RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	KLKP1	Q107X0	134 aa		5.48	□□□□□ -1.53
RPH3A-223	ENST00000552352	C9orf66	Q5T8R8	295 aa		5.48	□□□□□ -1.53
RPH3A-223	ENST00000552352	C6orf223	Q8N319	242 aa		5.48	□□□□□ -1.53
RPH3A-223	ENST00000552352	C2CD3	Q4AC94	2353 aa		5.48	□□□□□ -1.53
RPH3A-223	ENST00000552352	IGHV4-28	A0A0C4DH34	117 aa		5.48	□□□□□ -1.53
RPH3A-223	ENST00000552352	RPL35A	P18077	110 aa	Known RBP	5.48	□□□□□ -1.53
RPH3A-223	ENST00000552352	KIAA0087	Q14695	138 aa		5.48	□□□□□ -1.53
RPH3A-223	ENST00000552352	LINC00612	Q8N6U2	182 aa		5.48	□□□□□ -1.53
RPH3A-223	ENST00000552352	WFDC10A	Q9H1F0	79 aa		5.48	□□□□□ -1.53
RPH3A-223	ENST00000552352	MRAP	Q8TCY5	172 aa		5.47	□□□□□ -1.53
RPH3A-223	ENST00000552352	HECTD1	Q9ULT8	2610 aa		5.47	□□□□□ -1.53
RPH3A-223	ENST00000552352	CCDC168	Q8NDH2	2452 aa		5.47	□□□□□ -1.53
RPH3A-223	ENST00000552352	INAFM1	C9JVW0	142 aa		5.47	□□□□□ -1.53
RPH3A-223	ENST00000552352	CXCL6	P80162	114 aa		5.47	□□□□□ -1.53
RPH3A-223	ENST00000552352	CLPSL2	Q6UWE3	100 aa		5.47	□□□□□ -1.53
RPH3A-223	ENST00000552352		Q6ZVQ6	151 aa		5.47	□□□□□ -1.53
RPH3A-223	ENST00000552352	LAMTOR3	Q9UHA4	124 aa		5.47	□□□□□ -1.53
RPH3A-223	ENST00000552352	SON	P18583	2426 aa	Known RBP	5.47	□□□□□ -1.53
RPH3A-223	ENST00000552352	GYPE	P15421	78 aa		5.46	□□□□□ -1.53
RPH3A-223	ENST00000552352	CD164L2	Q6UWJ8	174 aa		5.46	□□□□□ -1.53
RPH3A-223	ENST00000552352		Q8NDZ9	215 aa		5.46	□□□□□ -1.53
RPH3A-223	ENST00000552352	TLN2	Q9Y4G6	2542 aa		5.46	□□□□□ -1.54
RPH3A-223	ENST00000552352		H3BQ85	93 aa		5.46	□□□□□ -1.54
RPH3A-223	ENST00000552352	PDE6G	P18545	87 aa		5.46	□□□□□ -1.54
RPH3A-223	ENST00000552352	NOTCH3	Q9UM47	2321 aa		5.46	□□□□□ -1.54
RPH3A-223	ENST00000552352		M0R2N4	97 aa		5.45	□□□□□ -1.54
RPH3A-223	ENST00000552352	HAMP	P81172	84 aa		5.45	□□□□□ -1.54
RPH3A-223	ENST00000552352	BAHCC1	Q9P281	2608 aa		5.45	□□□□□ -1.54
RPH3A-223	ENST00000552352	TRAV10	A0A0B4J240	114 aa		5.45	□□□□□ -1.54
RPH3A-223	ENST00000552352	DEFB130B	P0DP73	79 aa		5.45	□□□□□ -1.54
RPH3A-223	ENST00000552352	DEFB130A	P0DP74	79 aa		5.45	□□□□□ -1.54
RPH3A-223	ENST00000552352	C9orf116	Q5BN46	136 aa	Predicted RBP	5.45	□□□□□ -1.54
RPH3A-223	ENST00000552352	HIVEP2	P31629	2446 aa		5.45	□□□□□ -1.54
RPH3A-223	ENST00000552352	MUC7	Q8TAX7	377 aa		5.44	□□□□□ -1.54
RPH3A-223	ENST00000552352	LOR	P23490	312 aa	Predicted RBP	5.44	□□□□□ -1.54
RPH3A-223	ENST00000552352	LINC00269	Q8N2A0	174 aa		5.44	□□□□□ -1.54
RPH3A-223	ENST00000552352	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.44	□□□□□ -1.54
RPH3A-223	ENST00000552352	FLNB	O75369	2602 aa	Known RBP	5.44	□□□□□ -1.54
RPH3A-223	ENST00000552352	IGLV6-57	P01721	117 aa		5.43	□□□□□ -1.54
RPH3A-223	ENST00000552352	SETX	Q7Z333	2677 aa	Known RBP	5.43	□□□□□ -1.54
RPH3A-223	ENST00000552352	NDUFC1	O43677	76 aa		5.43	□□□□□ -1.54
RPH3A-223	ENST00000552352		Q6ZQY7	126 aa		5.43	□□□□□ -1.54
RPH3A-223	ENST00000552352	RMI2	Q96E14	147 aa		5.43	□□□□□ -1.54
RPH3A-223	ENST00000552352	SNURF	Q9Y675	71 aa		5.43	□□□□□ -1.54
RPH3A-223	ENST00000552352	SMIM26	A0A096LP01	95 aa		5.42	□□□□□ -1.54
RPH3A-223	ENST00000552352		F8WEM9	126 aa		5.42	□□□□□ -1.54
RPH3A-223	ENST00000552352	PRO0628	Q9UI54	55 aa		5.42	□□□□□ -1.54
RPH3A-223	ENST00000552352	PRO0255	Q9UI72	69 aa		5.42	□□□□□ -1.54
RPH3A-223	ENST00000552352	LYRM9	A8MSI8	78 aa		5.42	□□□□□ -1.54
RPH3A-223	ENST00000552352		Q8N3U1	123 aa		5.42	□□□□□ -1.54
RPH3A-223	ENST00000552352		X6R8D5	127 aa		5.42	□□□□□ -1.54
RPH3A-223	ENST00000552352	ACAN	P16112	2415 aa		5.42	□□□□□ -1.54
RPH3A-223	ENST00000552352	ITPR2	Q14571	2701 aa		5.42	□□□□□ -1.54
RPH3A-223	ENST00000552352	IGLV10-54	A0A075B6I4	117 aa		5.41	□□□□□ -1.54
RPH3A-223	ENST00000552352		A0A096LPF7	62 aa		5.41	□□□□□ -1.54
RPH3A-223	ENST00000552352	ATP5E	P56381	51 aa	Predicted RBP	5.41	□□□□□ -1.54
RPH3A-223	ENST00000552352	REG3A	Q06141	175 aa		5.41	□□□□□ -1.54
RPH3A-223	ENST00000552352	TRBV7-4	A0A0J9YYF1	115 aa		5.41	□□□□□ -1.54
RPH3A-223	ENST00000552352	ANG	P03950	147 aa	Known RBP	5.41	□□□□□ -1.54
RPH3A-223	ENST00000552352	APOC4	P55056	127 aa		5.41	□□□□□ -1.54
RPH3A-223	ENST00000552352	SPATA3	Q8NHX4	192 aa		5.41	□□□□□ -1.54
RPH3A-223	ENST00000552352	LINC00336	Q6ZUF6	198 aa		5.4	□□□□□ -1.54
RPH3A-223	ENST00000552352	FP248	Q71RG6	208 aa	Predicted RBP	5.4	□□□□□ -1.54
RPH3A-223	ENST00000552352	WNK1	Q9H4A3	2382 aa		5.4	□□□□□ -1.54
RPH3A-223	ENST00000552352		A0A0J9YWU9	116 aa		5.4	□□□□□ -1.55
RPH3A-223	ENST00000552352	IGHV4-30-4	P0DP06	118 aa		5.4	□□□□□ -1.55
RPH3A-223	ENST00000552352	SPAG11B	Q08648	103 aa		5.4	□□□□□ -1.55
RPH3A-223	ENST00000552352	C10orf25	Q5T742	122 aa		5.4	□□□□□ -1.55
RPH3A-223	ENST00000552352	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.4	□□□□□ -1.55
RPH3A-223	ENST00000552352	TM2D3	Q9BRN9	247 aa		5.4	□□□□□ -1.55
RPH3A-223	ENST00000552352	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.39	□□□□□ -1.55
RPH3A-223	ENST00000552352	DIRC1	Q969H9	104 aa		5.39	□□□□□ -1.55
RPH3A-223	ENST00000552352	CUBN	O60494	3623 aa		5.39	□□□□□ -1.55
RPH3A-223	ENST00000552352	MIF	P14174	115 aa		5.39	□□□□□ -1.55
RPH3A-223	ENST00000552352	JMJD1C	Q15652	2540 aa		5.39	□□□□□ -1.55
RPH3A-223	ENST00000552352	NIPBL	Q6KC79	2804 aa	eCLIP	5.38	□□□□□ -1.55
RPH3A-223	ENST00000552352	TRBV7-6	A0A0J9YX20	115 aa		5.38	□□□□□ -1.55
RPH3A-223	ENST00000552352	ERC2-IT1	O76042	136 aa		5.38	□□□□□ -1.55
RPH3A-223	ENST00000552352	NREP	Q16612	68 aa		5.38	□□□□□ -1.55
RPH3A-223	ENST00000552352	CYSRT1	A8MQ03	144 aa		5.38	□□□□□ -1.55
RPH3A-223	ENST00000552352	MTOR	P42345	2549 aa		5.38	□□□□□ -1.55
RPH3A-223	ENST00000552352	NOTCH2	Q04721	2471 aa		5.37	□□□□□ -1.55
RPH3A-223	ENST00000552352	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.37	□□□□□ -1.55
RPH3A-223	ENST00000552352	SCX	Q7RTU7	201 aa		5.37	□□□□□ -1.55
RPH3A-223	ENST00000552352	BPY2	O14599	106 aa		5.37	□□□□□ -1.55
RPH3A-223	ENST00000552352	ZNF73	O43830	326 aa	Predicted RBP	5.37	□□□□□ -1.55
RPH3A-223	ENST00000552352	COX7B	P24311	80 aa		5.37	□□□□□ -1.55
RPH3A-223	ENST00000552352	ELOF1	P60002	83 aa	Known RBP	5.37	□□□□□ -1.55
RPH3A-223	ENST00000552352	TMEM254	Q8TBM7	123 aa		5.37	□□□□□ -1.55
RPH3A-223	ENST00000552352	SEC61G	P60059	68 aa		5.36	□□□□□ -1.55
RPH3A-223	ENST00000552352	FN1	P02751	2386 aa	Known RBP	5.35	□□□□□ -1.55
RPH3A-223	ENST00000552352		Q8NAQ8	132 aa		5.35	□□□□□ -1.55
RPH3A-223	ENST00000552352	OTOG	Q6ZRI0	2925 aa		5.35	□□□□□ -1.55
RPH3A-223	ENST00000552352	LINC00474	Q9P2X8	69 aa		5.35	□□□□□ -1.55
RPH3A-223	ENST00000552352	NSD1	Q96L73	2696 aa	Predicted RBP	5.34	□□□□□ -1.55
RPH3A-223	ENST00000552352	C6orf48	Q9UBA6	75 aa		5.34	□□□□□ -1.55
RPH3A-223	ENST00000552352	PRR34	Q9NV39	138 aa		5.34	□□□□□ -1.56
RPH3A-223	ENST00000552352	IGKV4-1	P06312	121 aa		5.33	□□□□□ -1.56
RPH3A-223	ENST00000552352	EGFEM1P	Q0D2K5	195 aa		5.33	□□□□□ -1.56
RPH3A-223	ENST00000552352	XAGE1A	Q9HD64	81 aa		5.33	□□□□□ -1.56

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