RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 TMEM170BQ5T4T1 132 aa9.67□□□□□ -0.86
XRCC3-204ENST00000553361 C11orf86A6NJI1 115 aa9.66□□□□□ -0.86
XRCC3-204ENST00000553361 COX17Q14061 63 aa9.66□□□□□ -0.86
XRCC3-204ENST00000553361 FAM19A1Q7Z5A9 133 aa9.66□□□□□ -0.86
XRCC3-204ENST00000553361 FAM229BQ4G0N7 80 aa9.65□□□□□ -0.86
XRCC3-204ENST00000553361 TMEM126AQ9H061 195 aa9.65□□□□□ -0.86
XRCC3-204ENST00000553361 IGKV2D-26A0A0A0MRZ7 120 aa9.64□□□□□ -0.87
XRCC3-204ENST00000553361 LINC00304Q8N9R0 145 aa9.64□□□□□ -0.87
XRCC3-204ENST00000553361 Q8NDZ9 215 aa9.64□□□□□ -0.87
XRCC3-204ENST00000553361 M0R378 163 aa9.63□□□□□ -0.87
XRCC3-204ENST00000553361 RETNLBQ9BQ08 111 aa9.63□□□□□ -0.87
XRCC3-204ENST00000553361 A0A0U1RRA0 63 aa9.62□□□□□ -0.87
XRCC3-204ENST00000553361 LINC00158P58513 81 aa9.62□□□□□ -0.87
XRCC3-204ENST00000553361 TRGC2P03986 189 aa9.61□□□□□ -0.87
XRCC3-204ENST00000553361 CHCHD1Q96BP2 118 aaKnown RBP9.61□□□□□ -0.87
XRCC3-204ENST00000553361 CHTOPQ9Y3Y2 248 aaKnown RBP9.61□□□□□ -0.87
XRCC3-204ENST00000553361 SFTA2Q6UW10 78 aa9.6□□□□□ -0.87
XRCC3-204ENST00000553361 PLEKHB2Q96CS7 222 aa9.6□□□□□ -0.87
XRCC3-204ENST00000553361 HIGD2AQ9BW72 106 aa9.59□□□□□ -0.87
XRCC3-204ENST00000553361 C3orf22Q8N5N4 141 aa9.57□□□□□ -0.88
XRCC3-204ENST00000553361 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
XRCC3-204ENST00000553361 TMEM223A0PJW6 202 aa9.56□□□□□ -0.88
XRCC3-204ENST00000553361 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
XRCC3-204ENST00000553361 SMIM13P0DJ93 91 aa9.55□□□□□ -0.88
XRCC3-204ENST00000553361 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
XRCC3-204ENST00000553361 IGLV7-46A0A075B6I9 117 aa9.54□□□□□ -0.88
XRCC3-204ENST00000553361 TRAV12-1A0A0B4J245 112 aa9.54□□□□□ -0.88
XRCC3-204ENST00000553361 HSBP1O75506 76 aa9.53□□□□□ -0.88
XRCC3-204ENST00000553361 LINC00310P59036 64 aa9.53□□□□□ -0.88
XRCC3-204ENST00000553361 MEIG1Q5JSS6 88 aa9.53□□□□□ -0.88
XRCC3-204ENST00000553361 BOD1L2Q8IYS8 172 aa9.53□□□□□ -0.88
XRCC3-204ENST00000553361 CDIP1Q9H305 208 aa9.53□□□□□ -0.88
XRCC3-204ENST00000553361 SPRR4Q96PI1 79 aa9.52□□□□□ -0.89
XRCC3-204ENST00000553361 HIST1H2BKO60814 126 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 HIST1H2BJP06899 126 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 HIST1H2BOP23527 126 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 HIST1H2BBP33778 126 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 HIST1H2BDP58876 126 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 HIST1H2BCP62807 126 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 HIST2H2BEQ16778 126 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.51□□□□□ -0.89
XRCC3-204ENST00000553361 FAM19A2Q8N3H0 131 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 HIST1H2BHQ93079 126 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 HIST1H2BNQ99877 126 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 HIST1H2BMQ99879 126 aa9.51□□□□□ -0.89
XRCC3-204ENST00000553361 NCR3O14931 201 aa9.5□□□□□ -0.89
XRCC3-204ENST00000553361 COA6Q5JTJ3 125 aaKnown RBP9.5□□□□□ -0.89
XRCC3-204ENST00000553361 MIR7-3HGQ8N6C7 128 aa9.5□□□□□ -0.89
XRCC3-204ENST00000553361 FAT4Q6V0I7 4981 aa9.49□□□□□ -0.89
XRCC3-204ENST00000553361 SERF1AO75920 110 aa9.49□□□□□ -0.89
XRCC3-204ENST00000553361 CTAG1AP78358 180 aa9.49□□□□□ -0.89
XRCC3-204ENST00000553361 TPRXLQ17RH7 258 aa9.49□□□□□ -0.89
XRCC3-204ENST00000553361 H0Y8G0 127 aa9.48□□□□□ -0.89
XRCC3-204ENST00000553361 PRYO14603 147 aa9.48□□□□□ -0.89
XRCC3-204ENST00000553361 C4orf48Q5BLP8 95 aa9.48□□□□□ -0.89
XRCC3-204ENST00000553361 SPAG11AQ6PDA7 123 aa9.48□□□□□ -0.89
XRCC3-204ENST00000553361 NDUFA12Q9UI09 145 aa9.48□□□□□ -0.89
XRCC3-204ENST00000553361 ZNF706Q9Y5V0 76 aaPredicted RBP9.48□□□□□ -0.89
XRCC3-204ENST00000553361 HERV-K104P63124 156 aa9.47□□□□□ -0.89
XRCC3-204ENST00000553361 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
XRCC3-204ENST00000553361 PPDPFQ9H3Y8 114 aa9.47□□□□□ -0.89
XRCC3-204ENST00000553361 LINC00587B1AMM8 73 aa9.46□□□□□ -0.9
XRCC3-204ENST00000553361 LEPROTL1O95214 131 aa9.46□□□□□ -0.9
XRCC3-204ENST00000553361 DAND5Q8N907 189 aa9.46□□□□□ -0.9
XRCC3-204ENST00000553361 KCNQ1DNQ9H478 68 aa9.46□□□□□ -0.9
XRCC3-204ENST00000553361 TRBV10-3A0A0K0K1G6 114 aa9.45□□□□□ -0.9
XRCC3-204ENST00000553361 MYMXA0A1B0GTQ4 84 aa9.45□□□□□ -0.9
XRCC3-204ENST00000553361 ETDCA0A1B0GVM5 59 aa9.45□□□□□ -0.9
XRCC3-204ENST00000553361 LINC00337Q8N6G1 96 aa9.45□□□□□ -0.9
XRCC3-204ENST00000553361 SPRR1AP35321 89 aa9.44□□□□□ -0.9
XRCC3-204ENST00000553361 MAP1LC3CQ9BXW4 147 aa9.44□□□□□ -0.9
XRCC3-204ENST00000553361 HSPB8Q9UJY1 196 aa9.44□□□□□ -0.9
XRCC3-204ENST00000553361 Q8NBF4 154 aa9.43□□□□□ -0.9
XRCC3-204ENST00000553361 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
XRCC3-204ENST00000553361 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
XRCC3-204ENST00000553361 FABP4P15090 132 aa9.41□□□□□ -0.9
XRCC3-204ENST00000553361 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
XRCC3-204ENST00000553361 S100A12P80511 92 aa9.41□□□□□ -0.9
XRCC3-204ENST00000553361 GAGE2AQ6NT46 116 aa9.41□□□□□ -0.9
XRCC3-204ENST00000553361 LEPROTO15243 131 aa9.4□□□□□ -0.9
XRCC3-204ENST00000553361 B5MCH6 92 aa9.38□□□□□ -0.91
XRCC3-204ENST00000553361 PLNP26678 52 aa9.38□□□□□ -0.91
XRCC3-204ENST00000553361 DDTP30046 118 aa9.38□□□□□ -0.91
XRCC3-204ENST00000553361 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
XRCC3-204ENST00000553361 FP248Q71RG6 208 aaPredicted RBP9.38□□□□□ -0.91
XRCC3-204ENST00000553361 ERC2-IT1O76042 136 aa9.37□□□□□ -0.91
XRCC3-204ENST00000553361 LINC00483Q53H64 154 aa9.37□□□□□ -0.91
XRCC3-204ENST00000553361 PMCHL2Q9BQD1 86 aa9.37□□□□□ -0.91
XRCC3-204ENST00000553361 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
XRCC3-204ENST00000553361 LOC107984156A0A0G2JMH3 177 aa9.36□□□□□ -0.91
XRCC3-204ENST00000553361 J3QQQ9 107 aa9.36□□□□□ -0.91
XRCC3-204ENST00000553361 SPINK1P00995 79 aa9.36□□□□□ -0.91
XRCC3-204ENST00000553361 ARL17AQ8IVW1 177 aa9.36□□□□□ -0.91
XRCC3-204ENST00000553361 TRBV10-2A0A0K0K1G8 114 aa9.35□□□□□ -0.91
XRCC3-204ENST00000553361 DPM2O94777 84 aa9.35□□□□□ -0.91
XRCC3-204ENST00000553361 HERVK_113P61574 105 aa9.35□□□□□ -0.91
XRCC3-204ENST00000553361 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
XRCC3-204ENST00000553361 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
XRCC3-204ENST00000553361 MOBPQ13875 183 aa9.34□□□□□ -0.91
XRCC3-204ENST00000553361 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms