP4-16G5E9R7 235 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-206ENST00000553529 LINC00304Q8N9R0 145 aa10.54□□□□□ -0.72
SHMT2-206ENST00000553529 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
SHMT2-206ENST00000553529 HIST1H2BLQ99880 126 aa10.54□□□□□ -0.72
SHMT2-206ENST00000553529 PLNP26678 52 aa10.53□□□□□ -0.72
SHMT2-206ENST00000553529 SPRR1AP35321 89 aa10.53□□□□□ -0.72
SHMT2-206ENST00000553529 AKR1D1P51857 326 aa10.53□□□□□ -0.72
SHMT2-206ENST00000553529 PPDPFQ9H3Y8 114 aa10.53□□□□□ -0.72
SHMT2-206ENST00000553529 IGKV2D-26A0A0A0MRZ7 120 aa10.52□□□□□ -0.73
SHMT2-206ENST00000553529 PRYO14603 147 aa10.52□□□□□ -0.73
SHMT2-206ENST00000553529 ADAMTSL4-AS1Q5T5F5 129 aa10.52□□□□□ -0.73
SHMT2-206ENST00000553529 SMCR5Q8TEV8 140 aa10.52□□□□□ -0.73
SHMT2-206ENST00000553529 ERC2-IT1O76042 136 aa10.51□□□□□ -0.73
SHMT2-206ENST00000553529 KCNQ1DNQ9H478 68 aa10.51□□□□□ -0.73
SHMT2-206ENST00000553529 LGALS3P17931 250 aaKnown RBP10.5□□□□□ -0.73
SHMT2-206ENST00000553529 KRTDAPP60985 99 aa10.5□□□□□ -0.73
SHMT2-206ENST00000553529 MAP1LC3CQ9BXW4 147 aa10.5□□□□□ -0.73
SHMT2-206ENST00000553529 TTTY13Q9BZ97 58 aa10.5□□□□□ -0.73
SHMT2-206ENST00000553529 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
SHMT2-206ENST00000553529 HERVK_113P61574 105 aa10.48□□□□□ -0.73
SHMT2-206ENST00000553529 MUC2Q02817 5179 aa10.48□□□□□ -0.73
SHMT2-206ENST00000553529 C20orf202A1L168 122 aa10.47□□□□□ -0.73
SHMT2-206ENST00000553529 SYS1-DBNDD2H3BUS1 97 aa10.47□□□□□ -0.73
SHMT2-206ENST00000553529 LINC00337Q8N6G1 96 aa10.47□□□□□ -0.73
SHMT2-206ENST00000553529 LOC107984156A0A0G2JMH3 177 aa10.46□□□□□ -0.73
SHMT2-206ENST00000553529 ETDCA0A1B0GVM5 59 aa10.46□□□□□ -0.73
SHMT2-206ENST00000553529 B5MCH6 92 aa10.46□□□□□ -0.73
SHMT2-206ENST00000553529 DDTP30046 118 aa10.46□□□□□ -0.73
SHMT2-206ENST00000553529 ARL17AQ8IVW1 177 aa10.46□□□□□ -0.73
SHMT2-206ENST00000553529 Q9BRP9 147 aa10.46□□□□□ -0.73
SHMT2-206ENST00000553529 E9PLD3 99 aa10.45□□□□□ -0.74
SHMT2-206ENST00000553529 LOC105371267A0A1B0GV96 52 aa10.44□□□□□ -0.74
SHMT2-206ENST00000553529 LITAFQ99732 161 aa10.44□□□□□ -0.74
SHMT2-206ENST00000553529 LINC00587B1AMM8 73 aa10.43□□□□□ -0.74
SHMT2-206ENST00000553529 SCGB1D1O95968 90 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms