RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 A0A1B0GUV1 79 aa5.56□□□□□ -1.52
TMEM116-217ENST00000552801 TMEM223A0PJW6 202 aa5.56□□□□□ -1.52
TMEM116-217ENST00000552801 SCGB1A1P11684 91 aa5.56□□□□□ -1.52
TMEM116-217ENST00000552801 RPL39P62891 51 aaKnown RBP5.56□□□□□ -1.52
TMEM116-217ENST00000552801 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
TMEM116-217ENST00000552801 A0A087WYN8 130 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 IGKV2-24A0A0C4DH68 120 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 GAGE12HA6NDE8 117 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 I3L3M4 83 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 J3QR89 54 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 M0QXV9 152 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 LEPROTO15243 131 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 TSPAN13O95857 204 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 CHTF8P0CG12 524 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 SCGB1D4Q6XE38 83 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 IGLV4-60A0A075B6I1 120 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 IGLV4-3A0A075B6K6 122 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 J3QQQ9 107 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 ZNF22P17026 224 aaPredicted RBP5.55□□□□□ -1.52
TMEM116-217ENST00000552801 LINC01600Q96MT4 127 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
TMEM116-217ENST00000552801 A0A0B4J2C4 111 aa5.54□□□□□ -1.52
TMEM116-217ENST00000552801 H3BMG7 143 aa5.54□□□□□ -1.52
TMEM116-217ENST00000552801 PANO1I0J062 215 aa5.54□□□□□ -1.52
TMEM116-217ENST00000552801 MRPS36P82909 103 aaKnown RBP5.54□□□□□ -1.52
TMEM116-217ENST00000552801 COX6A2Q02221 97 aa5.54□□□□□ -1.52
TMEM116-217ENST00000552801 HIGD2BQ4VC39 106 aa5.54□□□□□ -1.52
TMEM116-217ENST00000552801 SPACA4Q8TDM5 124 aa5.54□□□□□ -1.52
TMEM116-217ENST00000552801 FAM104AQ969W3 186 aa5.54□□□□□ -1.52
TMEM116-217ENST00000552801 TMEM101Q96IK0 257 aa5.54□□□□□ -1.52
TMEM116-217ENST00000552801 TRBV20-1A0A075B6N2 111 aa5.53□□□□□ -1.52
TMEM116-217ENST00000552801 LGALS3P17931 250 aaKnown RBP5.53□□□□□ -1.52
TMEM116-217ENST00000552801 CIRBPQ14011 172 aaKnown RBP5.53□□□□□ -1.52
TMEM116-217ENST00000552801 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
TMEM116-217ENST00000552801 KRTAP26-1Q6PEX3 210 aa5.53□□□□□ -1.52
TMEM116-217ENST00000552801 SPANXA1Q9NS26 97 aa5.53□□□□□ -1.52
TMEM116-217ENST00000552801 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
TMEM116-217ENST00000552801 TMEM238C9JI98 176 aa5.52□□□□□ -1.53
TMEM116-217ENST00000552801 RPL24P83731 157 aaKnown RBP5.52□□□□□ -1.53
TMEM116-217ENST00000552801 SRSF9Q13242 221 aaKnown RBP eCLIP5.52□□□□□ -1.53
TMEM116-217ENST00000552801 TMEM170BQ5T4T1 132 aa5.52□□□□□ -1.53
TMEM116-217ENST00000552801 REG3GQ6UW15 175 aa5.52□□□□□ -1.53
TMEM116-217ENST00000552801 CHCHD10Q8WYQ3 142 aaPredicted RBP5.52□□□□□ -1.53
TMEM116-217ENST00000552801 PLAC8Q9NZF1 115 aa5.52□□□□□ -1.53
TMEM116-217ENST00000552801 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
TMEM116-217ENST00000552801 IGLV5-45A0A087WSX0 123 aa5.51□□□□□ -1.53
TMEM116-217ENST00000552801 H7C423 109 aa5.51□□□□□ -1.53
TMEM116-217ENST00000552801 CFC1BP0CG36 223 aa5.51□□□□□ -1.53
TMEM116-217ENST00000552801 CFC1P0CG37 223 aa5.51□□□□□ -1.53
TMEM116-217ENST00000552801 LITAFQ99732 161 aa5.51□□□□□ -1.53
TMEM116-217ENST00000552801 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.5□□□□□ -1.53
TMEM116-217ENST00000552801 TINCRA0A1B0GVN0 87 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 IGKV2-29A2NJV5 120 aaPredicted RBP5.5□□□□□ -1.53
TMEM116-217ENST00000552801 TIMM17BO60830 172 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 XCL1P47992 114 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 SS18Q15532 418 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 ETDBQ3ZM63 59 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 C15orf56Q8N910 161 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 TIMM21Q9BVV7 248 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 SPANXDQ9BXN6 97 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 VCX2Q9H322 139 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 SPANXCQ9NY87 97 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 PRO1854Q9UHT4 67 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 UBE2D4Q9Y2X8 147 aa5.5□□□□□ -1.53
TMEM116-217ENST00000552801 LRP1Q07954 4544 aaKnown RBP5.49□□□□□ -1.53
TMEM116-217ENST00000552801 GVQW2A0A096LPI5 108 aaPredicted RBP5.49□□□□□ -1.53
TMEM116-217ENST00000552801 IGHV1-58A0A0C4DH39 117 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 A0A0J9YXY3 114 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 APOMO95445 188 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 SLPIP03973 132 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 MALP21145 153 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 PRR3P79522 188 aaKnown RBP5.49□□□□□ -1.53
TMEM116-217ENST00000552801 FOXI1Q12951 378 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 FAM19A3Q7Z5A8 133 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 TEN1Q86WV5 123 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 CARD19Q96LW7 228 aa5.49□□□□□ -1.53
TMEM116-217ENST00000552801 OPRPNQ99935 248 aaPredicted RBP5.49□□□□□ -1.53
TMEM116-217ENST00000552801 A4D1N5 150 aa5.48□□□□□ -1.53
TMEM116-217ENST00000552801 TCL1BO95988 128 aa5.48□□□□□ -1.53
TMEM116-217ENST00000552801 SMAGPQ0VAQ4 97 aa5.48□□□□□ -1.53
TMEM116-217ENST00000552801 PPDPFLQ8WWR9 84 aa5.48□□□□□ -1.53
TMEM116-217ENST00000552801 SIGMAR1Q99720 223 aa5.48□□□□□ -1.53
TMEM116-217ENST00000552801 PPDPFQ9H3Y8 114 aa5.48□□□□□ -1.53
TMEM116-217ENST00000552801 SPINK6Q6UWN8 80 aa5.47□□□□□ -1.53
TMEM116-217ENST00000552801 Q6ZRP5 223 aa5.47□□□□□ -1.53
TMEM116-217ENST00000552801 FAT3Q8TDW7 4589 aa5.47□□□□□ -1.53
TMEM116-217ENST00000552801 A0A096LNI7 61 aa5.46□□□□□ -1.54
TMEM116-217ENST00000552801 TRBV30A0A0K0K1B3 111 aa5.46□□□□□ -1.54
TMEM116-217ENST00000552801 SYCNQ0VAF6 134 aa5.46□□□□□ -1.54
TMEM116-217ENST00000552801 GAGE2BQ13066 116 aa5.46□□□□□ -1.54
TMEM116-217ENST00000552801 Q6ZUT4 128 aa5.46□□□□□ -1.54
TMEM116-217ENST00000552801 CSDC2Q9Y534 153 aaKnown RBP5.46□□□□□ -1.54
TMEM116-217ENST00000552801 LOC107984156A0A0G2JMH3 177 aa5.45□□□□□ -1.54
TMEM116-217ENST00000552801 IGLV5-39A0A0G2JS06 123 aa5.45□□□□□ -1.54
TMEM116-217ENST00000552801 LINC00959A0A1B0GUT2 108 aa5.45□□□□□ -1.54
TMEM116-217ENST00000552801 NDUFA1O15239 70 aa5.45□□□□□ -1.54
TMEM116-217ENST00000552801 IFITM1P13164 125 aa5.45□□□□□ -1.54
TMEM116-217ENST00000552801 PSMB2P49721 201 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms