RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 CIRBPQ14011 172 aaKnown RBP7.09□□□□□ -1.28
MMP19-209ENST00000552872 RNASE13Q5GAN3 156 aaKnown RBP7.09□□□□□ -1.28
MMP19-209ENST00000552872 LINC00308Q8TCZ7 52 aa7.08□□□□□ -1.28
MMP19-209ENST00000552872 A0A087WVE0 104 aa7.08□□□□□ -1.28
MMP19-209ENST00000552872 LYRM9A8MSI8 78 aa7.08□□□□□ -1.28
MMP19-209ENST00000552872 USP17L23D6RBM5 183 aa7.07□□□□□ -1.28
MMP19-209ENST00000552872 DNAL4O96015 105 aa7.07□□□□□ -1.28
MMP19-209ENST00000552872 Q6JHZ5 121 aa7.07□□□□□ -1.28
MMP19-209ENST00000552872 DYNC2H1Q8NCM8 4307 aaKnown RBP7.07□□□□□ -1.28
MMP19-209ENST00000552872 Q6ZRU5 148 aa7.06□□□□□ -1.28
MMP19-209ENST00000552872 LINC00612Q8N6U2 182 aa7.06□□□□□ -1.28
MMP19-209ENST00000552872 FAM218AQ96MZ4 157 aa7.06□□□□□ -1.28
MMP19-209ENST00000552872 TMEM243Q9BU79 118 aa7.06□□□□□ -1.28
MMP19-209ENST00000552872 C11orf68Q9H3H3 251 aaKnown RBP7.06□□□□□ -1.28
MMP19-209ENST00000552872 DNAH1Q9P2D7 4330 aa7.06□□□□□ -1.28
MMP19-209ENST00000552872 UBE2D4Q9Y2X8 147 aa7.05□□□□□ -1.28
MMP19-209ENST00000552872 Q9HAA7 133 aa7.05□□□□□ -1.28
MMP19-209ENST00000552872 IGLV5-45A0A087WSX0 123 aa7.04□□□□□ -1.28
MMP19-209ENST00000552872 DEFB131BA0A096LNP1 70 aa7.04□□□□□ -1.28
MMP19-209ENST00000552872 CDKN2A-AS1Q9UH64 79 aa7.04□□□□□ -1.28
MMP19-209ENST00000552872 K7EQD1 137 aa7.04□□□□□ -1.28
MMP19-209ENST00000552872 GYPEP15421 78 aa7.04□□□□□ -1.28
MMP19-209ENST00000552872 PRR15Q8IV56 129 aa7.04□□□□□ -1.28
MMP19-209ENST00000552872 Q9H8V8 135 aa7.04□□□□□ -1.28
MMP19-209ENST00000552872 LAMTOR3Q9UHA4 124 aa7.04□□□□□ -1.28
MMP19-209ENST00000552872 CHCHD7Q9BUK0 85 aa7.03□□□□□ -1.28
MMP19-209ENST00000552872 C14orf132Q9NPU4 83 aa7.03□□□□□ -1.28
MMP19-209ENST00000552872 LINC00846Q9NV44 126 aa7.03□□□□□ -1.28
MMP19-209ENST00000552872 PAX4O43316 350 aa7.03□□□□□ -1.28
MMP19-209ENST00000552872 KMT2AQ03164 3969 aa7.03□□□□□ -1.28
MMP19-209ENST00000552872 SOSTDC1Q6X4U4 206 aa7.03□□□□□ -1.28
MMP19-209ENST00000552872 DNAH10Q8IVF4 4471 aa7.03□□□□□ -1.28
MMP19-209ENST00000552872 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.02□□□□□ -1.29
MMP19-209ENST00000552872 IGLV5-39A0A0G2JS06 123 aa7.02□□□□□ -1.29
MMP19-209ENST00000552872 IGKV2-29A2NJV5 120 aaPredicted RBP7.02□□□□□ -1.29
MMP19-209ENST00000552872 C9orf129Q5T035 196 aaKnown RBP7.02□□□□□ -1.29
MMP19-209ENST00000552872 ZNF625Q96I27 306 aaPredicted RBP7.02□□□□□ -1.29
MMP19-209ENST00000552872 PRO0255Q9UI72 69 aa7.01□□□□□ -1.29
MMP19-209ENST00000552872 PIK3CD-AS1Q5SR53 167 aa7.01□□□□□ -1.29
MMP19-209ENST00000552872 HYDINQ4G0P3 5121 aa7□□□□□ -1.29
MMP19-209ENST00000552872 H7BZZ5 65 aa7□□□□□ -1.29
MMP19-209ENST00000552872 Q8N3U1 123 aa7□□□□□ -1.29
MMP19-209ENST00000552872 TRBV7-6A0A0J9YX20 115 aa6.99□□□□□ -1.29
MMP19-209ENST00000552872 GHRHP01286 108 aa6.99□□□□□ -1.29
MMP19-209ENST00000552872 RPL28P46779 137 aaKnown RBP6.99□□□□□ -1.29
MMP19-209ENST00000552872 TRBV6-4A0A1B0GX49 114 aa6.98□□□□□ -1.29
MMP19-209ENST00000552872 XCL1P47992 114 aa6.98□□□□□ -1.29
MMP19-209ENST00000552872 OBSCN-AS1Q96MR7 158 aa6.98□□□□□ -1.29
MMP19-209ENST00000552872 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
MMP19-209ENST00000552872 SMIM1B2RUZ4 78 aa6.98□□□□□ -1.29
MMP19-209ENST00000552872 CRPP02741 224 aa6.98□□□□□ -1.29
MMP19-209ENST00000552872 RPL36AP83881 106 aaKnown RBP6.98□□□□□ -1.29
MMP19-209ENST00000552872 LYPD5Q6UWN5 251 aa6.98□□□□□ -1.29
MMP19-209ENST00000552872 RPL36ALQ969Q0 106 aaKnown RBP6.98□□□□□ -1.29
MMP19-209ENST00000552872 TRAV10A0A0B4J240 114 aa6.97□□□□□ -1.29
MMP19-209ENST00000552872 COX6A2Q02221 97 aa6.97□□□□□ -1.29
MMP19-209ENST00000552872 NTM-AS1Q6ZSK4 140 aa6.97□□□□□ -1.29
MMP19-209ENST00000552872 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
MMP19-209ENST00000552872 A0A087WYN8 130 aa6.97□□□□□ -1.29
MMP19-209ENST00000552872 CCKP06307 115 aa6.97□□□□□ -1.29
MMP19-209ENST00000552872 ATP5EP56381 51 aaPredicted RBP6.97□□□□□ -1.29
MMP19-209ENST00000552872 LINC00242Q5T6M2 205 aa6.97□□□□□ -1.29
MMP19-209ENST00000552872 DGAT2L7PQ6IED9 249 aa6.97□□□□□ -1.29
MMP19-209ENST00000552872 TRAV23DV6A0A075B6W5 121 aa6.96□□□□□ -1.29
MMP19-209ENST00000552872 SS18Q15532 418 aa6.96□□□□□ -1.3
MMP19-209ENST00000552872 MRPL55Q7Z7F7 128 aaKnown RBP6.96□□□□□ -1.3
MMP19-209ENST00000552872 NCR3O14931 201 aa6.95□□□□□ -1.3
MMP19-209ENST00000552872 BCE1O60756 84 aa6.95□□□□□ -1.3
MMP19-209ENST00000552872 FAM19A3Q7Z5A8 133 aa6.95□□□□□ -1.3
MMP19-209ENST00000552872 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
MMP19-209ENST00000552872 KMT2CQ8NEZ4 4911 aaKnown RBP6.95□□□□□ -1.3
MMP19-209ENST00000552872 VPS13DQ5THJ4 4388 aa6.95□□□□□ -1.3
MMP19-209ENST00000552872 KLKP1Q107X0 134 aa6.95□□□□□ -1.3
MMP19-209ENST00000552872 TRBV10-1A0A0K0K1A3 114 aa6.94□□□□□ -1.3
MMP19-209ENST00000552872 ESRGQ1W209 222 aa6.94□□□□□ -1.3
MMP19-209ENST00000552872 LINC00337Q8N6G1 96 aa6.94□□□□□ -1.3
MMP19-209ENST00000552872 H0YGX0 51 aa6.93□□□□□ -1.3
MMP19-209ENST00000552872 S100A7L2Q5SY68 101 aa6.93□□□□□ -1.3
MMP19-209ENST00000552872 ATP5EP2Q5VTU8 51 aa6.93□□□□□ -1.3
MMP19-209ENST00000552872 DNAH2Q9P225 4427 aa6.92□□□□□ -1.3
MMP19-209ENST00000552872 IGKV2-28A0A075B6P5 120 aa6.92□□□□□ -1.3
MMP19-209ENST00000552872 IGKV2D-28P01615 120 aa6.92□□□□□ -1.3
MMP19-209ENST00000552872 CLPSL2Q6UWE3 100 aa6.92□□□□□ -1.3
MMP19-209ENST00000552872 WFDC10BQ8IUB3 73 aa6.92□□□□□ -1.3
MMP19-209ENST00000552872 SMIM11BQ8TCY0 68 aa6.92□□□□□ -1.3
MMP19-209ENST00000552872 LECT2O14960 151 aa6.91□□□□□ -1.3
MMP19-209ENST00000552872 SND1-IT1Q9HBX3 110 aa6.91□□□□□ -1.3
MMP19-209ENST00000552872 TRBV6-8A0A0A6YYG3 113 aa6.91□□□□□ -1.3
MMP19-209ENST00000552872 IGKV3OR2-268A0A0C4DH90 116 aa6.91□□□□□ -1.3
MMP19-209ENST00000552872 ENHOQ6UWT2 76 aa6.91□□□□□ -1.3
MMP19-209ENST00000552872 MUC7Q8TAX7 377 aa6.91□□□□□ -1.3
MMP19-209ENST00000552872 NDUFC1O43677 76 aa6.9□□□□□ -1.3
MMP19-209ENST00000552872 MIR7-3HGQ8N6C7 128 aa6.9□□□□□ -1.3
MMP19-209ENST00000552872 LINC00588Q9Y4M8 146 aa6.9□□□□□ -1.3
MMP19-209ENST00000552872 IBA57-AS1B1ANH7 110 aa6.9□□□□□ -1.31
MMP19-209ENST00000552872 SLPIP03973 132 aa6.9□□□□□ -1.31
MMP19-209ENST00000552872 SACSQ9NZJ4 4579 aa6.89□□□□□ -1.31
MMP19-209ENST00000552872 RBM3P98179 157 aaKnown RBP6.89□□□□□ -1.31
MMP19-209ENST00000552872 WWC2-AS2Q96NR7 200 aa6.89□□□□□ -1.31
MMP19-209ENST00000552872 APLNQ9ULZ1 77 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms