RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 RPL24P83731 157 aaKnown RBP7.42□□□□□ -1.22
PRPF40B-213ENST00000551269 BOD1L2Q8IYS8 172 aa7.42□□□□□ -1.22
PRPF40B-213ENST00000551269 C14orf144Q96I85 54 aa7.42□□□□□ -1.22
PRPF40B-213ENST00000551269 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
PRPF40B-213ENST00000551269 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
PRPF40B-213ENST00000551269 DLEU1O43261 78 aa7.41□□□□□ -1.22
PRPF40B-213ENST00000551269 TP73-AS1Q9UF72 201 aa7.41□□□□□ -1.22
PRPF40B-213ENST00000551269 APOBP04114 4563 aaKnown RBP7.4□□□□□ -1.22
PRPF40B-213ENST00000551269 A0A1W2PNN7 141 aa7.4□□□□□ -1.22
PRPF40B-213ENST00000551269 XGP55808 180 aa7.4□□□□□ -1.22
PRPF40B-213ENST00000551269 SERTAD4-AS1Q5TG53 156 aa7.4□□□□□ -1.22
PRPF40B-213ENST00000551269 Q6ZVH6 145 aa7.4□□□□□ -1.22
PRPF40B-213ENST00000551269 C7orf33Q8WU49 177 aa7.4□□□□□ -1.22
PRPF40B-213ENST00000551269 LITAFQ99732 161 aa7.4□□□□□ -1.22
PRPF40B-213ENST00000551269 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.22
PRPF40B-213ENST00000551269 UBE2BP63146 152 aa7.39□□□□□ -1.23
PRPF40B-213ENST00000551269 SRSF9Q13242 221 aaKnown RBP eCLIP7.39□□□□□ -1.23
PRPF40B-213ENST00000551269 ADAMTSL4-AS1Q5T5F5 129 aa7.39□□□□□ -1.23
PRPF40B-213ENST00000551269 LINC00308Q8TCZ7 52 aa7.39□□□□□ -1.23
PRPF40B-213ENST00000551269 SPANXB1Q9NS25 103 aaPredicted RBP7.39□□□□□ -1.23
PRPF40B-213ENST00000551269 IFITM1P13164 125 aa7.38□□□□□ -1.23
PRPF40B-213ENST00000551269 LBHQ53QV2 105 aaPredicted RBP7.38□□□□□ -1.23
PRPF40B-213ENST00000551269 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-213ENST00000551269 MRPL55Q7Z7F7 128 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-213ENST00000551269 IGLV5-37A0A075B6J1 123 aa7.37□□□□□ -1.23
PRPF40B-213ENST00000551269 NCR3O14931 201 aa7.37□□□□□ -1.23
PRPF40B-213ENST00000551269 VPREB1P12018 145 aa7.37□□□□□ -1.23
PRPF40B-213ENST00000551269 HIST1H4GQ99525 98 aa7.37□□□□□ -1.23
PRPF40B-213ENST00000551269 UQCR10Q9UDW1 63 aa7.37□□□□□ -1.23
PRPF40B-213ENST00000551269 C22orf24Q9Y442 160 aa7.37□□□□□ -1.23
PRPF40B-213ENST00000551269 LOC107984156A0A0G2JMH3 177 aa7.36□□□□□ -1.23
PRPF40B-213ENST00000551269 SOSTDC1Q6X4U4 206 aa7.36□□□□□ -1.23
PRPF40B-213ENST00000551269 ARL17AQ8IVW1 177 aa7.36□□□□□ -1.23
PRPF40B-213ENST00000551269 LINC00528Q8N1L1 170 aa7.36□□□□□ -1.23
PRPF40B-213ENST00000551269 C12orf57Q99622 126 aa7.36□□□□□ -1.23
PRPF40B-213ENST00000551269 BIRC6Q9NR09 4857 aa7.35□□□□□ -1.23
PRPF40B-213ENST00000551269 GAGE10A6NGK3 116 aa7.35□□□□□ -1.23
PRPF40B-213ENST00000551269 EPM2AB3EWF7 344 aa7.35□□□□□ -1.23
PRPF40B-213ENST00000551269 NDUFC2O95298 119 aa7.35□□□□□ -1.23
PRPF40B-213ENST00000551269 SMR3BP02814 79 aaPredicted RBP7.35□□□□□ -1.23
PRPF40B-213ENST00000551269 HIGD1BQ9P298 99 aa7.35□□□□□ -1.23
PRPF40B-213ENST00000551269 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
PRPF40B-213ENST00000551269 M0R378 163 aa7.34□□□□□ -1.23
PRPF40B-213ENST00000551269 HNRNPA3P51991 378 aaKnown RBP7.34□□□□□ -1.23
PRPF40B-213ENST00000551269 C2orf91Q6ZV80 131 aa7.34□□□□□ -1.23
PRPF40B-213ENST00000551269 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
PRPF40B-213ENST00000551269 Q8NDZ9 215 aa7.34□□□□□ -1.23
PRPF40B-213ENST00000551269 PPDPFQ9H3Y8 114 aa7.34□□□□□ -1.23
PRPF40B-213ENST00000551269 HSPG2P98160 4391 aa7.33□□□□□ -1.24
PRPF40B-213ENST00000551269 TSTD3H0UI37 97 aa7.33□□□□□ -1.24
PRPF40B-213ENST00000551269 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-213ENST00000551269 MUSTN1Q8IVN3 82 aa7.33□□□□□ -1.24
PRPF40B-213ENST00000551269 PRO1933Q9H354 126 aa7.33□□□□□ -1.24
PRPF40B-213ENST00000551269 IGKV2-28A0A075B6P5 120 aa7.32□□□□□ -1.24
PRPF40B-213ENST00000551269 TRBV10-2A0A0K0K1G8 114 aa7.32□□□□□ -1.24
PRPF40B-213ENST00000551269 IGKV2D-28P01615 120 aa7.32□□□□□ -1.24
PRPF40B-213ENST00000551269 S100A7L2Q5SY68 101 aa7.32□□□□□ -1.24
PRPF40B-213ENST00000551269 LINC00167Q96N53 147 aa7.32□□□□□ -1.24
PRPF40B-213ENST00000551269 RPL37AP8A6NKH3 93 aa7.31□□□□□ -1.24
PRPF40B-213ENST00000551269 EIF4EBP3O60516 100 aaPredicted RBP7.31□□□□□ -1.24
PRPF40B-213ENST00000551269 PLA2G1BP04054 148 aaKnown RBP7.31□□□□□ -1.24
PRPF40B-213ENST00000551269 TAL2Q16559 108 aa7.31□□□□□ -1.24
PRPF40B-213ENST00000551269 Q5VSD8 79 aa7.31□□□□□ -1.24
PRPF40B-213ENST00000551269 LINC00518Q8N0U6 118 aa7.31□□□□□ -1.24
PRPF40B-213ENST00000551269 RYR1P21817 5038 aa7.3□□□□□ -1.24
PRPF40B-213ENST00000551269 TMEM238LA0A1B0GVL6 79 aa7.3□□□□□ -1.24
PRPF40B-213ENST00000551269 A6NJY4 79 aa7.3□□□□□ -1.24
PRPF40B-213ENST00000551269 DDTP30046 118 aa7.3□□□□□ -1.24
PRPF40B-213ENST00000551269 PRR3P79522 188 aaKnown RBP7.3□□□□□ -1.24
PRPF40B-213ENST00000551269 HSD52Q0P140 79 aa7.3□□□□□ -1.24
PRPF40B-213ENST00000551269 OR13C6PQ8NH95 151 aa7.3□□□□□ -1.24
PRPF40B-213ENST00000551269 CBY1Q9Y3M2 126 aa7.3□□□□□ -1.24
PRPF40B-213ENST00000551269 TRBV10-3A0A0K0K1G6 114 aa7.29□□□□□ -1.24
PRPF40B-213ENST00000551269 Q8N1X5 172 aa7.29□□□□□ -1.24
PRPF40B-213ENST00000551269 PSORS1C2Q9UIG4 136 aa7.29□□□□□ -1.24
PRPF40B-213ENST00000551269 IGLV1-50A0A075B6I6 118 aa7.28□□□□□ -1.24
PRPF40B-213ENST00000551269 A4D1N5 150 aa7.28□□□□□ -1.24
PRPF40B-213ENST00000551269 PRYO14603 147 aa7.28□□□□□ -1.24
PRPF40B-213ENST00000551269 C1orf137Q5JT78 98 aa7.28□□□□□ -1.24
PRPF40B-213ENST00000551269 CEND1Q8N111 149 aa7.28□□□□□ -1.24
PRPF40B-213ENST00000551269 KIAA1109Q2LD37 5005 aa7.28□□□□□ -1.24
PRPF40B-213ENST00000551269 TRAV23DV6A0A075B6W5 121 aa7.27□□□□□ -1.25
PRPF40B-213ENST00000551269 TRAV13-2A0A0B4J235 113 aa7.27□□□□□ -1.25
PRPF40B-213ENST00000551269 A6NDN8 102 aa7.27□□□□□ -1.25
PRPF40B-213ENST00000551269 REG3GQ6UW15 175 aa7.27□□□□□ -1.25
PRPF40B-213ENST00000551269 TMEM126AQ9H061 195 aa7.27□□□□□ -1.25
PRPF40B-213ENST00000551269 VPS13BQ7Z7G8 4022 aa7.26□□□□□ -1.25
PRPF40B-213ENST00000551269 LINC00337Q8N6G1 96 aa7.26□□□□□ -1.25
PRPF40B-213ENST00000551269 IGLV6-57P01721 117 aa7.25□□□□□ -1.25
PRPF40B-213ENST00000551269 KRTAP11-1Q8IUC1 163 aa7.25□□□□□ -1.25
PRPF40B-213ENST00000551269 RAB37Q96AX2 223 aa7.25□□□□□ -1.25
PRPF40B-213ENST00000551269 ETDCA0A1B0GVM5 59 aa7.24□□□□□ -1.25
PRPF40B-213ENST00000551269 BCE1O60756 84 aa7.24□□□□□ -1.25
PRPF40B-213ENST00000551269 UBE2AP49459 152 aa7.24□□□□□ -1.25
PRPF40B-213ENST00000551269 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
PRPF40B-213ENST00000551269 M0R143 59 aa7.23□□□□□ -1.25
PRPF40B-213ENST00000551269 RPL13AP40429 203 aaKnown RBP7.23□□□□□ -1.25
PRPF40B-213ENST00000551269 FXYD2P54710 66 aa7.23□□□□□ -1.25
PRPF40B-213ENST00000551269 FAM19A1Q7Z5A9 133 aa7.23□□□□□ -1.25
PRPF40B-213ENST00000551269 KCNQ1DNQ9H478 68 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms