RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 WFDC2Q14508 124 aa12.79□□□□□ -0.36
RBFOX1-215ENST00000553186 Q8NDZ9 215 aa12.79□□□□□ -0.36
RBFOX1-215ENST00000553186 TRAV13-2A0A0B4J235 113 aa12.79□□□□□ -0.36
RBFOX1-215ENST00000553186 TRIAP1O43715 76 aa12.78□□□□□ -0.36
RBFOX1-215ENST00000553186 NDUFC2O95298 119 aa12.78□□□□□ -0.36
RBFOX1-215ENST00000553186 NDUFC2-KCTD14E9PQ53 114 aa12.77□□□□□ -0.36
RBFOX1-215ENST00000553186 PSMB2P49721 201 aa12.77□□□□□ -0.36
RBFOX1-215ENST00000553186 CARD19Q96LW7 228 aa12.77□□□□□ -0.37
RBFOX1-215ENST00000553186 H3BMG7 143 aa12.76□□□□□ -0.37
RBFOX1-215ENST00000553186 PSCAO43653 123 aa12.76□□□□□ -0.37
RBFOX1-215ENST00000553186 PRR3P79522 188 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-215ENST00000553186 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
RBFOX1-215ENST00000553186 LYRM7Q5U5X0 104 aa12.75□□□□□ -0.37
RBFOX1-215ENST00000553186 Q6ZRN7 208 aaPredicted RBP12.75□□□□□ -0.37
RBFOX1-215ENST00000553186 F8W1H4 67 aa12.74□□□□□ -0.37
RBFOX1-215ENST00000553186 SCGB1C2P0DMR2 95 aa12.74□□□□□ -0.37
RBFOX1-215ENST00000553186 Q6ZRP5 223 aa12.74□□□□□ -0.37
RBFOX1-215ENST00000553186 M0R2N4 97 aa12.73□□□□□ -0.37
RBFOX1-215ENST00000553186 TCL1BO95988 128 aa12.73□□□□□ -0.37
RBFOX1-215ENST00000553186 PRO0461Q9UI25 63 aa12.73□□□□□ -0.37
RBFOX1-215ENST00000553186 TLX1NBP0CAT3 122 aa12.71□□□□□ -0.37
RBFOX1-215ENST00000553186 TRBV20-1A0A075B6N2 111 aa12.71□□□□□ -0.37
RBFOX1-215ENST00000553186 MTURNQ8N3F0 131 aa12.71□□□□□ -0.37
RBFOX1-215ENST00000553186 GAGE2EQ4V326 116 aa12.7□□□□□ -0.38
RBFOX1-215ENST00000553186 Q6ZR54 194 aa12.7□□□□□ -0.38
RBFOX1-215ENST00000553186 GAGE2DQ9UEU5 116 aa12.7□□□□□ -0.38
RBFOX1-215ENST00000553186 KMT2AQ03164 3969 aa12.69□□□□□ -0.38
RBFOX1-215ENST00000553186 LRCOL1A6NCL2 159 aa12.69□□□□□ -0.38
RBFOX1-215ENST00000553186 RPL28P46779 137 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-215ENST00000553186 OR13C6PQ8NH95 151 aa12.69□□□□□ -0.38
RBFOX1-215ENST00000553186 COX6CP09669 75 aa12.69□□□□□ -0.38
RBFOX1-215ENST00000553186 SMIM11BQ8TCY0 68 aa12.69□□□□□ -0.38
RBFOX1-215ENST00000553186 NCR3O14931 201 aa12.68□□□□□ -0.38
RBFOX1-215ENST00000553186 ETDBQ3ZM63 59 aa12.68□□□□□ -0.38
RBFOX1-215ENST00000553186 CNBPP62633 177 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-215ENST00000553186 C9orf129Q5T035 196 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-215ENST00000553186 VPREB1P12018 145 aa12.66□□□□□ -0.38
RBFOX1-215ENST00000553186 RPL18AQ02543 176 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-215ENST00000553186 C14orf177Q52M58 125 aa12.66□□□□□ -0.38
RBFOX1-215ENST00000553186 TRBV10-2A0A0K0K1G8 114 aa12.65□□□□□ -0.38
RBFOX1-215ENST00000553186 TMEM126AQ9H061 195 aa12.65□□□□□ -0.38
RBFOX1-215ENST00000553186 LY6G6CO95867 125 aa12.64□□□□□ -0.39
RBFOX1-215ENST00000553186 LINC00476Q8WZB0 136 aa12.64□□□□□ -0.39
RBFOX1-215ENST00000553186 CLEC2BQ92478 149 aa12.64□□□□□ -0.39
RBFOX1-215ENST00000553186 C3orf84H3BNL1 204 aa12.64□□□□□ -0.39
RBFOX1-215ENST00000553186 ATXN8Q156A1 80 aa12.63□□□□□ -0.39
RBFOX1-215ENST00000553186 SMCPP49901 116 aaPredicted RBP12.62□□□□□ -0.39
RBFOX1-215ENST00000553186 IGLV6-57P01721 117 aa12.62□□□□□ -0.39
RBFOX1-215ENST00000553186 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.61□□□□□ -0.39
RBFOX1-215ENST00000553186 LST1O00453 97 aa12.61□□□□□ -0.39
RBFOX1-215ENST00000553186 S100A7L2Q5SY68 101 aa12.61□□□□□ -0.39
RBFOX1-215ENST00000553186 LOC107984640A0A0U1RRK4 108 aa12.6□□□□□ -0.39
RBFOX1-215ENST00000553186 DNAH2Q9P225 4427 aa12.6□□□□□ -0.39
RBFOX1-215ENST00000553186 J3QR89 54 aa12.59□□□□□ -0.39
RBFOX1-215ENST00000553186 GAGE2BQ13066 116 aa12.59□□□□□ -0.39
RBFOX1-215ENST00000553186 SERTAD4-AS1Q5TG53 156 aa12.58□□□□□ -0.4
RBFOX1-215ENST00000553186 FAM218AQ96MZ4 157 aa12.58□□□□□ -0.4
RBFOX1-215ENST00000553186 TRBV10-3A0A0K0K1G6 114 aa12.57□□□□□ -0.4
RBFOX1-215ENST00000553186 LINC01620Q4KN68 170 aa12.57□□□□□ -0.4
RBFOX1-215ENST00000553186 PLA2G2DQ9UNK4 145 aa12.57□□□□□ -0.4
RBFOX1-215ENST00000553186 SIGMAR1Q99720 223 aa12.57□□□□□ -0.4
RBFOX1-215ENST00000553186 M0R378 163 aa12.56□□□□□ -0.4
RBFOX1-215ENST00000553186 Q8N814 137 aa12.56□□□□□ -0.4
RBFOX1-215ENST00000553186 A0A087WTM6 91 aa12.56□□□□□ -0.4
RBFOX1-215ENST00000553186 C9JAW5 83 aa12.55□□□□□ -0.4
RBFOX1-215ENST00000553186 KRTAP7-1Q8IUC3 87 aa12.55□□□□□ -0.4
RBFOX1-215ENST00000553186 FAM168BA1KXE4 195 aa12.54□□□□□ -0.4
RBFOX1-215ENST00000553186 H0YGX0 51 aa12.54□□□□□ -0.4
RBFOX1-215ENST00000553186 C1orf134Q5TEV5 83 aa12.54□□□□□ -0.4
RBFOX1-215ENST00000553186 C9orf163Q8N9P6 203 aa12.54□□□□□ -0.4
RBFOX1-215ENST00000553186 ALMS1Q8TCU4 4167 aa12.53□□□□□ -0.4
RBFOX1-215ENST00000553186 DNAH6Q9C0G6 4158 aa12.53□□□□□ -0.4
RBFOX1-215ENST00000553186 A0A096LNI7 61 aa12.53□□□□□ -0.4
RBFOX1-215ENST00000553186 C16orf90A8MZG2 172 aa12.53□□□□□ -0.4
RBFOX1-215ENST00000553186 C6orf99Q4VX62 202 aa12.53□□□□□ -0.4
RBFOX1-215ENST00000553186 IGLV5-37A0A075B6J1 123 aa12.52□□□□□ -0.41
RBFOX1-215ENST00000553186 SLC25A20O43772 301 aa12.52□□□□□ -0.41
RBFOX1-215ENST00000553186 TRACP01848 142 aa12.51□□□□□ -0.41
RBFOX1-215ENST00000553186 TRAV23DV6A0A075B6W5 121 aa12.5□□□□□ -0.41
RBFOX1-215ENST00000553186 A0A087WYN8 130 aa12.5□□□□□ -0.41
RBFOX1-215ENST00000553186 SCGB1A1P11684 91 aa12.5□□□□□ -0.41
RBFOX1-215ENST00000553186 NKAPP1Q8N9T2 125 aa12.5□□□□□ -0.41
RBFOX1-215ENST00000553186 TEN1Q86WV5 123 aa12.49□□□□□ -0.41
RBFOX1-215ENST00000553186 C7orf33Q8WU49 177 aa12.49□□□□□ -0.41
RBFOX1-215ENST00000553186 M0QXV9 152 aa12.48□□□□□ -0.41
RBFOX1-215ENST00000553186 LINC01600Q96MT4 127 aa12.48□□□□□ -0.41
RBFOX1-215ENST00000553186 IGKV2-24A0A0C4DH68 120 aa12.47□□□□□ -0.41
RBFOX1-215ENST00000553186 SDIM1Q6ZPB5 146 aa12.47□□□□□ -0.41
RBFOX1-215ENST00000553186 ANKRD29Q8N6D5 301 aa12.47□□□□□ -0.41
RBFOX1-215ENST00000553186 CDIP1Q9H305 208 aa12.47□□□□□ -0.41
RBFOX1-215ENST00000553186 ZNF73O43830 326 aaPredicted RBP12.46□□□□□ -0.41
RBFOX1-215ENST00000553186 FAM19A5Q7Z5A7 132 aaPredicted RBP12.46□□□□□ -0.41
RBFOX1-215ENST00000553186 C22orf24Q9Y442 160 aa12.46□□□□□ -0.41
RBFOX1-215ENST00000553186 DNAH17Q9UFH2 4485 aa12.45□□□□□ -0.42
RBFOX1-215ENST00000553186 PPDPFLQ8WWR9 84 aa12.45□□□□□ -0.42
RBFOX1-215ENST00000553186 DIRC1Q969H9 104 aa12.45□□□□□ -0.42
RBFOX1-215ENST00000553186 KCNQ1DNQ9H478 68 aa12.45□□□□□ -0.42
RBFOX1-215ENST00000553186 CHTF8P0CG12 524 aa12.44□□□□□ -0.42
RBFOX1-215ENST00000553186 A0A1W2PNN7 141 aa12.43□□□□□ -0.42
RBFOX1-215ENST00000553186 H3BT86 120 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms