RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SFTA2Q6UW10 78 aa12.42□□□□□ -0.42
SMARCC2-210ENST00000550519 PPDPFQ9H3Y8 114 aa12.42□□□□□ -0.42
SMARCC2-210ENST00000550519 HIGD2AQ9BW72 106 aa12.41□□□□□ -0.42
SMARCC2-210ENST00000550519 C11orf86A6NJI1 115 aa12.4□□□□□ -0.42
SMARCC2-210ENST00000550519 LINC00614P0C842 121 aa12.4□□□□□ -0.42
SMARCC2-210ENST00000550519 SPAG11AQ6PDA7 123 aa12.4□□□□□ -0.42
SMARCC2-210ENST00000550519 HBDP02042 147 aa12.39□□□□□ -0.43
SMARCC2-210ENST00000550519 C18orf32Q8TCD1 76 aa12.39□□□□□ -0.43
SMARCC2-210ENST00000550519 SPRR4Q96PI1 79 aa12.39□□□□□ -0.43
SMARCC2-210ENST00000550519 TMEM170BQ5T4T1 132 aa12.38□□□□□ -0.43
SMARCC2-210ENST00000550519 BAGE3Q86Y29 109 aa12.38□□□□□ -0.43
SMARCC2-210ENST00000550519 PMCHL1Q16048 86 aa12.37□□□□□ -0.43
SMARCC2-210ENST00000550519 LINC00158P58513 81 aa12.35□□□□□ -0.43
SMARCC2-210ENST00000550519 IFITM2Q01629 132 aa12.34□□□□□ -0.43
SMARCC2-210ENST00000550519 FP248Q71RG6 208 aaPredicted RBP12.34□□□□□ -0.43
SMARCC2-210ENST00000550519 RHEBQ15382 184 aa12.33□□□□□ -0.44
SMARCC2-210ENST00000550519 C10orf91Q5T1B1 145 aa12.33□□□□□ -0.44
SMARCC2-210ENST00000550519 RPS10P5Q9NQ39 176 aa12.33□□□□□ -0.44
SMARCC2-210ENST00000550519 TRAPPC1Q9Y5R8 145 aa12.32□□□□□ -0.44
SMARCC2-210ENST00000550519 ZNF706Q9Y5V0 76 aaPredicted RBP12.32□□□□□ -0.44
SMARCC2-210ENST00000550519 A0A0U1RRA0 63 aa12.31□□□□□ -0.44
SMARCC2-210ENST00000550519 C4orf48Q5BLP8 95 aa12.3□□□□□ -0.44
SMARCC2-210ENST00000550519 CHTOPQ9Y3Y2 248 aaKnown RBP12.3□□□□□ -0.44
SMARCC2-210ENST00000550519 TMEM223A0PJW6 202 aa12.29□□□□□ -0.44
SMARCC2-210ENST00000550519 PRYO14603 147 aa12.29□□□□□ -0.44
SMARCC2-210ENST00000550519 SPRR1AP35321 89 aa12.29□□□□□ -0.44
SMARCC2-210ENST00000550519 KRTAP13-3Q3SY46 172 aa12.28□□□□□ -0.44
SMARCC2-210ENST00000550519 LINC00337Q8N6G1 96 aa12.28□□□□□ -0.44
SMARCC2-210ENST00000550519 DAND5Q8N907 189 aa12.28□□□□□ -0.44
SMARCC2-210ENST00000550519 Q8NBF4 154 aa12.28□□□□□ -0.44
SMARCC2-210ENST00000550519 KRTAP9-6A0A140TA67 174 aa12.27□□□□□ -0.45
SMARCC2-210ENST00000550519 COMMD7Q86VX2 200 aa12.27□□□□□ -0.45
SMARCC2-210ENST00000550519 KCNQ1DNQ9H478 68 aa12.27□□□□□ -0.45
SMARCC2-210ENST00000550519 KRTAP4-16G5E9R7 235 aaPredicted RBP12.26□□□□□ -0.45
SMARCC2-210ENST00000550519 SMIM13P0DJ93 91 aa12.26□□□□□ -0.45
SMARCC2-210ENST00000550519 BOD1L2Q8IYS8 172 aa12.26□□□□□ -0.45
SMARCC2-210ENST00000550519 SMCR5Q8TEV8 140 aa12.26□□□□□ -0.45
SMARCC2-210ENST00000550519 TRAV12-1A0A0B4J245 112 aa12.24□□□□□ -0.45
SMARCC2-210ENST00000550519 SPINK1P00995 79 aa12.24□□□□□ -0.45
SMARCC2-210ENST00000550519 NCR3O14931 201 aa12.23□□□□□ -0.45
SMARCC2-210ENST00000550519 ATP6V1G1O75348 118 aa12.23□□□□□ -0.45
SMARCC2-210ENST00000550519 ASB16-AS1Q495Z4 193 aa12.23□□□□□ -0.45
SMARCC2-210ENST00000550519 MIR7-3HGQ8N6C7 128 aa12.23□□□□□ -0.45
SMARCC2-210ENST00000550519 LINC00483Q53H64 154 aa12.22□□□□□ -0.45
SMARCC2-210ENST00000550519 ETDCA0A1B0GVM5 59 aa12.21□□□□□ -0.45
SMARCC2-210ENST00000550519 MEIG1Q5JSS6 88 aa12.21□□□□□ -0.45
SMARCC2-210ENST00000550519 IFI27L1Q96BM0 104 aa12.21□□□□□ -0.45
SMARCC2-210ENST00000550519 TRBV10-3A0A0K0K1G6 114 aa12.2□□□□□ -0.46
SMARCC2-210ENST00000550519 HERV-K104P63124 156 aa12.2□□□□□ -0.46
SMARCC2-210ENST00000550519 LINC00587B1AMM8 73 aa12.17□□□□□ -0.46
SMARCC2-210ENST00000550519 CHCHD1Q96BP2 118 aaKnown RBP12.17□□□□□ -0.46
SMARCC2-210ENST00000550519 GAGE2AQ6NT46 116 aa12.16□□□□□ -0.46
SMARCC2-210ENST00000550519 KRTAP4-1Q9BYQ7 146 aa12.16□□□□□ -0.46
SMARCC2-210ENST00000550519 NDUFA12Q9UI09 145 aa12.16□□□□□ -0.46
SMARCC2-210ENST00000550519 B5MCH6 92 aa12.15□□□□□ -0.46
SMARCC2-210ENST00000550519 RPS29P62273 56 aaKnown RBP12.14□□□□□ -0.47
SMARCC2-210ENST00000550519 MYMXA0A1B0GTQ4 84 aa12.13□□□□□ -0.47
SMARCC2-210ENST00000550519 ERC2-IT1O76042 136 aa12.13□□□□□ -0.47
SMARCC2-210ENST00000550519 SEC61BP60468 96 aaKnown RBP12.13□□□□□ -0.47
SMARCC2-210ENST00000550519 S100A12P80511 92 aa12.13□□□□□ -0.47
SMARCC2-210ENST00000550519 MOBPQ13875 183 aa12.13□□□□□ -0.47
SMARCC2-210ENST00000550519 SSBP3-AS1Q7Z2R9 100 aa12.13□□□□□ -0.47
SMARCC2-210ENST00000550519 Q8N377 158 aa12.13□□□□□ -0.47
SMARCC2-210ENST00000550519 MAP1LC3CQ9BXW4 147 aa12.13□□□□□ -0.47
SMARCC2-210ENST00000550519 LOC107984156A0A0G2JMH3 177 aa12.12□□□□□ -0.47
SMARCC2-210ENST00000550519 ARL17AQ8IVW1 177 aa12.12□□□□□ -0.47
SMARCC2-210ENST00000550519 IGLV9-49A0A0B4J1Y8 123 aa12.11□□□□□ -0.47
SMARCC2-210ENST00000550519 APOC3P02656 99 aa12.11□□□□□ -0.47
SMARCC2-210ENST00000550519 LINC01547P58512 204 aaPredicted RBP12.11□□□□□ -0.47
SMARCC2-210ENST00000550519 FAM19A2Q8N3H0 131 aa12.1□□□□□ -0.47
SMARCC2-210ENST00000550519 Q9BRP9 147 aa12.1□□□□□ -0.47
SMARCC2-210ENST00000550519 TRBV10-2A0A0K0K1G8 114 aa12.09□□□□□ -0.47
SMARCC2-210ENST00000550519 DDTP30046 118 aa12.09□□□□□ -0.47
SMARCC2-210ENST00000550519 YPEL4Q96NS1 127 aa12.09□□□□□ -0.47
SMARCC2-210ENST00000550519 SNAPINO95295 136 aa12.08□□□□□ -0.48
SMARCC2-210ENST00000550519 TSPEAR-AS2P59090 65 aa12.08□□□□□ -0.48
SMARCC2-210ENST00000550519 Q6ZRX8 168 aa12.08□□□□□ -0.48
SMARCC2-210ENST00000550519 SLC25A20O43772 301 aa12.07□□□□□ -0.48
SMARCC2-210ENST00000550519 SVBPQ8N300 66 aa12.06□□□□□ -0.48
SMARCC2-210ENST00000550519 LEPROTO15243 131 aa12.05□□□□□ -0.48
SMARCC2-210ENST00000550519 HSBP1O75506 76 aa12.05□□□□□ -0.48
SMARCC2-210ENST00000550519 XP32Q5T750 250 aa12.04□□□□□ -0.48
SMARCC2-210ENST00000550519 SPANXB1Q9NS25 103 aaPredicted RBP12.04□□□□□ -0.48
SMARCC2-210ENST00000550519 NDUFA5Q16718 116 aa12.03□□□□□ -0.48
SMARCC2-210ENST00000550519 H0Y8G0 127 aa12.02□□□□□ -0.49
SMARCC2-210ENST00000550519 IGLV6-57P01721 117 aa12.02□□□□□ -0.49
SMARCC2-210ENST00000550519 LCE2DQ5TA82 110 aaPredicted RBP12.02□□□□□ -0.49
SMARCC2-210ENST00000550519 NDUFC2O95298 119 aa12.01□□□□□ -0.49
SMARCC2-210ENST00000550519 J3QQQ9 107 aa12□□□□□ -0.49
SMARCC2-210ENST00000550519 S100A7L2Q5SY68 101 aa11.99□□□□□ -0.49
SMARCC2-210ENST00000550519 MIEN1Q9BRT3 115 aa11.99□□□□□ -0.49
SMARCC2-210ENST00000550519 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
SMARCC2-210ENST00000550519 PLNP26678 52 aa11.98□□□□□ -0.49
SMARCC2-210ENST00000550519 JOSD1Q15040 202 aaPredicted RBP11.98□□□□□ -0.49
SMARCC2-210ENST00000550519 NMUP48645 174 aa11.97□□□□□ -0.49
SMARCC2-210ENST00000550519 TRAV23DV6A0A075B6W5 121 aa11.96□□□□□ -0.49
SMARCC2-210ENST00000550519 LINC00310P59036 64 aa11.96□□□□□ -0.49
SMARCC2-210ENST00000550519 C9orf153Q5TBE3 101 aa11.96□□□□□ -0.49
SMARCC2-210ENST00000550519 ZNF73O43830 326 aaPredicted RBP11.94□□□□□ -0.5
SMARCC2-210ENST00000550519 HERVK_113P61574 105 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms