RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 STOML3Q8TAV4 291 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 PLEKHB2Q96CS7 222 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 YPEL4Q96NS1 127 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 AP1S3Q96PC3 154 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 IMMP2LQ96T52 175 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 RETNLBQ9BQ08 111 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 TP73-AS1Q9UF72 201 aa1.23□□□□□ -2.21
CPSF6-207ENST00000551516 SPRR5A0A1B0GTR4 108 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 A0A1B0GXF2 115 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 C1orf196B1AJZ1 125 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 I3L3M4 83 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 MT-ND6P03923 174 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 SCGB1C2P0DMR2 95 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 AKR1C3P42330 323 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 COTL1Q14019 142 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 ZNF345Q14585 488 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 TMEM241Q24JQ0 296 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 CENPWQ5EE01 88 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 SPANXN1Q5VSR9 72 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 C2orf82Q6UX34 121 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 C5orf38Q86SI9 138 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 C3orf22Q8N5N4 141 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 LINC00337Q8N6G1 96 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 OR2D3Q8NGH3 330 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 OR10D4PQ8NGN7 298 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 TSKUQ8WUA8 353 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 AMELXQ99217 191 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 ANAPC13Q9BS18 74 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 TMEM191AQ9H0A3 160 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 SND1-IT1Q9HBX3 110 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 TMEM242Q9NWH2 141 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 C22orf24Q9Y442 160 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 MUC12Q9UKN1 5478 aa1.22□□□□□ -2.21
CPSF6-207ENST00000551516 MDN1Q9NU22 5596 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 KMT2DO14686 5537 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 IGIPA6NJ69 53 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 HMSDA8MTL9 139 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 SMLR1H3BR10 107 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 M0R378 163 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 COX7A2LO14548 114 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 BCE1O60756 84 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 PET100P0DJ07 73 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 CRYGAP11844 174 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 SPRR1AP35321 89 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 SULT1A2P50226 295 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 UBE2D1P51668 147 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 RPS20P60866 119 aaKnown RBP1.21□□□□□ -2.22
CPSF6-207ENST00000551516 RPL39P62891 51 aaKnown RBP1.21□□□□□ -2.22
CPSF6-207ENST00000551516 CD164Q04900 197 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 SPAG11BQ08648 103 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 FP248Q71RG6 208 aaPredicted RBP1.21□□□□□ -2.22
CPSF6-207ENST00000551516 AMN1Q8IY45 258 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 SFT2D1Q8WV19 159 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 DPH3Q96FX2 82 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 V9GYV3 84 aa1.21□□□□□ -2.22
CPSF6-207ENST00000551516 TRAV13-1A0A0B4J241 112 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 IGKV3OR2-268A0A0C4DH90 116 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 TRBV30A0A0K0K1B3 111 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 C7orf77A4D0Y5 90 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 LINC01546A6NGU7 62 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 ZNF727A8MUV8 499 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 UMAD1C9J7I0 102 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 K7ERS5 55 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 M0QXV9 152 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 NUPR1O60356 82 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 MT2AP02795 61 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 MT1FP04733 61 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 MGPP08493 103 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 TRGC1P0CF51 173 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 UBE2G1P62253 170 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 EIF5AP63241 154 aaKnown RBP1.2□□□□□ -2.22
CPSF6-207ENST00000551516 KRTAP6-3Q3LI67 103 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 KRTAP19-6Q3LI70 58 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 EIF5AL1Q6IS14 154 aaKnown RBP1.2□□□□□ -2.22
CPSF6-207ENST00000551516 FAM19A5Q7Z5A7 132 aaPredicted RBP1.2□□□□□ -2.22
CPSF6-207ENST00000551516 C1orf64Q8NEQ6 169 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 S100ZQ8WXG8 99 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 TRAPPC1Q9Y5R8 145 aa1.2□□□□□ -2.22
CPSF6-207ENST00000551516 ZNF706Q9Y5V0 76 aaPredicted RBP1.2□□□□□ -2.22
CPSF6-207ENST00000551516 BORCS7-ASMTA0A0B4J1R7 106 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 SMIM27A0A1W2PRY6 76 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 TMEM250H0YL14 139 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 NDUFA1O15239 70 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 ARPC5O15511 151 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 SSNA1O43805 119 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 NPYP01303 97 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 IFNA1P01562 189 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 DEFA1P59665 94 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 RPS29P62273 56 aaKnown RBP1.19□□□□□ -2.22
CPSF6-207ENST00000551516 MRPL51Q4U2R6 128 aaKnown RBP1.19□□□□□ -2.22
CPSF6-207ENST00000551516 AKR1C8PQ5T2L2 129 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 TEX261Q6UWH6 196 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 TMEM136Q6ZRR5 245 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 LINC00304Q8N9R0 145 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 FAM213BQ8TBF2 198 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 MRAP2Q96G30 205 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 PACRGQ96M98 296 aaPredicted RBP1.19□□□□□ -2.22
CPSF6-207ENST00000551516 SPRR4Q96PI1 79 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 C20orf78Q9BR46 151 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 XAGE1AQ9HD64 81 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms