RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 C15orf56Q8N910 161 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 CHAC1Q9BUX1 264 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 MRPL35Q9NZE8 188 aaKnown RBP4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 CDKN2A-AS1Q9UH64 79 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 IGHV3-64A0A075B6Q5 118 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 GVQW2A0A096LPI5 108 aaPredicted RBP4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 A0A0U1RQV1 116 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 C11orf86A6NJI1 115 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 H0Y8G0 127 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 H3BRM9 83 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 DPM2O94777 84 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 ZNF22P17026 224 aaPredicted RBP4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 AKR1D1P51857 326 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 KRTDAPP60985 99 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 WFDC2Q14508 124 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 C5orf38Q86SI9 138 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 LINC00469Q8N7U9 141 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 OR10D4PQ8NGN7 298 aa4.12□□□□□ -1.75
DEPDC4-210ENST00000551642 MUC17Q685J3 4493 aa4.11□□□□□ -1.75
DEPDC4-210ENST00000551642 A0A087X002 238 aa4.11□□□□□ -1.75
DEPDC4-210ENST00000551642 KRTAP16-1A8MUX0 517 aa4.11□□□□□ -1.75
DEPDC4-210ENST00000551642 LECT2O14960 151 aa4.11□□□□□ -1.75
DEPDC4-210ENST00000551642 IGKCP01834 107 aa4.11□□□□□ -1.75
DEPDC4-210ENST00000551642 TMEM170BQ5T4T1 132 aa4.11□□□□□ -1.75
DEPDC4-210ENST00000551642 Q8N814 137 aa4.11□□□□□ -1.75
DEPDC4-210ENST00000551642 TMEM223A0PJW6 202 aa4.1□□□□□ -1.75
DEPDC4-210ENST00000551642 C20orf202A1L168 122 aa4.1□□□□□ -1.75
DEPDC4-210ENST00000551642 F8WDY8 70 aa4.1□□□□□ -1.75
DEPDC4-210ENST00000551642 KIAA0087Q14695 138 aa4.1□□□□□ -1.75
DEPDC4-210ENST00000551642 Q6ZSA8 131 aa4.1□□□□□ -1.75
DEPDC4-210ENST00000551642 Q8IZM0 81 aa4.1□□□□□ -1.75
DEPDC4-210ENST00000551642 ORAOV1Q8WV07 137 aa4.1□□□□□ -1.75
DEPDC4-210ENST00000551642 C2orf48Q96LS8 159 aa4.1□□□□□ -1.75
DEPDC4-210ENST00000551642 PMCHL2Q9BQD1 86 aa4.1□□□□□ -1.75
DEPDC4-210ENST00000551642 SPINK8P0C7L1 97 aa4.09□□□□□ -1.75
DEPDC4-210ENST00000551642 CNBPP62633 177 aaKnown RBP4.09□□□□□ -1.75
DEPDC4-210ENST00000551642 SPAG11BQ08648 103 aa4.09□□□□□ -1.75
DEPDC4-210ENST00000551642 HIGD2BQ4VC39 106 aa4.09□□□□□ -1.75
DEPDC4-210ENST00000551642 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.76
DEPDC4-210ENST00000551642 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.08□□□□□ -1.76
DEPDC4-210ENST00000551642 CXCL5P42830 114 aa4.08□□□□□ -1.76
DEPDC4-210ENST00000551642 HERVK_113P61574 105 aa4.08□□□□□ -1.76
DEPDC4-210ENST00000551642 C6orf226Q5I0X4 101 aa4.08□□□□□ -1.76
DEPDC4-210ENST00000551642 SFTA2Q6UW10 78 aa4.08□□□□□ -1.76
DEPDC4-210ENST00000551642 COX7B2Q8TF08 81 aa4.08□□□□□ -1.76
DEPDC4-210ENST00000551642 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 E9PLD3 99 aa4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 NDUFA1O15239 70 aa4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 LEPROTO15243 131 aa4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 CTAG1AP78358 180 aa4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 SYCNQ0VAF6 134 aa4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 JOSD1Q15040 202 aaPredicted RBP4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 C9orf163Q8N9P6 203 aa4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 LINC00526Q96FQ7 95 aa4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 TOMM7Q9P0U1 55 aa4.07□□□□□ -1.76
DEPDC4-210ENST00000551642 TRBV30A0A0K0K1B3 111 aa4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 SCGB1D1O95968 90 aa4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 CKS1BP61024 79 aa4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 Q6ZRU5 148 aa4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 SCXQ7RTU7 201 aa4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 ATOH7Q8N100 152 aa4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 PLEKHB2Q96CS7 222 aa4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 ZNF625Q96I27 306 aaPredicted RBP4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 CARD19Q96LW7 228 aa4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 CAMK2N2Q96S95 79 aa4.06□□□□□ -1.76
DEPDC4-210ENST00000551642 J3QQQ9 107 aa4.05□□□□□ -1.76
DEPDC4-210ENST00000551642 TLX1NBP0CAT3 122 aa4.05□□□□□ -1.76
DEPDC4-210ENST00000551642 NMUP48645 174 aa4.05□□□□□ -1.76
DEPDC4-210ENST00000551642 C2orf82Q6UX34 121 aa4.05□□□□□ -1.76
DEPDC4-210ENST00000551642 UNQ6190/PRO20217Q6UXQ8 127 aa4.05□□□□□ -1.76
DEPDC4-210ENST00000551642 C6orf48Q9UBA6 75 aa4.05□□□□□ -1.76
DEPDC4-210ENST00000551642 PKIGQ9Y2B9 76 aa4.05□□□□□ -1.76
DEPDC4-210ENST00000551642 IGKV2D-26A0A0A0MRZ7 120 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 HSBP1L1C9JCN9 74 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 TSPEAR-AS2P59090 65 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 HERV-K104P63124 156 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 GAGE2BQ13066 116 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 GAGE2EQ4V326 116 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 PYY3Q5JQD4 70 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 GAGE2AQ6NT46 116 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 SDIM1Q6ZPB5 146 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 GAGE2DQ9UEU5 116 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 NDUFA12Q9UI09 145 aa4.04□□□□□ -1.76
DEPDC4-210ENST00000551642 LOC107984640A0A0U1RRK4 108 aa4.03□□□□□ -1.76
DEPDC4-210ENST00000551642 MYMXA0A1B0GTQ4 84 aa4.03□□□□□ -1.76
DEPDC4-210ENST00000551642 LOC105371267A0A1B0GV96 52 aa4.03□□□□□ -1.76
DEPDC4-210ENST00000551642 LGALS3P17931 250 aaKnown RBP4.03□□□□□ -1.76
DEPDC4-210ENST00000551642 COX17Q14061 63 aa4.03□□□□□ -1.76
DEPDC4-210ENST00000551642 MAJINQ3KP22 176 aa4.03□□□□□ -1.76
DEPDC4-210ENST00000551642 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
DEPDC4-210ENST00000551642 LINC00587B1AMM8 73 aa4.02□□□□□ -1.77
DEPDC4-210ENST00000551642 NDUFC2-KCTD14E9PQ53 114 aa4.02□□□□□ -1.77
DEPDC4-210ENST00000551642 LINC01620Q4KN68 170 aa4.02□□□□□ -1.77
DEPDC4-210ENST00000551642 C9orf116Q5BN46 136 aaPredicted RBP4.02□□□□□ -1.77
DEPDC4-210ENST00000551642 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
DEPDC4-210ENST00000551642 VAMP8Q9BV40 100 aa4.02□□□□□ -1.77
DEPDC4-210ENST00000551642 LINC00474Q9P2X8 69 aa4.02□□□□□ -1.77
DEPDC4-210ENST00000551642 ERG28Q9UKR5 140 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms