RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 CBLN2Q8IUK8 224 aa7.38□□□□□ -1.23
PTCH1-221ENST00000550914 CLLU1Q5K131 121 aa7.37□□□□□ -1.23
PTCH1-221ENST00000550914 UQCC3Q6UW78 93 aa7.37□□□□□ -1.23
PTCH1-221ENST00000550914 PPDPFQ9H3Y8 114 aa7.37□□□□□ -1.23
PTCH1-221ENST00000550914 FP248Q71RG6 208 aaPredicted RBP7.36□□□□□ -1.23
PTCH1-221ENST00000550914 C3orf22Q8N5N4 141 aa7.36□□□□□ -1.23
PTCH1-221ENST00000550914 TMEM218A2RU14 115 aa7.35□□□□□ -1.23
PTCH1-221ENST00000550914 FABP9Q0Z7S8 132 aa7.35□□□□□ -1.23
PTCH1-221ENST00000550914 Q8NDZ9 215 aa7.35□□□□□ -1.23
PTCH1-221ENST00000550914 A0A096LNJ9 63 aa7.34□□□□□ -1.23
PTCH1-221ENST00000550914 NDUFA6P56556 154 aa7.34□□□□□ -1.23
PTCH1-221ENST00000550914 ZNF625Q96I27 306 aaPredicted RBP7.34□□□□□ -1.23
PTCH1-221ENST00000550914 SPRR4Q96PI1 79 aa7.34□□□□□ -1.23
PTCH1-221ENST00000550914 HIGD2AQ9BW72 106 aa7.34□□□□□ -1.23
PTCH1-221ENST00000550914 ZNF706Q9Y5V0 76 aaPredicted RBP7.34□□□□□ -1.23
PTCH1-221ENST00000550914 KRTAP9-6A0A140TA67 174 aa7.33□□□□□ -1.24
PTCH1-221ENST00000550914 SEC11CQ9BY50 192 aa7.33□□□□□ -1.24
PTCH1-221ENST00000550914 HBDP02042 147 aa7.32□□□□□ -1.24
PTCH1-221ENST00000550914 C11orf86A6NJI1 115 aa7.31□□□□□ -1.24
PTCH1-221ENST00000550914 LINC00614P0C842 121 aa7.31□□□□□ -1.24
PTCH1-221ENST00000550914 PRYO14603 147 aa7.3□□□□□ -1.24
PTCH1-221ENST00000550914 LINC00158P58513 81 aa7.3□□□□□ -1.24
PTCH1-221ENST00000550914 TMEM170BQ5T4T1 132 aa7.3□□□□□ -1.24
PTCH1-221ENST00000550914 URB1-AS1Q96HZ7 61 aa7.3□□□□□ -1.24
PTCH1-221ENST00000550914 KRTAP13-3Q3SY46 172 aa7.29□□□□□ -1.24
PTCH1-221ENST00000550914 BAGE3Q86Y29 109 aa7.29□□□□□ -1.24
PTCH1-221ENST00000550914 LINC00337Q8N6G1 96 aa7.29□□□□□ -1.24
PTCH1-221ENST00000550914 C18orf32Q8TCD1 76 aa7.29□□□□□ -1.24
PTCH1-221ENST00000550914 SPINK1P00995 79 aa7.28□□□□□ -1.24
PTCH1-221ENST00000550914 SPRR1AP35321 89 aa7.28□□□□□ -1.24
PTCH1-221ENST00000550914 RHEBQ15382 184 aa7.28□□□□□ -1.24
PTCH1-221ENST00000550914 ASB16-AS1Q495Z4 193 aa7.28□□□□□ -1.24
PTCH1-221ENST00000550914 Q8NBF4 154 aa7.28□□□□□ -1.24
PTCH1-221ENST00000550914 KCNQ1DNQ9H478 68 aa7.27□□□□□ -1.25
PTCH1-221ENST00000550914 PMCHL1Q16048 86 aa7.26□□□□□ -1.25
PTCH1-221ENST00000550914 C10orf91Q5T1B1 145 aa7.26□□□□□ -1.25
PTCH1-221ENST00000550914 CHTOPQ9Y3Y2 248 aaKnown RBP7.26□□□□□ -1.25
PTCH1-221ENST00000550914 TMEM223A0PJW6 202 aa7.25□□□□□ -1.25
PTCH1-221ENST00000550914 KRTAP4-16G5E9R7 235 aaPredicted RBP7.25□□□□□ -1.25
PTCH1-221ENST00000550914 ATP6V1G1O75348 118 aa7.25□□□□□ -1.25
PTCH1-221ENST00000550914 LINC00483Q53H64 154 aa7.25□□□□□ -1.25
PTCH1-221ENST00000550914 BOD1L2Q8IYS8 172 aa7.25□□□□□ -1.25
PTCH1-221ENST00000550914 DAND5Q8N907 189 aa7.25□□□□□ -1.25
PTCH1-221ENST00000550914 TRAPPC1Q9Y5R8 145 aa7.25□□□□□ -1.25
PTCH1-221ENST00000550914 TRAV12-1A0A0B4J245 112 aa7.24□□□□□ -1.25
PTCH1-221ENST00000550914 A0A0U1RRA0 63 aa7.24□□□□□ -1.25
PTCH1-221ENST00000550914 ETDCA0A1B0GVM5 59 aa7.24□□□□□ -1.25
PTCH1-221ENST00000550914 GHRHP01286 108 aa7.24□□□□□ -1.25
PTCH1-221ENST00000550914 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
PTCH1-221ENST00000550914 SMCR5Q8TEV8 140 aa7.24□□□□□ -1.25
PTCH1-221ENST00000550914 RPS10P5Q9NQ39 176 aa7.24□□□□□ -1.25
PTCH1-221ENST00000550914 LINC00587B1AMM8 73 aa7.23□□□□□ -1.25
PTCH1-221ENST00000550914 SMIM13P0DJ93 91 aa7.23□□□□□ -1.25
PTCH1-221ENST00000550914 LINC01547P58512 204 aaPredicted RBP7.23□□□□□ -1.25
PTCH1-221ENST00000550914 SEC61BP60468 96 aaKnown RBP7.23□□□□□ -1.25
PTCH1-221ENST00000550914 HERV-K104P63124 156 aa7.23□□□□□ -1.25
PTCH1-221ENST00000550914 FAM19A2Q8N3H0 131 aa7.23□□□□□ -1.25
PTCH1-221ENST00000550914 NDUFA12Q9UI09 145 aa7.23□□□□□ -1.25
PTCH1-221ENST00000550914 S100A12P80511 92 aa7.22□□□□□ -1.25
PTCH1-221ENST00000550914 MIR7-3HGQ8N6C7 128 aa7.22□□□□□ -1.25
PTCH1-221ENST00000550914 TRBV10-3A0A0K0K1G6 114 aa7.21□□□□□ -1.26
PTCH1-221ENST00000550914 NCR3O14931 201 aa7.21□□□□□ -1.26
PTCH1-221ENST00000550914 IFITM2Q01629 132 aa7.21□□□□□ -1.26
PTCH1-221ENST00000550914 MEIG1Q5JSS6 88 aa7.21□□□□□ -1.26
PTCH1-221ENST00000550914 SSBP3-AS1Q7Z2R9 100 aa7.21□□□□□ -1.26
PTCH1-221ENST00000550914 COMMD7Q86VX2 200 aa7.2□□□□□ -1.26
PTCH1-221ENST00000550914 IFI27L1Q96BM0 104 aa7.2□□□□□ -1.26
PTCH1-221ENST00000550914 MAP1LC3CQ9BXW4 147 aa7.2□□□□□ -1.26
PTCH1-221ENST00000550914 B5MCH6 92 aa7.19□□□□□ -1.26
PTCH1-221ENST00000550914 GAGE2AQ6NT46 116 aa7.19□□□□□ -1.26
PTCH1-221ENST00000550914 Q8N377 158 aa7.19□□□□□ -1.26
PTCH1-221ENST00000550914 CHCHD1Q96BP2 118 aaKnown RBP7.19□□□□□ -1.26
PTCH1-221ENST00000550914 LOC107984156A0A0G2JMH3 177 aa7.18□□□□□ -1.26
PTCH1-221ENST00000550914 MYMXA0A1B0GTQ4 84 aa7.18□□□□□ -1.26
PTCH1-221ENST00000550914 SLC25A20O43772 301 aa7.18□□□□□ -1.26
PTCH1-221ENST00000550914 MOBPQ13875 183 aa7.18□□□□□ -1.26
PTCH1-221ENST00000550914 ARL17AQ8IVW1 177 aa7.18□□□□□ -1.26
PTCH1-221ENST00000550914 KRTAP4-1Q9BYQ7 146 aa7.18□□□□□ -1.26
PTCH1-221ENST00000550914 TRBV10-2A0A0K0K1G8 114 aa7.17□□□□□ -1.26
PTCH1-221ENST00000550914 IGLV9-49A0A0B4J1Y8 123 aa7.16□□□□□ -1.26
PTCH1-221ENST00000550914 ERC2-IT1O76042 136 aa7.15□□□□□ -1.26
PTCH1-221ENST00000550914 DDTP30046 118 aa7.15□□□□□ -1.26
PTCH1-221ENST00000550914 XP32Q5T750 250 aa7.15□□□□□ -1.26
PTCH1-221ENST00000550914 Q6ZRX8 168 aa7.15□□□□□ -1.26
PTCH1-221ENST00000550914 Q9BRP9 147 aa7.15□□□□□ -1.26
PTCH1-221ENST00000550914 JOSD1Q15040 202 aaPredicted RBP7.13□□□□□ -1.27
PTCH1-221ENST00000550914 SPANXB1Q9NS25 103 aaPredicted RBP7.13□□□□□ -1.27
PTCH1-221ENST00000550914 SNAPINO95295 136 aa7.12□□□□□ -1.27
PTCH1-221ENST00000550914 C5orf52A6NGY3 159 aa7.11□□□□□ -1.27
PTCH1-221ENST00000550914 LEPROTO15243 131 aa7.11□□□□□ -1.27
PTCH1-221ENST00000550914 NDUFC2O95298 119 aa7.11□□□□□ -1.27
PTCH1-221ENST00000550914 IGLV6-57P01721 117 aa7.11□□□□□ -1.27
PTCH1-221ENST00000550914 APOC3P02656 99 aa7.11□□□□□ -1.27
PTCH1-221ENST00000550914 TSPEAR-AS2P59090 65 aa7.11□□□□□ -1.27
PTCH1-221ENST00000550914 SVBPQ8N300 66 aa7.11□□□□□ -1.27
PTCH1-221ENST00000550914 MIEN1Q9BRT3 115 aa7.11□□□□□ -1.27
PTCH1-221ENST00000550914 HSBP1O75506 76 aa7.1□□□□□ -1.27
PTCH1-221ENST00000550914 PLNP26678 52 aa7.1□□□□□ -1.27
PTCH1-221ENST00000550914 NMUP48645 174 aa7.1□□□□□ -1.27
PTCH1-221ENST00000550914 J3QQQ9 107 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms