RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 UQCC3Q6UW78 93 aa5.68□□□□□ -1.5
LINC00661-207ENST00000552685 FSIP2Q5CZC0 6907 aa5.68□□□□□ -1.5
LINC00661-207ENST00000552685 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
LINC00661-207ENST00000552685 TMEM170BQ5T4T1 132 aa5.67□□□□□ -1.5
LINC00661-207ENST00000552685 BAGE3Q86Y29 109 aa5.67□□□□□ -1.5
LINC00661-207ENST00000552685 C18orf32Q8TCD1 76 aa5.67□□□□□ -1.5
LINC00661-207ENST00000552685 SEC11CQ9BY50 192 aa5.67□□□□□ -1.5
LINC00661-207ENST00000552685 PPDPFQ9H3Y8 114 aa5.67□□□□□ -1.5
LINC00661-207ENST00000552685 HBDP02042 147 aa5.66□□□□□ -1.5
LINC00661-207ENST00000552685 LINC00158P58513 81 aa5.66□□□□□ -1.5
LINC00661-207ENST00000552685 COX19Q49B96 90 aa5.66□□□□□ -1.5
LINC00661-207ENST00000552685 SPRR4Q96PI1 79 aa5.66□□□□□ -1.5
LINC00661-207ENST00000552685 RPS10P5Q9NQ39 176 aa5.66□□□□□ -1.5
LINC00661-207ENST00000552685 LINC00614P0C842 121 aa5.65□□□□□ -1.5
LINC00661-207ENST00000552685 COX17Q14061 63 aa5.65□□□□□ -1.5
LINC00661-207ENST00000552685 COMMD7Q86VX2 200 aa5.65□□□□□ -1.5
LINC00661-207ENST00000552685 DAND5Q8N907 189 aa5.65□□□□□ -1.5
LINC00661-207ENST00000552685 TRAPPC1Q9Y5R8 145 aa5.65□□□□□ -1.5
LINC00661-207ENST00000552685 NCR3O14931 201 aa5.63□□□□□ -1.51
LINC00661-207ENST00000552685 SMIM13P0DJ93 91 aa5.63□□□□□ -1.51
LINC00661-207ENST00000552685 Q8NBF4 154 aa5.63□□□□□ -1.51
LINC00661-207ENST00000552685 CHTOPQ9Y3Y2 248 aaKnown RBP5.63□□□□□ -1.51
LINC00661-207ENST00000552685 TMEM223A0PJW6 202 aa5.62□□□□□ -1.51
LINC00661-207ENST00000552685 RHEBQ15382 184 aa5.62□□□□□ -1.51
LINC00661-207ENST00000552685 C10orf91Q5T1B1 145 aa5.62□□□□□ -1.51
LINC00661-207ENST00000552685 BOD1L2Q8IYS8 172 aa5.62□□□□□ -1.51
LINC00661-207ENST00000552685 C4orf48Q5BLP8 95 aa5.61□□□□□ -1.51
LINC00661-207ENST00000552685 SMCR5Q8TEV8 140 aa5.61□□□□□ -1.51
LINC00661-207ENST00000552685 PRYO14603 147 aa5.6□□□□□ -1.51
LINC00661-207ENST00000552685 SPAG11AQ6PDA7 123 aa5.6□□□□□ -1.51
LINC00661-207ENST00000552685 SFTA2Q6UW10 78 aa5.6□□□□□ -1.51
LINC00661-207ENST00000552685 MIR7-3HGQ8N6C7 128 aa5.6□□□□□ -1.51
LINC00661-207ENST00000552685 ATP6V1G1O75348 118 aa5.59□□□□□ -1.51
LINC00661-207ENST00000552685 CTAG1AP78358 180 aa5.59□□□□□ -1.51
LINC00661-207ENST00000552685 KRTAP13-3Q3SY46 172 aa5.59□□□□□ -1.51
LINC00661-207ENST00000552685 MEIG1Q5JSS6 88 aa5.59□□□□□ -1.51
LINC00661-207ENST00000552685 LINC00337Q8N6G1 96 aa5.59□□□□□ -1.51
LINC00661-207ENST00000552685 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.51
LINC00661-207ENST00000552685 ZNF706Q9Y5V0 76 aaPredicted RBP5.59□□□□□ -1.51
LINC00661-207ENST00000552685 TRBV10-3A0A0K0K1G6 114 aa5.58□□□□□ -1.52
LINC00661-207ENST00000552685 ETDCA0A1B0GVM5 59 aa5.58□□□□□ -1.52
LINC00661-207ENST00000552685 KRTAP4-16G5E9R7 235 aaPredicted RBP5.58□□□□□ -1.52
LINC00661-207ENST00000552685 ERC2-IT1O76042 136 aa5.58□□□□□ -1.52
LINC00661-207ENST00000552685 SPRR1AP35321 89 aa5.58□□□□□ -1.52
LINC00661-207ENST00000552685 GAGE2AQ6NT46 116 aa5.58□□□□□ -1.52
LINC00661-207ENST00000552685 FP248Q71RG6 208 aaPredicted RBP5.58□□□□□ -1.52
LINC00661-207ENST00000552685 IFI27L1Q96BM0 104 aa5.58□□□□□ -1.52
LINC00661-207ENST00000552685 KCNQ1DNQ9H478 68 aa5.58□□□□□ -1.52
LINC00661-207ENST00000552685 IGLV9-49A0A0B4J1Y8 123 aa5.57□□□□□ -1.52
LINC00661-207ENST00000552685 TRAV12-1A0A0B4J245 112 aa5.57□□□□□ -1.52
LINC00661-207ENST00000552685 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
LINC00661-207ENST00000552685 H0Y8G0 127 aa5.56□□□□□ -1.52
LINC00661-207ENST00000552685 APOC3P02656 99 aa5.56□□□□□ -1.52
LINC00661-207ENST00000552685 TSPEAR-AS2P59090 65 aa5.56□□□□□ -1.52
LINC00661-207ENST00000552685 MOBPQ13875 183 aa5.56□□□□□ -1.52
LINC00661-207ENST00000552685 NDUFA12Q9UI09 145 aa5.56□□□□□ -1.52
LINC00661-207ENST00000552685 B5MCH6 92 aa5.55□□□□□ -1.52
LINC00661-207ENST00000552685 ASB16-AS1Q495Z4 193 aa5.55□□□□□ -1.52
LINC00661-207ENST00000552685 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
LINC00661-207ENST00000552685 FAM19A2Q8N3H0 131 aa5.55□□□□□ -1.52
LINC00661-207ENST00000552685 SPINK1P00995 79 aa5.54□□□□□ -1.52
LINC00661-207ENST00000552685 CHCHD1Q96BP2 118 aaKnown RBP5.54□□□□□ -1.52
LINC00661-207ENST00000552685 Q9BRP9 147 aa5.54□□□□□ -1.52
LINC00661-207ENST00000552685 MYMXA0A1B0GTQ4 84 aa5.53□□□□□ -1.52
LINC00661-207ENST00000552685 DDTP30046 118 aa5.53□□□□□ -1.52
LINC00661-207ENST00000552685 HERV-K104P63124 156 aa5.53□□□□□ -1.52
LINC00661-207ENST00000552685 YPEL4Q96NS1 127 aa5.53□□□□□ -1.52
LINC00661-207ENST00000552685 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
LINC00661-207ENST00000552685 Q8N377 158 aa5.52□□□□□ -1.53
LINC00661-207ENST00000552685 HSBP1O75506 76 aa5.51□□□□□ -1.53
LINC00661-207ENST00000552685 SNAPINO95295 136 aa5.51□□□□□ -1.53
LINC00661-207ENST00000552685 LINC01547P58512 204 aaPredicted RBP5.51□□□□□ -1.53
LINC00661-207ENST00000552685 MAP1LC3CQ9BXW4 147 aa5.51□□□□□ -1.53
LINC00661-207ENST00000552685 LINC00587B1AMM8 73 aa5.5□□□□□ -1.53
LINC00661-207ENST00000552685 LEPROTO15243 131 aa5.5□□□□□ -1.53
LINC00661-207ENST00000552685 SEC61BP60468 96 aaKnown RBP5.5□□□□□ -1.53
LINC00661-207ENST00000552685 NPC2P61916 151 aa5.5□□□□□ -1.53
LINC00661-207ENST00000552685 S100A12P80511 92 aa5.5□□□□□ -1.53
LINC00661-207ENST00000552685 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
LINC00661-207ENST00000552685 C9orf153Q5TBE3 101 aa5.5□□□□□ -1.53
LINC00661-207ENST00000552685 SVBPQ8N300 66 aa5.5□□□□□ -1.53
LINC00661-207ENST00000552685 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
LINC00661-207ENST00000552685 PMCHL2Q9BQD1 86 aa5.5□□□□□ -1.53
LINC00661-207ENST00000552685 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
LINC00661-207ENST00000552685 LINC00310P59036 64 aa5.49□□□□□ -1.53
LINC00661-207ENST00000552685 Q6ZRX8 168 aa5.49□□□□□ -1.53
LINC00661-207ENST00000552685 SSBP3-AS1Q7Z2R9 100 aa5.49□□□□□ -1.53
LINC00661-207ENST00000552685 LOC107984156A0A0G2JMH3 177 aa5.48□□□□□ -1.53
LINC00661-207ENST00000552685 TRBV10-2A0A0K0K1G8 114 aa5.48□□□□□ -1.53
LINC00661-207ENST00000552685 J3QQQ9 107 aa5.48□□□□□ -1.53
LINC00661-207ENST00000552685 SLC25A20O43772 301 aa5.48□□□□□ -1.53
LINC00661-207ENST00000552685 NDUFA5Q16718 116 aa5.48□□□□□ -1.53
LINC00661-207ENST00000552685 KRTAP19-2Q3LHN2 52 aa5.48□□□□□ -1.53
LINC00661-207ENST00000552685 S100A7L2Q5SY68 101 aa5.48□□□□□ -1.53
LINC00661-207ENST00000552685 SOSTDC1Q6X4U4 206 aa5.48□□□□□ -1.53
LINC00661-207ENST00000552685 ARL17AQ8IVW1 177 aa5.48□□□□□ -1.53
LINC00661-207ENST00000552685 SPANXB1Q9NS25 103 aaPredicted RBP5.48□□□□□ -1.53
LINC00661-207ENST00000552685 TRAV23DV6A0A075B6W5 121 aa5.47□□□□□ -1.53
LINC00661-207ENST00000552685 SERF1AO75920 110 aa5.47□□□□□ -1.53
LINC00661-207ENST00000552685 LEPROTL1O95214 131 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms