RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CDKN2A-AS1Q9UH64 79 aa2.88□□□□□ -1.95
SCAF11-214ENST00000550893 LAMTOR2Q9Y2Q5 125 aa2.88□□□□□ -1.95
SCAF11-214ENST00000550893 TGIF2-C20orf24A0A0A6YYL0 155 aa2.87□□□□□ -1.95
SCAF11-214ENST00000550893 F8W036 122 aa2.87□□□□□ -1.95
SCAF11-214ENST00000550893 KRTAP13-1Q8IUC0 172 aa2.87□□□□□ -1.95
SCAF11-214ENST00000550893 C18orf32Q8TCD1 76 aa2.87□□□□□ -1.95
SCAF11-214ENST00000550893 LINC00167Q96N53 147 aa2.87□□□□□ -1.95
SCAF11-214ENST00000550893 CAMK2N2Q96S95 79 aa2.87□□□□□ -1.95
SCAF11-214ENST00000550893 TIMM17AQ99595 171 aa2.87□□□□□ -1.95
SCAF11-214ENST00000550893 MAP1LC3AQ9H492 121 aa2.87□□□□□ -1.95
SCAF11-214ENST00000550893 TRAV9-1A0A075B6T8 112 aa2.86□□□□□ -1.95
SCAF11-214ENST00000550893 MT-ND4LP03901 98 aa2.86□□□□□ -1.95
SCAF11-214ENST00000550893 S100A8P05109 93 aa2.86□□□□□ -1.95
SCAF11-214ENST00000550893 RPL18AQ02543 176 aaKnown RBP2.86□□□□□ -1.95
SCAF11-214ENST00000550893 PDZD11Q5EBL8 140 aa2.86□□□□□ -1.95
SCAF11-214ENST00000550893 LINC01561Q8N1V8 128 aa2.86□□□□□ -1.95
SCAF11-214ENST00000550893 GNB1LQ9BYB4 327 aa2.86□□□□□ -1.95
SCAF11-214ENST00000550893 CYSLTR1Q9Y271 337 aa2.86□□□□□ -1.95
SCAF11-214ENST00000550893 FAT4Q6V0I7 4981 aa2.85□□□□□ -1.95
SCAF11-214ENST00000550893 NDUFA1O15239 70 aa2.85□□□□□ -1.95
SCAF11-214ENST00000550893 SCO1O75880 301 aa2.85□□□□□ -1.95
SCAF11-214ENST00000550893 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
SCAF11-214ENST00000550893 ZNF22P17026 224 aaPredicted RBP2.85□□□□□ -1.95
SCAF11-214ENST00000550893 PMCHL1Q16048 86 aa2.85□□□□□ -1.95
SCAF11-214ENST00000550893 SPINK6Q6UWN8 80 aa2.85□□□□□ -1.95
SCAF11-214ENST00000550893 FAM19A5Q7Z5A7 132 aaPredicted RBP2.85□□□□□ -1.95
SCAF11-214ENST00000550893 Q8IZM0 81 aa2.85□□□□□ -1.95
SCAF11-214ENST00000550893 NXT2Q9NPJ8 142 aaKnown RBP2.85□□□□□ -1.95
SCAF11-214ENST00000550893 TRBV30A0A0K0K1B3 111 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 C11orf86A6NJI1 115 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 NDUFC2-KCTD14E9PQ53 114 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 F8WDY8 70 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 K7EMI3 77 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 IGLC3P0DOY3 106 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 ORMDL2Q53FV1 153 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 TEX43Q6ZNM6 134 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 ERASQ7Z444 233 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 LINC00469Q8N7U9 141 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 C7orf33Q8WU49 177 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 CST9LQ9H4G1 147 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 XAGE1AQ9HD64 81 aa2.84□□□□□ -1.95
SCAF11-214ENST00000550893 TINCRA0A1B0GVN0 87 aa2.83□□□□□ -1.96
SCAF11-214ENST00000550893 H0Y9J4 135 aa2.83□□□□□ -1.96
SCAF11-214ENST00000550893 M0QXV9 152 aa2.83□□□□□ -1.96
SCAF11-214ENST00000550893 SPINK8P0C7L1 97 aa2.83□□□□□ -1.96
SCAF11-214ENST00000550893 TSPEAR-AS2P59090 65 aa2.83□□□□□ -1.96
SCAF11-214ENST00000550893 RHEBQ15382 184 aa2.83□□□□□ -1.96
SCAF11-214ENST00000550893 KRTAP13-2Q52LG2 175 aa2.83□□□□□ -1.96
SCAF11-214ENST00000550893 CBLN2Q8IUK8 224 aa2.83□□□□□ -1.96
SCAF11-214ENST00000550893 ZNF625Q96I27 306 aaPredicted RBP2.83□□□□□ -1.96
SCAF11-214ENST00000550893 LINC00474Q9P2X8 69 aa2.83□□□□□ -1.96
SCAF11-214ENST00000550893 NUPR1O60356 82 aa2.82□□□□□ -1.96
SCAF11-214ENST00000550893 RAB5AP20339 215 aa2.82□□□□□ -1.96
SCAF11-214ENST00000550893 RAB14P61106 215 aa2.82□□□□□ -1.96
SCAF11-214ENST00000550893 C1orf137Q5JT78 98 aa2.82□□□□□ -1.96
SCAF11-214ENST00000550893 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
SCAF11-214ENST00000550893 C22orf24Q9Y442 160 aa2.82□□□□□ -1.96
SCAF11-214ENST00000550893 F8VRH5 84 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 MT-ND6P03923 174 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 HERVK_113P63121 156 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 SMAGPQ0VAQ4 97 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 FABP9Q0Z7S8 132 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 PMVKQ15126 192 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 Q6ZN92 141 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 COX7B2Q8TF08 81 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 SCGB3A1Q96QR1 104 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 VCX2Q9H322 139 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 TP73-AS1Q9UF72 201 aa2.81□□□□□ -1.96
SCAF11-214ENST00000550893 KRTAP4-16G5E9R7 235 aaPredicted RBP2.8□□□□□ -1.96
SCAF11-214ENST00000550893 APOC3P02656 99 aa2.8□□□□□ -1.96
SCAF11-214ENST00000550893 SLC7A5P1Q8MH63 180 aa2.8□□□□□ -1.96
SCAF11-214ENST00000550893 C2orf88Q9BSF0 95 aa2.8□□□□□ -1.96
SCAF11-214ENST00000550893 TOMM7Q9P0U1 55 aa2.8□□□□□ -1.96
SCAF11-214ENST00000550893 TMEM223A0PJW6 202 aa2.79□□□□□ -1.96
SCAF11-214ENST00000550893 COLCA2A8K830 154 aa2.79□□□□□ -1.96
SCAF11-214ENST00000550893 HBDP02042 147 aa2.79□□□□□ -1.96
SCAF11-214ENST00000550893 LINC00614P0C842 121 aa2.79□□□□□ -1.96
SCAF11-214ENST00000550893 MRPL55Q7Z7F7 128 aaKnown RBP2.79□□□□□ -1.96
SCAF11-214ENST00000550893 SND1-IT1Q9HBX3 110 aa2.79□□□□□ -1.96
SCAF11-214ENST00000550893 PKIGQ9Y2B9 76 aa2.79□□□□□ -1.96
SCAF11-214ENST00000550893 TMEM238C9JI98 176 aa2.78□□□□□ -1.96
SCAF11-214ENST00000550893 M0R378 163 aa2.78□□□□□ -1.96
SCAF11-214ENST00000550893 ZNF861PO60384 105 aa2.78□□□□□ -1.96
SCAF11-214ENST00000550893 CXCL5P42830 114 aa2.78□□□□□ -1.96
SCAF11-214ENST00000550893 COX19Q49B96 90 aa2.78□□□□□ -1.96
SCAF11-214ENST00000550893 PET117Q6UWS5 81 aa2.78□□□□□ -1.96
SCAF11-214ENST00000550893 FA2HQ7L5A8 372 aa2.78□□□□□ -1.96
SCAF11-214ENST00000550893 FAM19A2Q8N3H0 131 aa2.78□□□□□ -1.96
SCAF11-214ENST00000550893 DPH3Q96FX2 82 aa2.78□□□□□ -1.96
SCAF11-214ENST00000550893 PACRGQ96M98 296 aaPredicted RBP2.78□□□□□ -1.96
SCAF11-214ENST00000550893 TRAPPC1Q9Y5R8 145 aa2.78□□□□□ -1.96
SCAF11-214ENST00000550893 IGLV1-50A0A075B6I6 118 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 TRAV12-1A0A0B4J245 112 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 BCE1O60756 84 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 SERF1AO75920 110 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 TRGC2P03986 189 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 S100PP25815 95 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 SPRR1AP35321 89 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 C6orf226Q5I0X4 101 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 SOSTDC1Q6X4U4 206 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms