RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 PTPN13Q12923 2485 aa10.14□□□□□ -0.79
PDE1B-207ENST00000550620 FAM208BQ5VWN6 2430 aa10.14□□□□□ -0.79
PDE1B-207ENST00000550620 KLKP1Q107X0 134 aa10.14□□□□□ -0.79
PDE1B-207ENST00000550620 TLN2Q9Y4G6 2542 aa10.13□□□□□ -0.79
PDE1B-207ENST00000550620 EPG5Q9HCE0 2579 aa10.13□□□□□ -0.79
PDE1B-207ENST00000550620 APOC4P55056 127 aa10.13□□□□□ -0.79
PDE1B-207ENST00000550620 DEFB135Q30KP9 77 aa10.13□□□□□ -0.79
PDE1B-207ENST00000550620 PRR34Q9NV39 138 aa10.13□□□□□ -0.79
PDE1B-207ENST00000550620 SETXQ7Z333 2677 aaKnown RBP10.13□□□□□ -0.79
PDE1B-207ENST00000550620 DEFB4AO15263 64 aa10.12□□□□□ -0.79
PDE1B-207ENST00000550620 COX7BP24311 80 aa10.12□□□□□ -0.79
PDE1B-207ENST00000550620 Q5XG85 94 aa10.12□□□□□ -0.79
PDE1B-207ENST00000550620 TRBV7-4A0A0J9YYF1 115 aa10.12□□□□□ -0.79
PDE1B-207ENST00000550620 H7BZZ5 65 aa10.12□□□□□ -0.79
PDE1B-207ENST00000550620 ZNF73O43830 326 aaPredicted RBP10.12□□□□□ -0.79
PDE1B-207ENST00000550620 SPATA3Q8NHX4 192 aa10.12□□□□□ -0.79
PDE1B-207ENST00000550620 SERP1Q9Y6X1 66 aa10.12□□□□□ -0.79
PDE1B-207ENST00000550620 TRBV7-6A0A0J9YX20 115 aa10.11□□□□□ -0.79
PDE1B-207ENST00000550620 KLK12Q9UKR0 248 aa10.11□□□□□ -0.79
PDE1B-207ENST00000550620 JMJD1CQ15652 2540 aa10.11□□□□□ -0.79
PDE1B-207ENST00000550620 TRAV10A0A0B4J240 114 aa10.1□□□□□ -0.79
PDE1B-207ENST00000550620 WIPF1O43516 503 aa10.1□□□□□ -0.79
PDE1B-207ENST00000550620 ELOF1P60002 83 aaKnown RBP10.1□□□□□ -0.79
PDE1B-207ENST00000550620 C6orf48Q9UBA6 75 aa10.1□□□□□ -0.79
PDE1B-207ENST00000550620 C4orf26Q17RF5 130 aa10.09□□□□□ -0.79
PDE1B-207ENST00000550620 MIFP14174 115 aa10.09□□□□□ -0.79
PDE1B-207ENST00000550620 KRTAP10-3P60369 221 aa10.08□□□□□ -0.8
PDE1B-207ENST00000550620 XAGE1AQ9HD64 81 aa10.08□□□□□ -0.8
PDE1B-207ENST00000550620 ZNF469Q96JG9 3925 aaPredicted RBP10.08□□□□□ -0.8
PDE1B-207ENST00000550620 SPART-AS1P0CW21 52 aa10.08□□□□□ -0.8
PDE1B-207ENST00000550620 EPM2AB3EWF7 344 aa10.07□□□□□ -0.8
PDE1B-207ENST00000550620 CELA1Q9UNI1 258 aa10.07□□□□□ -0.8
PDE1B-207ENST00000550620 ZNF462Q96JM2 2506 aa10.07□□□□□ -0.8
PDE1B-207ENST00000550620 NDUFC1O43677 76 aa10.07□□□□□ -0.8
PDE1B-207ENST00000550620 HTN3P15516 51 aa10.07□□□□□ -0.8
PDE1B-207ENST00000550620 HRCT1Q6UXD1 115 aa10.07□□□□□ -0.8
PDE1B-207ENST00000550620 LRRK2Q5S007 2527 aa10.06□□□□□ -0.8
PDE1B-207ENST00000550620 Q8NAQ8 132 aa10.06□□□□□ -0.8
PDE1B-207ENST00000550620 ABCA12Q86UK0 2595 aa10.05□□□□□ -0.8
PDE1B-207ENST00000550620 SONP18583 2426 aaKnown RBP10.05□□□□□ -0.8
PDE1B-207ENST00000550620 UBR5O95071 2799 aaPredicted RBP10.05□□□□□ -0.8
PDE1B-207ENST00000550620 M0R378 163 aa10.04□□□□□ -0.8
PDE1B-207ENST00000550620 SNURFQ9Y675 71 aa10.04□□□□□ -0.8
PDE1B-207ENST00000550620 CUBNO60494 3623 aa10.04□□□□□ -0.8
PDE1B-207ENST00000550620 VPREB1P12018 145 aa10.04□□□□□ -0.8
PDE1B-207ENST00000550620 RMI2Q96E14 147 aa10.04□□□□□ -0.8
PDE1B-207ENST00000550620 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
PDE1B-207ENST00000550620 ITPR3Q14573 2671 aa10.03□□□□□ -0.8
PDE1B-207ENST00000550620 CENPEQ02224 2701 aa10.02□□□□□ -0.8
PDE1B-207ENST00000550620 F8WEM9 126 aa10.02□□□□□ -0.8
PDE1B-207ENST00000550620 SCXQ7RTU7 201 aa10.02□□□□□ -0.8
PDE1B-207ENST00000550620 ATP5EP56381 51 aaPredicted RBP10.02□□□□□ -0.81
PDE1B-207ENST00000550620 EGFEM1PQ0D2K5 195 aa10.02□□□□□ -0.81
PDE1B-207ENST00000550620 TM2D3Q9BRN9 247 aa10.01□□□□□ -0.81
PDE1B-207ENST00000550620 NREPQ16612 68 aa9.99□□□□□ -0.81
PDE1B-207ENST00000550620 LINC00528Q8N1L1 170 aa9.99□□□□□ -0.81
PDE1B-207ENST00000550620 HIGD2BQ4VC39 106 aa9.99□□□□□ -0.81
PDE1B-207ENST00000550620 BPY2O14599 106 aa9.98□□□□□ -0.81
PDE1B-207ENST00000550620 ERC2-IT1O76042 136 aa9.98□□□□□ -0.81
PDE1B-207ENST00000550620 SMIM26A0A096LP01 95 aa9.97□□□□□ -0.81
PDE1B-207ENST00000550620 NIPBLQ6KC79 2804 aaeCLIP9.97□□□□□ -0.81
PDE1B-207ENST00000550620 FN1P02751 2386 aaKnown RBP9.96□□□□□ -0.81
PDE1B-207ENST00000550620 USP24Q9UPU5 2620 aa9.96□□□□□ -0.82
PDE1B-207ENST00000550620 Q6ZRU5 148 aa9.96□□□□□ -0.82
PDE1B-207ENST00000550620 NF1P21359 2839 aa9.96□□□□□ -0.82
PDE1B-207ENST00000550620 ANK3Q12955 4377 aaKnown RBP9.96□□□□□ -0.82
PDE1B-207ENST00000550620 APCP25054 2843 aa9.96□□□□□ -0.82
PDE1B-207ENST00000550620 TMEM254Q8TBM7 123 aa9.95□□□□□ -0.82
PDE1B-207ENST00000550620 MRAPQ8TCY5 172 aa9.94□□□□□ -0.82
PDE1B-207ENST00000550620 FLNAP21333 2647 aaKnown RBP9.93□□□□□ -0.82
PDE1B-207ENST00000550620 F8WDY8 70 aa9.92□□□□□ -0.82
PDE1B-207ENST00000550620 IGKV4-1P06312 121 aa9.92□□□□□ -0.82
PDE1B-207ENST00000550620 KRTAP26-1Q6PEX3 210 aa9.92□□□□□ -0.82
PDE1B-207ENST00000550620 WFDC10BQ8IUB3 73 aa9.92□□□□□ -0.82
PDE1B-207ENST00000550620 H3BNG1 76 aa9.92□□□□□ -0.82
PDE1B-207ENST00000550620 C15orf56Q8N910 161 aa9.92□□□□□ -0.82
PDE1B-207ENST00000550620 CCDC168Q8NDH2 2452 aa9.92□□□□□ -0.82
PDE1B-207ENST00000550620 SETD2Q9BYW2 2564 aaPredicted RBP9.92□□□□□ -0.82
PDE1B-207ENST00000550620 Q8N9L7 120 aa9.9□□□□□ -0.83
PDE1B-207ENST00000550620 KPRPQ5T749 579 aaPredicted RBP9.89□□□□□ -0.83
PDE1B-207ENST00000550620 Q6ZRP5 223 aa9.89□□□□□ -0.83
PDE1B-207ENST00000550620 ZFYVE26Q68DK2 2539 aa9.89□□□□□ -0.83
PDE1B-207ENST00000550620 NKAPP1Q8N9T2 125 aa9.88□□□□□ -0.83
PDE1B-207ENST00000550620 C1orf43Q9BWL3 253 aa9.88□□□□□ -0.83
PDE1B-207ENST00000550620 OCR1Q9BZK8 76 aa9.88□□□□□ -0.83
PDE1B-207ENST00000550620 A0A1B0GW54 56 aa9.88□□□□□ -0.83
PDE1B-207ENST00000550620 PRYO14603 147 aa9.88□□□□□ -0.83
PDE1B-207ENST00000550620 FP248Q71RG6 208 aaPredicted RBP9.88□□□□□ -0.83
PDE1B-207ENST00000550620 SMR3AQ99954 134 aa9.88□□□□□ -0.83
PDE1B-207ENST00000550620 KCNQ1DNQ9H478 68 aa9.88□□□□□ -0.83
PDE1B-207ENST00000550620 C3orf84H3BNL1 204 aa9.87□□□□□ -0.83
PDE1B-207ENST00000550620 PRO0628Q9UI54 55 aa9.87□□□□□ -0.83
PDE1B-207ENST00000550620 IGLV5-48A0A075B6I7 105 aa9.86□□□□□ -0.83
PDE1B-207ENST00000550620 A0A0U1RQV1 116 aa9.86□□□□□ -0.83
PDE1B-207ENST00000550620 GCN1Q92616 2671 aaKnown RBP9.86□□□□□ -0.83
PDE1B-207ENST00000550620 FUSP35637 526 aaKnown RBP eCLIP9.85□□□□□ -0.83
PDE1B-207ENST00000550620 SYCNQ0VAF6 134 aa9.85□□□□□ -0.83
PDE1B-207ENST00000550620 DEFB105AQ8NG35 78 aa9.85□□□□□ -0.83
PDE1B-207ENST00000550620 Q8N377 158 aa9.84□□□□□ -0.83
PDE1B-207ENST00000550620 DHRS4-AS1Q9P1J3 65 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms