RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 HERVK_113P61574 105 aa6.07□□□□□ -1.44
SLC48A1-209ENST00000552003 SMIM1B2RUZ4 78 aa6.06□□□□□ -1.44
SLC48A1-209ENST00000552003 ORAOV1Q8WV07 137 aa6.06□□□□□ -1.44
SLC48A1-209ENST00000552003 IGLV1-50A0A075B6I6 118 aa6.05□□□□□ -1.44
SLC48A1-209ENST00000552003 GVQW2A0A096LPI5 108 aaPredicted RBP6.05□□□□□ -1.44
SLC48A1-209ENST00000552003 TMEM223A0PJW6 202 aa6.05□□□□□ -1.44
SLC48A1-209ENST00000552003 PRSS2P07478 247 aa6.05□□□□□ -1.44
SLC48A1-209ENST00000552003 SPINK8P0C7L1 97 aa6.05□□□□□ -1.44
SLC48A1-209ENST00000552003 SPAG11BQ08648 103 aa6.04□□□□□ -1.44
SLC48A1-209ENST00000552003 JOSD1Q15040 202 aaPredicted RBP6.04□□□□□ -1.44
SLC48A1-209ENST00000552003 HIGD2BQ4VC39 106 aa6.04□□□□□ -1.44
SLC48A1-209ENST00000552003 USH2AO75445 5202 aa6.04□□□□□ -1.44
SLC48A1-209ENST00000552003 IGLV5-39A0A0G2JS06 123 aa6.03□□□□□ -1.44
SLC48A1-209ENST00000552003 A0A1W2PNN7 141 aa6.03□□□□□ -1.44
SLC48A1-209ENST00000552003 HSBP1L1C9JCN9 74 aa6.03□□□□□ -1.44
SLC48A1-209ENST00000552003 F8WDY8 70 aa6.03□□□□□ -1.44
SLC48A1-209ENST00000552003 Q8IZM0 81 aa6.03□□□□□ -1.44
SLC48A1-209ENST00000552003 ATOH7Q8N100 152 aa6.03□□□□□ -1.44
SLC48A1-209ENST00000552003 COX7B2Q8TF08 81 aa6.03□□□□□ -1.44
SLC48A1-209ENST00000552003 TOMM7Q9P0U1 55 aa6.03□□□□□ -1.44
SLC48A1-209ENST00000552003 H0Y9J4 135 aa6.02□□□□□ -1.45
SLC48A1-209ENST00000552003 LEPROTO15243 131 aa6.02□□□□□ -1.45
SLC48A1-209ENST00000552003 CXCL5P42830 114 aa6.02□□□□□ -1.45
SLC48A1-209ENST00000552003 C1orf137Q5JT78 98 aa6.02□□□□□ -1.45
SLC48A1-209ENST00000552003 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
SLC48A1-209ENST00000552003 PLEKHB2Q96CS7 222 aa6.02□□□□□ -1.45
SLC48A1-209ENST00000552003 C2orf48Q96LS8 159 aa6.02□□□□□ -1.45
SLC48A1-209ENST00000552003 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
SLC48A1-209ENST00000552003 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
SLC48A1-209ENST00000552003 E9PLD3 99 aa6.01□□□□□ -1.45
SLC48A1-209ENST00000552003 NDUFA1O15239 70 aa6.01□□□□□ -1.45
SLC48A1-209ENST00000552003 CKS1BP61024 79 aa6.01□□□□□ -1.45
SLC48A1-209ENST00000552003 C6orf226Q5I0X4 101 aa6.01□□□□□ -1.45
SLC48A1-209ENST00000552003 SFTA2Q6UW10 78 aa6.01□□□□□ -1.45
SLC48A1-209ENST00000552003 CAMK2N2Q96S95 79 aa6.01□□□□□ -1.45
SLC48A1-209ENST00000552003 LOC105371267A0A1B0GV96 52 aa6□□□□□ -1.45
SLC48A1-209ENST00000552003 IGLV7-43P04211 117 aa6□□□□□ -1.45
SLC48A1-209ENST00000552003 LGALS3P17931 250 aaKnown RBP6□□□□□ -1.45
SLC48A1-209ENST00000552003 KIAA0087Q14695 138 aa6□□□□□ -1.45
SLC48A1-209ENST00000552003 PYY3Q5JQD4 70 aa6□□□□□ -1.45
SLC48A1-209ENST00000552003 DIRC1Q969H9 104 aa6□□□□□ -1.45
SLC48A1-209ENST00000552003 RETNLBQ9BQ08 111 aa6□□□□□ -1.45
SLC48A1-209ENST00000552003 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
SLC48A1-209ENST00000552003 J3QQQ9 107 aa5.99□□□□□ -1.45
SLC48A1-209ENST00000552003 NMUP48645 174 aa5.99□□□□□ -1.45
SLC48A1-209ENST00000552003 SYCNQ0VAF6 134 aa5.99□□□□□ -1.45
SLC48A1-209ENST00000552003 LINC00526Q96FQ7 95 aa5.99□□□□□ -1.45
SLC48A1-209ENST00000552003 CARD19Q96LW7 228 aa5.99□□□□□ -1.45
SLC48A1-209ENST00000552003 VAMP8Q9BV40 100 aa5.99□□□□□ -1.45
SLC48A1-209ENST00000552003 SMIM6P0DI80 62 aa5.98□□□□□ -1.45
SLC48A1-209ENST00000552003 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
SLC48A1-209ENST00000552003 PHF5AQ7RTV0 110 aaKnown RBP5.98□□□□□ -1.45
SLC48A1-209ENST00000552003 NDUFA12Q9UI09 145 aa5.98□□□□□ -1.45
SLC48A1-209ENST00000552003 PKIGQ9Y2B9 76 aa5.98□□□□□ -1.45
SLC48A1-209ENST00000552003 TRBV30A0A0K0K1B3 111 aa5.97□□□□□ -1.45
SLC48A1-209ENST00000552003 MYMXA0A1B0GTQ4 84 aa5.97□□□□□ -1.45
SLC48A1-209ENST00000552003 TSPEAR-AS2P59090 65 aa5.97□□□□□ -1.45
SLC48A1-209ENST00000552003 HERV-K104P63124 156 aa5.97□□□□□ -1.45
SLC48A1-209ENST00000552003 MT1HP80294 61 aa5.97□□□□□ -1.45
SLC48A1-209ENST00000552003 TPRXLQ17RH7 258 aa5.97□□□□□ -1.45
SLC48A1-209ENST00000552003 RNF151Q2KHN1 245 aa5.97□□□□□ -1.45
SLC48A1-209ENST00000552003 C2orf82Q6UX34 121 aa5.97□□□□□ -1.45
SLC48A1-209ENST00000552003 LINC00474Q9P2X8 69 aa5.97□□□□□ -1.45
SLC48A1-209ENST00000552003 IGKV2D-26A0A0A0MRZ7 120 aa5.96□□□□□ -1.46
SLC48A1-209ENST00000552003 S100A12P80511 92 aa5.96□□□□□ -1.46
SLC48A1-209ENST00000552003 SPATA45Q537H7 98 aa5.96□□□□□ -1.46
SLC48A1-209ENST00000552003 XP32Q5T750 250 aa5.96□□□□□ -1.46
SLC48A1-209ENST00000552003 UNQ6190/PRO20217Q6UXQ8 127 aa5.96□□□□□ -1.46
SLC48A1-209ENST00000552003 ZNF625Q96I27 306 aaPredicted RBP5.96□□□□□ -1.46
SLC48A1-209ENST00000552003 PAM16Q9Y3D7 125 aa5.96□□□□□ -1.46
SLC48A1-209ENST00000552003 ZNF815PA8K554 130 aa5.95□□□□□ -1.46
SLC48A1-209ENST00000552003 C10orf25Q5T742 122 aa5.95□□□□□ -1.46
SLC48A1-209ENST00000552003 C6orf48Q9UBA6 75 aa5.95□□□□□ -1.46
SLC48A1-209ENST00000552003 LOC107984640A0A0U1RRK4 108 aa5.94□□□□□ -1.46
SLC48A1-209ENST00000552003 LINC00587B1AMM8 73 aa5.94□□□□□ -1.46
SLC48A1-209ENST00000552003 CRYGAP11844 174 aa5.94□□□□□ -1.46
SLC48A1-209ENST00000552003 RPL13AP40429 203 aaKnown RBP5.94□□□□□ -1.46
SLC48A1-209ENST00000552003 KRTAP10-6P60371 365 aaPredicted RBP5.94□□□□□ -1.46
SLC48A1-209ENST00000552003 ERG28Q9UKR5 140 aa5.94□□□□□ -1.46
SLC48A1-209ENST00000552003 TRIAP1O43715 76 aa5.93□□□□□ -1.46
SLC48A1-209ENST00000552003 COX17Q14061 63 aa5.93□□□□□ -1.46
SLC48A1-209ENST00000552003 C9orf116Q5BN46 136 aaPredicted RBP5.93□□□□□ -1.46
SLC48A1-209ENST00000552003 MEIG1Q5JSS6 88 aa5.93□□□□□ -1.46
SLC48A1-209ENST00000552003 NDUFC2-KCTD14E9PQ53 114 aa5.92□□□□□ -1.46
SLC48A1-209ENST00000552003 TLX1NBP0CAT3 122 aa5.92□□□□□ -1.46
SLC48A1-209ENST00000552003 COX8AP10176 69 aa5.92□□□□□ -1.46
SLC48A1-209ENST00000552003 GAGE2BQ13066 116 aa5.92□□□□□ -1.46
SLC48A1-209ENST00000552003 SCGB1D4Q6XE38 83 aa5.92□□□□□ -1.46
SLC48A1-209ENST00000552003 PCP2Q8IVA1 136 aa5.92□□□□□ -1.46
SLC48A1-209ENST00000552003 TTTY13Q9BZ97 58 aa5.92□□□□□ -1.46
SLC48A1-209ENST00000552003 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
SLC48A1-209ENST00000552003 A0A087X002 238 aa5.91□□□□□ -1.46
SLC48A1-209ENST00000552003 A0A0J9YXY3 114 aa5.91□□□□□ -1.46
SLC48A1-209ENST00000552003 DLEU1O43261 78 aa5.91□□□□□ -1.46
SLC48A1-209ENST00000552003 TIMM17BO60830 172 aa5.91□□□□□ -1.46
SLC48A1-209ENST00000552003 PFN2P35080 140 aa5.91□□□□□ -1.46
SLC48A1-209ENST00000552003 LINC00158P58513 81 aa5.91□□□□□ -1.46
SLC48A1-209ENST00000552003 RPL18AQ02543 176 aaKnown RBP5.91□□□□□ -1.46
SLC48A1-209ENST00000552003 IGLV7-46A0A075B6I9 117 aa5.9□□□□□ -1.46
SLC48A1-209ENST00000552003 TMEM238C9JI98 176 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms