RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 PLCE1Q9P212 2302 aa3.86□□□□□ -1.79
PPFIA2-226ENST00000552020 CLPSL1A2RUU4 121 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 SMIM9A6NGZ8 99 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 KLLNB2CW77 178 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 F5H768 121 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 EMP1P54849 157 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 LINC00315P59091 139 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 BSPH1Q075Z2 132 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 SYCNQ0VAF6 134 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 LINC00337Q8N6G1 96 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 DCANP1Q8TF63 244 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 USMG5Q96IX5 58 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 RYR2Q92736 4967 aa3.85□□□□□ -1.79
PPFIA2-226ENST00000552020 A0A096LNT2 108 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 NDUFA1O15239 70 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 NDUFC2O95298 119 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 IGHV3-30-3P0DP02 117 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 TSPEAR-AS2P59090 65 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 HERVK_113P63121 156 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 Q6JHZ5 121 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 Q6ZQT7 251 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 FAM19A3Q7Z5A8 133 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 C15orf56Q8N910 161 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 RPL39LQ96EH5 51 aaKnown RBP3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 C8orf17Q9NRJ1 99 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 RBM12B-AS1Q9P1G2 102 aa3.84□□□□□ -1.79
PPFIA2-226ENST00000552020 RYR1P21817 5038 aa3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 TRAV13-2A0A0B4J235 113 aa3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 TRBV10-3A0A0K0K1G6 114 aa3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 BPY2O14599 106 aa3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 APELAP0DMC3 54 aa3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 RNASE3P12724 160 aaKnown RBP3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 KRTAP10-6P60371 365 aaPredicted RBP3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 RNASE13Q5GAN3 156 aaKnown RBP3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 VMO1Q7Z5L0 202 aa3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 SERP2Q8N6R1 65 aa3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 NDUFA12Q9UI09 145 aa3.83□□□□□ -1.8
PPFIA2-226ENST00000552020 IGHV3-49A0A0A0MS15 119 aa3.82□□□□□ -1.8
PPFIA2-226ENST00000552020 H0YGX0 51 aa3.82□□□□□ -1.8
PPFIA2-226ENST00000552020 H3BQ85 93 aa3.82□□□□□ -1.8
PPFIA2-226ENST00000552020 M0QY20 66 aa3.82□□□□□ -1.8
PPFIA2-226ENST00000552020 DNAL4O96015 105 aa3.82□□□□□ -1.8
PPFIA2-226ENST00000552020 ATP5EP56381 51 aaPredicted RBP3.82□□□□□ -1.8
PPFIA2-226ENST00000552020 NTM-AS1Q6ZSK4 140 aa3.82□□□□□ -1.8
PPFIA2-226ENST00000552020 TRAV8-3A0A0A6YYJ7 113 aa3.81□□□□□ -1.8
PPFIA2-226ENST00000552020 hADV29S1A0JD25 119 aa3.81□□□□□ -1.8
PPFIA2-226ENST00000552020 PLXNB1O43157 2135 aa3.81□□□□□ -1.8
PPFIA2-226ENST00000552020 LINC00694P0DN24 101 aa3.81□□□□□ -1.8
PPFIA2-226ENST00000552020 CD28P10747 220 aa3.81□□□□□ -1.8
PPFIA2-226ENST00000552020 C4orf26Q17RF5 130 aa3.81□□□□□ -1.8
PPFIA2-226ENST00000552020 DEFB116Q30KQ4 102 aa3.81□□□□□ -1.8
PPFIA2-226ENST00000552020 LINC00467Q9BRT7 94 aa3.81□□□□□ -1.8
PPFIA2-226ENST00000552020 LINC00527Q9UJ94 153 aa3.81□□□□□ -1.8
PPFIA2-226ENST00000552020 ZNF706Q9Y5V0 76 aaPredicted RBP3.81□□□□□ -1.8
PPFIA2-226ENST00000552020 DYNC2H1Q8NCM8 4307 aaKnown RBP3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 E7EQL1 145 aa3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 PANO1I0J062 215 aa3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 PRB2P02812 416 aaPredicted RBP3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 PSMB8P28062 276 aa3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 RPL28P46779 137 aaKnown RBP3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 SNRPD3P62318 126 aaKnown RBP3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 PRR9Q5T870 116 aa3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 FAM19A5Q7Z5A7 132 aaPredicted RBP3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 DAZ1Q9NQZ3 744 aaKnown RBP3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
PPFIA2-226ENST00000552020 PCLOQ9Y6V0 5065 aa3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 TRAV41A0A0B4J266 112 aa3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 JMJD7-PLA2G4BH0Y9G9 81 aa3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 H7C2G1 150 aa3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 NDUFC1O43677 76 aa3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 RPL39P62891 51 aaKnown RBP3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 CIRBP-AS1Q8TBR5 109 aa3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 LINC00308Q8TCZ7 52 aa3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 OBSCN-AS1Q96MR7 158 aa3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 TENM3Q9P273 2699 aa3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 ARFGEF3Q5TH69 2177 aa3.79□□□□□ -1.8
PPFIA2-226ENST00000552020 CRPP02741 224 aa3.78□□□□□ -1.8
PPFIA2-226ENST00000552020 BAALC-AS2P0C853 105 aa3.78□□□□□ -1.8
PPFIA2-226ENST00000552020 CMC4P56277 68 aaPredicted RBP3.78□□□□□ -1.8
PPFIA2-226ENST00000552020 DAZ4Q86SG3 579 aaKnown RBP3.78□□□□□ -1.8
PPFIA2-226ENST00000552020 C5orf56Q8N8D9 126 aa3.78□□□□□ -1.8
PPFIA2-226ENST00000552020 DPH3Q96FX2 82 aa3.78□□□□□ -1.8
PPFIA2-226ENST00000552020 SND1-IT1Q9HBX3 110 aa3.78□□□□□ -1.8
PPFIA2-226ENST00000552020 HERC2O95714 4834 aa3.78□□□□□ -1.8
PPFIA2-226ENST00000552020 LOC107984640A0A0U1RRK4 108 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 A8MTW9 85 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 IGHG2P01859 326 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 NPC2P61916 151 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 MUC7Q8TAX7 377 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 C10orf105Q8TEF2 133 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 CLEC2BQ92478 149 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 UPK3BQ9BT76 320 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 CHCHD7Q9BUK0 85 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 SERP1Q9Y6X1 66 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 DNAH1Q9P2D7 4330 aa3.77□□□□□ -1.81
PPFIA2-226ENST00000552020 TRAV13-1A0A0B4J241 112 aa3.76□□□□□ -1.81
PPFIA2-226ENST00000552020 TRBV10-1A0A0K0K1A3 114 aa3.76□□□□□ -1.81
PPFIA2-226ENST00000552020 C8orf87E5RJ46 101 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms