RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 VPREB1P12018 145 aa4.58□□□□□ -1.68
ERBB3-218ENST00000551176 FABP4P15090 132 aa4.58□□□□□ -1.68
ERBB3-218ENST00000551176 TSPEAR-AS2P59090 65 aa4.58□□□□□ -1.68
ERBB3-218ENST00000551176 PRR26Q8N8Z3 221 aa4.58□□□□□ -1.68
ERBB3-218ENST00000551176 PMCHL2Q9BQD1 86 aa4.58□□□□□ -1.68
ERBB3-218ENST00000551176 ZNF861PO60384 105 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 BCE1O60756 84 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST1H2BKO60814 126 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST1H2BJP06899 126 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST1H2BOP23527 126 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST1H2BBP33778 126 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST1H2BDP58876 126 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST1H2BCP62807 126 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 COX17Q14061 63 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST2H2BEQ16778 126 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST1H2BHQ93079 126 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST1H2BNQ99877 126 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 HIST1H2BMQ99879 126 aa4.57□□□□□ -1.68
ERBB3-218ENST00000551176 IGKV2-28A0A075B6P5 120 aa4.56□□□□□ -1.68
ERBB3-218ENST00000551176 A0A0U1RRA0 63 aa4.56□□□□□ -1.68
ERBB3-218ENST00000551176 IGKV2D-28P01615 120 aa4.56□□□□□ -1.68
ERBB3-218ENST00000551176 SMIM13P0DJ93 91 aa4.56□□□□□ -1.68
ERBB3-218ENST00000551176 LINC00158P58513 81 aa4.56□□□□□ -1.68
ERBB3-218ENST00000551176 SFTA2Q6UW10 78 aa4.56□□□□□ -1.68
ERBB3-218ENST00000551176 KRTAP13-1Q8IUC0 172 aa4.56□□□□□ -1.68
ERBB3-218ENST00000551176 NKAPP1Q8N9T2 125 aa4.56□□□□□ -1.68
ERBB3-218ENST00000551176 HSPB8Q9UJY1 196 aa4.56□□□□□ -1.68
ERBB3-218ENST00000551176 IGLV1-50A0A075B6I6 118 aa4.55□□□□□ -1.68
ERBB3-218ENST00000551176 TMEM238C9JI98 176 aa4.55□□□□□ -1.68
ERBB3-218ENST00000551176 PLNP26678 52 aa4.55□□□□□ -1.68
ERBB3-218ENST00000551176 LEPROTO15243 131 aa4.54□□□□□ -1.68
ERBB3-218ENST00000551176 DPM2O94777 84 aa4.54□□□□□ -1.68
ERBB3-218ENST00000551176 NDUFA12Q9UI09 145 aa4.54□□□□□ -1.68
ERBB3-218ENST00000551176 M0R378 163 aa4.53□□□□□ -1.68
ERBB3-218ENST00000551176 IGKCP01834 107 aa4.53□□□□□ -1.68
ERBB3-218ENST00000551176 RPL28P46779 137 aaKnown RBP4.53□□□□□ -1.68
ERBB3-218ENST00000551176 HERV-K104P63124 156 aa4.53□□□□□ -1.68
ERBB3-218ENST00000551176 RPL24P83731 157 aaKnown RBP4.53□□□□□ -1.68
ERBB3-218ENST00000551176 MIR7-3HGQ8N6C7 128 aa4.53□□□□□ -1.68
ERBB3-218ENST00000551176 MAP1LC3CQ9BXW4 147 aa4.53□□□□□ -1.68
ERBB3-218ENST00000551176 TMEM126AQ9H061 195 aa4.53□□□□□ -1.68
ERBB3-218ENST00000551176 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.68
ERBB3-218ENST00000551176 LRP2P98164 4655 aa4.52□□□□□ -1.69
ERBB3-218ENST00000551176 A0A087X002 238 aa4.52□□□□□ -1.69
ERBB3-218ENST00000551176 MYMXA0A1B0GTQ4 84 aa4.52□□□□□ -1.69
ERBB3-218ENST00000551176 SYS1-DBNDD2H3BUS1 97 aa4.52□□□□□ -1.69
ERBB3-218ENST00000551176 J3QQQ9 107 aa4.52□□□□□ -1.69
ERBB3-218ENST00000551176 PRLHP81277 87 aa4.52□□□□□ -1.69
ERBB3-218ENST00000551176 MEIG1Q5JSS6 88 aa4.52□□□□□ -1.69
ERBB3-218ENST00000551176 DAND5Q8N907 189 aa4.52□□□□□ -1.69
ERBB3-218ENST00000551176 PLEKHB2Q96CS7 222 aa4.52□□□□□ -1.69
ERBB3-218ENST00000551176 NCR3O14931 201 aa4.51□□□□□ -1.69
ERBB3-218ENST00000551176 UBE2AP49459 152 aa4.51□□□□□ -1.69
ERBB3-218ENST00000551176 COA6Q5JTJ3 125 aaKnown RBP4.51□□□□□ -1.69
ERBB3-218ENST00000551176 BOD1L2Q8IYS8 172 aa4.51□□□□□ -1.69
ERBB3-218ENST00000551176 E9PLD3 99 aa4.5□□□□□ -1.69
ERBB3-218ENST00000551176 HERVK_113P61574 105 aa4.5□□□□□ -1.69
ERBB3-218ENST00000551176 ADAMTSL4-AS1Q5T5F5 129 aa4.5□□□□□ -1.69
ERBB3-218ENST00000551176 LINC01545Q5VT33 79 aa4.5□□□□□ -1.69
ERBB3-218ENST00000551176 FAM19A1Q7Z5A9 133 aa4.5□□□□□ -1.69
ERBB3-218ENST00000551176 LOC107984156A0A0G2JMH3 177 aa4.49□□□□□ -1.69
ERBB3-218ENST00000551176 ATP6V1G1O75348 118 aa4.49□□□□□ -1.69
ERBB3-218ENST00000551176 C3orf79P0CE67 100 aa4.49□□□□□ -1.69
ERBB3-218ENST00000551176 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
ERBB3-218ENST00000551176 RPL13AP40429 203 aaKnown RBP4.49□□□□□ -1.69
ERBB3-218ENST00000551176 NMUP48645 174 aa4.49□□□□□ -1.69
ERBB3-218ENST00000551176 KRTAP13-2Q52LG2 175 aa4.49□□□□□ -1.69
ERBB3-218ENST00000551176 SOSTDC1Q6X4U4 206 aa4.49□□□□□ -1.69
ERBB3-218ENST00000551176 ARL17AQ8IVW1 177 aa4.49□□□□□ -1.69
ERBB3-218ENST00000551176 IGKV2D-26A0A0A0MRZ7 120 aa4.48□□□□□ -1.69
ERBB3-218ENST00000551176 A0A0J9YXY3 114 aa4.48□□□□□ -1.69
ERBB3-218ENST00000551176 TRBV10-3A0A0K0K1G6 114 aa4.48□□□□□ -1.69
ERBB3-218ENST00000551176 LINC00587B1AMM8 73 aa4.48□□□□□ -1.69
ERBB3-218ENST00000551176 KRTAP4-16G5E9R7 235 aaPredicted RBP4.48□□□□□ -1.69
ERBB3-218ENST00000551176 SPRR1AP35321 89 aa4.48□□□□□ -1.69
ERBB3-218ENST00000551176 PET117Q6UWS5 81 aa4.48□□□□□ -1.69
ERBB3-218ENST00000551176 LITAFQ99732 161 aa4.48□□□□□ -1.69
ERBB3-218ENST00000551176 TTTY13Q9BZ97 58 aa4.48□□□□□ -1.69
ERBB3-218ENST00000551176 KCNQ1DNQ9H478 68 aa4.48□□□□□ -1.69
ERBB3-218ENST00000551176 LPAP08519 4548 aa4.48□□□□□ -1.69
ERBB3-218ENST00000551176 RNF213Q63HN8 5207 aa4.47□□□□□ -1.69
ERBB3-218ENST00000551176 CRYGAP11844 174 aa4.47□□□□□ -1.69
ERBB3-218ENST00000551176 KRTDAPP60985 99 aa4.47□□□□□ -1.69
ERBB3-218ENST00000551176 PRYO14603 147 aa4.46□□□□□ -1.7
ERBB3-218ENST00000551176 NPC2P61916 151 aa4.46□□□□□ -1.7
ERBB3-218ENST00000551176 TYMSOSQ8TAI1 123 aa4.46□□□□□ -1.7
ERBB3-218ENST00000551176 HIGD2AQ9BW72 106 aa4.46□□□□□ -1.7
ERBB3-218ENST00000551176 TRBV10-2A0A0K0K1G8 114 aa4.45□□□□□ -1.7
ERBB3-218ENST00000551176 TSPAN13O95857 204 aa4.45□□□□□ -1.7
ERBB3-218ENST00000551176 FAM229BQ4G0N7 80 aa4.45□□□□□ -1.7
ERBB3-218ENST00000551176 LINC00337Q8N6G1 96 aa4.45□□□□□ -1.7
ERBB3-218ENST00000551176 SPANXB1Q9NS25 103 aaPredicted RBP4.45□□□□□ -1.7
ERBB3-218ENST00000551176 B5MCH6 92 aa4.44□□□□□ -1.7
ERBB3-218ENST00000551176 NDUFC2O95298 119 aa4.44□□□□□ -1.7
ERBB3-218ENST00000551176 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
ERBB3-218ENST00000551176 DDTP30046 118 aa4.44□□□□□ -1.7
ERBB3-218ENST00000551176 ANKRD39Q53RE8 183 aa4.44□□□□□ -1.7
ERBB3-218ENST00000551176 ATOH7Q8N100 152 aa4.44□□□□□ -1.7
ERBB3-218ENST00000551176 C3orf22Q8N5N4 141 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms