RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 C22orf24Q9Y442 160 aa6.42□□□□□ -1.38
TRAFD1-208ENST00000552890 TIMM17BO60830 172 aa6.41□□□□□ -1.38
TRAFD1-208ENST00000552890 HIST1H2BLQ99880 126 aa6.41□□□□□ -1.38
TRAFD1-208ENST00000552890 PMCHL2Q9BQD1 86 aa6.41□□□□□ -1.38
TRAFD1-208ENST00000552890 HSPG2P98160 4391 aa6.4□□□□□ -1.38
TRAFD1-208ENST00000552890 APOBP04114 4563 aaKnown RBP6.4□□□□□ -1.39
TRAFD1-208ENST00000552890 LOC107984156A0A0G2JMH3 177 aa6.39□□□□□ -1.39
TRAFD1-208ENST00000552890 J3QL48 77 aa6.39□□□□□ -1.39
TRAFD1-208ENST00000552890 SMIM13P0DJ93 91 aa6.39□□□□□ -1.39
TRAFD1-208ENST00000552890 C1orf137Q5JT78 98 aa6.39□□□□□ -1.39
TRAFD1-208ENST00000552890 Q6ZVH6 145 aa6.39□□□□□ -1.39
TRAFD1-208ENST00000552890 PHF5AQ7RTV0 110 aaKnown RBP6.39□□□□□ -1.39
TRAFD1-208ENST00000552890 ARL17AQ8IVW1 177 aa6.39□□□□□ -1.39
TRAFD1-208ENST00000552890 DIRC1Q969H9 104 aa6.39□□□□□ -1.39
TRAFD1-208ENST00000552890 PSORS1C2Q9UIG4 136 aa6.39□□□□□ -1.39
TRAFD1-208ENST00000552890 A0A0J9YXY3 114 aa6.38□□□□□ -1.39
TRAFD1-208ENST00000552890 FAM168BA1KXE4 195 aa6.38□□□□□ -1.39
TRAFD1-208ENST00000552890 C5orf52A6NGY3 159 aa6.38□□□□□ -1.39
TRAFD1-208ENST00000552890 TMEM238C9JI98 176 aa6.38□□□□□ -1.39
TRAFD1-208ENST00000552890 M0R378 163 aa6.38□□□□□ -1.39
TRAFD1-208ENST00000552890 RPL28P46779 137 aaKnown RBP6.38□□□□□ -1.39
TRAFD1-208ENST00000552890 MIR7-3HGQ8N6C7 128 aa6.38□□□□□ -1.39
TRAFD1-208ENST00000552890 RYR1P21817 5038 aa6.37□□□□□ -1.39
TRAFD1-208ENST00000552890 DNAH8Q96JB1 4490 aa6.37□□□□□ -1.39
TRAFD1-208ENST00000552890 TRBV10-2A0A0K0K1G8 114 aa6.37□□□□□ -1.39
TRAFD1-208ENST00000552890 ZNF815PA8K554 130 aa6.37□□□□□ -1.39
TRAFD1-208ENST00000552890 NDUFC2O95298 119 aa6.37□□□□□ -1.39
TRAFD1-208ENST00000552890 SCGB1D4Q6XE38 83 aa6.37□□□□□ -1.39
TRAFD1-208ENST00000552890 BOD1L2Q8IYS8 172 aa6.37□□□□□ -1.39
TRAFD1-208ENST00000552890 KRTAP29-1A8MX34 341 aaPredicted RBP6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 SCGB1D1O95968 90 aa6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 HNRNPA3P51991 378 aaKnown RBP6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 C4orf48Q5BLP8 95 aa6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 LINC00518Q8N0U6 118 aa6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 LINC00167Q96N53 147 aa6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 PPDPFQ9H3Y8 114 aa6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 HERC2O95714 4834 aa6.36□□□□□ -1.39
TRAFD1-208ENST00000552890 A0A0U1RRA0 63 aa6.35□□□□□ -1.39
TRAFD1-208ENST00000552890 BCE1O60756 84 aa6.35□□□□□ -1.39
TRAFD1-208ENST00000552890 VPREB1P12018 145 aa6.35□□□□□ -1.39
TRAFD1-208ENST00000552890 IFITM1P13164 125 aa6.35□□□□□ -1.39
TRAFD1-208ENST00000552890 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
TRAFD1-208ENST00000552890 SPANXB1Q9NS25 103 aaPredicted RBP6.35□□□□□ -1.39
TRAFD1-208ENST00000552890 DMBT1Q9UGM3 2413 aaPredicted RBP6.35□□□□□ -1.39
TRAFD1-208ENST00000552890 FLG2Q5D862 2391 aaPredicted RBP6.34□□□□□ -1.39
TRAFD1-208ENST00000552890 ZNF861PO60384 105 aa6.34□□□□□ -1.39
TRAFD1-208ENST00000552890 TSPEAR-AS2P59090 65 aa6.34□□□□□ -1.39
TRAFD1-208ENST00000552890 IGLV1-50A0A075B6I6 118 aa6.33□□□□□ -1.4
TRAFD1-208ENST00000552890 HINT1P49773 126 aaPredicted RBP6.33□□□□□ -1.4
TRAFD1-208ENST00000552890 SRSF9Q13242 221 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRAFD1-208ENST00000552890 SPANXCQ9NY87 97 aa6.33□□□□□ -1.4
TRAFD1-208ENST00000552890 PRYO14603 147 aa6.32□□□□□ -1.4
TRAFD1-208ENST00000552890 UBE2AP49459 152 aa6.32□□□□□ -1.4
TRAFD1-208ENST00000552890 S100A7L2Q5SY68 101 aa6.32□□□□□ -1.4
TRAFD1-208ENST00000552890 KRTAP7-1Q8IUC3 87 aa6.32□□□□□ -1.4
TRAFD1-208ENST00000552890 GAGE10A6NGK3 116 aa6.31□□□□□ -1.4
TRAFD1-208ENST00000552890 RPL37AP8A6NKH3 93 aa6.31□□□□□ -1.4
TRAFD1-208ENST00000552890 H0Y9J4 135 aa6.31□□□□□ -1.4
TRAFD1-208ENST00000552890 JOSD1Q15040 202 aaPredicted RBP6.31□□□□□ -1.4
TRAFD1-208ENST00000552890 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
TRAFD1-208ENST00000552890 VPS13BQ7Z7G8 4022 aa6.31□□□□□ -1.4
TRAFD1-208ENST00000552890 IGKV2-28A0A075B6P5 120 aa6.3□□□□□ -1.4
TRAFD1-208ENST00000552890 IGKV2D-28P01615 120 aa6.3□□□□□ -1.4
TRAFD1-208ENST00000552890 RPL13AP40429 203 aaKnown RBP6.3□□□□□ -1.4
TRAFD1-208ENST00000552890 ATOH7Q8N100 152 aa6.3□□□□□ -1.4
TRAFD1-208ENST00000552890 TMEM126AQ9H061 195 aa6.3□□□□□ -1.4
TRAFD1-208ENST00000552890 KCNQ1DNQ9H478 68 aa6.3□□□□□ -1.4
TRAFD1-208ENST00000552890 DDTP30046 118 aa6.29□□□□□ -1.4
TRAFD1-208ENST00000552890 FAT1Q14517 4588 aa6.29□□□□□ -1.4
TRAFD1-208ENST00000552890 LINC00337Q8N6G1 96 aa6.29□□□□□ -1.4
TRAFD1-208ENST00000552890 LINC00308Q8TCZ7 52 aa6.29□□□□□ -1.4
TRAFD1-208ENST00000552890 LINC01600Q96MT4 127 aa6.29□□□□□ -1.4
TRAFD1-208ENST00000552890 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
TRAFD1-208ENST00000552890 ZNF706Q9Y5V0 76 aaPredicted RBP6.29□□□□□ -1.4
TRAFD1-208ENST00000552890 ETDCA0A1B0GVM5 59 aa6.28□□□□□ -1.4
TRAFD1-208ENST00000552890 DLEU1O43261 78 aa6.28□□□□□ -1.4
TRAFD1-208ENST00000552890 ANKRD39Q53RE8 183 aa6.28□□□□□ -1.4
TRAFD1-208ENST00000552890 DAND5Q8N907 189 aa6.28□□□□□ -1.4
TRAFD1-208ENST00000552890 VAMP8Q9BV40 100 aa6.28□□□□□ -1.4
TRAFD1-208ENST00000552890 ADAMTSL4-AS1Q5T5F5 129 aa6.27□□□□□ -1.41
TRAFD1-208ENST00000552890 FAM19A1Q7Z5A9 133 aa6.27□□□□□ -1.41
TRAFD1-208ENST00000552890 TRAV13-2A0A0B4J235 113 aa6.26□□□□□ -1.41
TRAFD1-208ENST00000552890 NCR3O14931 201 aa6.26□□□□□ -1.41
TRAFD1-208ENST00000552890 IGLV6-57P01721 117 aa6.26□□□□□ -1.41
TRAFD1-208ENST00000552890 LITAFQ99732 161 aa6.26□□□□□ -1.41
TRAFD1-208ENST00000552890 TRBV10-3A0A0K0K1G6 114 aa6.25□□□□□ -1.41
TRAFD1-208ENST00000552890 COX8AP10176 69 aa6.25□□□□□ -1.41
TRAFD1-208ENST00000552890 PCP2Q8IVA1 136 aa6.25□□□□□ -1.41
TRAFD1-208ENST00000552890 OR13C6PQ8NH95 151 aa6.25□□□□□ -1.41
TRAFD1-208ENST00000552890 TRAV23DV6A0A075B6W5 121 aa6.24□□□□□ -1.41
TRAFD1-208ENST00000552890 SPRR1AP35321 89 aa6.24□□□□□ -1.41
TRAFD1-208ENST00000552890 FAM229BQ4G0N7 80 aa6.24□□□□□ -1.41
TRAFD1-208ENST00000552890 TRBV7-6A0A0J9YX20 115 aa6.23□□□□□ -1.41
TRAFD1-208ENST00000552890 A4D1N5 150 aa6.23□□□□□ -1.41
TRAFD1-208ENST00000552890 CRYGAP11844 174 aa6.23□□□□□ -1.41
TRAFD1-208ENST00000552890 SLC25A34Q6PIV7 304 aa6.23□□□□□ -1.41
TRAFD1-208ENST00000552890 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms