RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 PTTG1IPP53801 180 aa6.59□□□□□ -1.35
RAB5C-207ENST00000550504 SND1-IT1Q9HBX3 110 aa6.59□□□□□ -1.35
RAB5C-207ENST00000550504 PKIGQ9Y2B9 76 aa6.59□□□□□ -1.35
RAB5C-207ENST00000550504 KRTAP10-1P60331 282 aa6.58□□□□□ -1.36
RAB5C-207ENST00000550504 SRSF9Q13242 221 aaKnown RBP eCLIP6.58□□□□□ -1.36
RAB5C-207ENST00000550504 PKHD1P08F94 4074 aa6.57□□□□□ -1.36
RAB5C-207ENST00000550504 PANO1I0J062 215 aa6.57□□□□□ -1.36
RAB5C-207ENST00000550504 C9orf129Q5T035 196 aaKnown RBP6.57□□□□□ -1.36
RAB5C-207ENST00000550504 HIST1H4GQ99525 98 aa6.57□□□□□ -1.36
RAB5C-207ENST00000550504 SPANXDQ9BXN6 97 aa6.57□□□□□ -1.36
RAB5C-207ENST00000550504 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
RAB5C-207ENST00000550504 HIGD1BQ9P298 99 aa6.57□□□□□ -1.36
RAB5C-207ENST00000550504 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.57□□□□□ -1.36
RAB5C-207ENST00000550504 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
RAB5C-207ENST00000550504 BATFQ16520 125 aa6.56□□□□□ -1.36
RAB5C-207ENST00000550504 SOSTDC1Q6X4U4 206 aa6.56□□□□□ -1.36
RAB5C-207ENST00000550504 MUSTN1Q8IVN3 82 aa6.56□□□□□ -1.36
RAB5C-207ENST00000550504 LINC00308Q8TCZ7 52 aa6.56□□□□□ -1.36
RAB5C-207ENST00000550504 DPH3Q96FX2 82 aa6.56□□□□□ -1.36
RAB5C-207ENST00000550504 SPANXB1Q9NS25 103 aaPredicted RBP6.56□□□□□ -1.36
RAB5C-207ENST00000550504 FAM168BA1KXE4 195 aa6.55□□□□□ -1.36
RAB5C-207ENST00000550504 FAM30AQ9NZY2 134 aa6.55□□□□□ -1.36
RAB5C-207ENST00000550504 HINT1P49773 126 aaPredicted RBP6.54□□□□□ -1.36
RAB5C-207ENST00000550504 Q6ZVH6 145 aa6.54□□□□□ -1.36
RAB5C-207ENST00000550504 FAM19A5Q7Z5A7 132 aaPredicted RBP6.54□□□□□ -1.36
RAB5C-207ENST00000550504 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
RAB5C-207ENST00000550504 LINC00474Q9P2X8 69 aa6.54□□□□□ -1.36
RAB5C-207ENST00000550504 PKD1P98161 4303 aa6.54□□□□□ -1.36
RAB5C-207ENST00000550504 A0A1W2PNN7 141 aa6.53□□□□□ -1.36
RAB5C-207ENST00000550504 IFITM1P13164 125 aa6.53□□□□□ -1.36
RAB5C-207ENST00000550504 PRR3P79522 188 aaKnown RBP6.53□□□□□ -1.36
RAB5C-207ENST00000550504 UBE2V1Q13404 147 aa6.53□□□□□ -1.36
RAB5C-207ENST00000550504 SERTAD4-AS1Q5TG53 156 aa6.53□□□□□ -1.36
RAB5C-207ENST00000550504 Q8NDZ9 215 aa6.53□□□□□ -1.36
RAB5C-207ENST00000550504 A0A087WYN8 130 aa6.52□□□□□ -1.37
RAB5C-207ENST00000550504 HAMPP81172 84 aa6.52□□□□□ -1.37
RAB5C-207ENST00000550504 HSD52Q0P140 79 aa6.52□□□□□ -1.37
RAB5C-207ENST00000550504 BVES-AS1Q5T3Y7 98 aa6.52□□□□□ -1.37
RAB5C-207ENST00000550504 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
RAB5C-207ENST00000550504 LOC107984156A0A0G2JMH3 177 aa6.51□□□□□ -1.37
RAB5C-207ENST00000550504 TAX1BP3O14907 124 aa6.51□□□□□ -1.37
RAB5C-207ENST00000550504 NCR3O14931 201 aa6.51□□□□□ -1.37
RAB5C-207ENST00000550504 VPREB1P12018 145 aa6.51□□□□□ -1.37
RAB5C-207ENST00000550504 RPL24P83731 157 aaKnown RBP6.51□□□□□ -1.37
RAB5C-207ENST00000550504 TAL2Q16559 108 aa6.51□□□□□ -1.37
RAB5C-207ENST00000550504 Q6ZSA8 131 aa6.51□□□□□ -1.37
RAB5C-207ENST00000550504 KRTAP7-1Q8IUC3 87 aa6.51□□□□□ -1.37
RAB5C-207ENST00000550504 ARL17AQ8IVW1 177 aa6.51□□□□□ -1.37
RAB5C-207ENST00000550504 A4D1N5 150 aa6.5□□□□□ -1.37
RAB5C-207ENST00000550504 SCXQ7RTU7 201 aa6.5□□□□□ -1.37
RAB5C-207ENST00000550504 CEND1Q8N111 149 aa6.5□□□□□ -1.37
RAB5C-207ENST00000550504 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
RAB5C-207ENST00000550504 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
RAB5C-207ENST00000550504 GAGE10A6NGK3 116 aa6.49□□□□□ -1.37
RAB5C-207ENST00000550504 M0QXV9 152 aa6.49□□□□□ -1.37
RAB5C-207ENST00000550504 NDUFC2O95298 119 aa6.49□□□□□ -1.37
RAB5C-207ENST00000550504 FXYD2P54710 66 aa6.49□□□□□ -1.37
RAB5C-207ENST00000550504 CBY1Q9Y3M2 126 aa6.49□□□□□ -1.37
RAB5C-207ENST00000550504 C22orf24Q9Y442 160 aa6.49□□□□□ -1.37
RAB5C-207ENST00000550504 IGKV2-28A0A075B6P5 120 aa6.48□□□□□ -1.37
RAB5C-207ENST00000550504 IGKV2D-28P01615 120 aa6.48□□□□□ -1.37
RAB5C-207ENST00000550504 PHF5AQ7RTV0 110 aaKnown RBP6.48□□□□□ -1.37
RAB5C-207ENST00000550504 CIRBP-AS1Q8TBR5 109 aa6.48□□□□□ -1.37
RAB5C-207ENST00000550504 PPDPFQ9H3Y8 114 aa6.48□□□□□ -1.37
RAB5C-207ENST00000550504 PLAC8Q9NZF1 115 aa6.48□□□□□ -1.37
RAB5C-207ENST00000550504 IGLV5-37A0A075B6J1 123 aa6.47□□□□□ -1.37
RAB5C-207ENST00000550504 MRPL55Q7Z7F7 128 aaKnown RBP6.47□□□□□ -1.37
RAB5C-207ENST00000550504 C7orf33Q8WU49 177 aa6.47□□□□□ -1.37
RAB5C-207ENST00000550504 DNAH5Q8TE73 4624 aa6.46□□□□□ -1.38
RAB5C-207ENST00000550504 TMEM238LA0A1B0GVL6 79 aa6.46□□□□□ -1.38
RAB5C-207ENST00000550504 A6NJY4 79 aa6.46□□□□□ -1.38
RAB5C-207ENST00000550504 M0R378 163 aa6.46□□□□□ -1.38
RAB5C-207ENST00000550504 OR13C6PQ8NH95 151 aa6.46□□□□□ -1.38
RAB5C-207ENST00000550504 LINC00167Q96N53 147 aa6.46□□□□□ -1.38
RAB5C-207ENST00000550504 HSPG2P98160 4391 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 TRBV10-2A0A0K0K1G8 114 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 A6NDN8 102 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 RPL37AP8A6NKH3 93 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 EPM2AB3EWF7 344 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 CFC1BP0CG36 223 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 CFC1P0CG37 223 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 XGP55808 180 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 UBE2BP63146 152 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 S100A7L2Q5SY68 101 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 LINC00337Q8N6G1 96 aa6.45□□□□□ -1.38
RAB5C-207ENST00000550504 NHP2Q9NX24 153 aaKnown RBP6.45□□□□□ -1.38
RAB5C-207ENST00000550504 HERC1Q15751 4861 aa6.44□□□□□ -1.38
RAB5C-207ENST00000550504 TRBV10-3A0A0K0K1G6 114 aa6.44□□□□□ -1.38
RAB5C-207ENST00000550504 RAB37Q96AX2 223 aa6.44□□□□□ -1.38
RAB5C-207ENST00000550504 TRAV13-2A0A0B4J235 113 aa6.43□□□□□ -1.38
RAB5C-207ENST00000550504 K7ERJ3 54 aa6.43□□□□□ -1.38
RAB5C-207ENST00000550504 KRTAP11-1Q8IUC1 163 aa6.43□□□□□ -1.38
RAB5C-207ENST00000550504 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
RAB5C-207ENST00000550504 H7C2G1 150 aa6.42□□□□□ -1.38
RAB5C-207ENST00000550504 IGLV6-57P01721 117 aa6.42□□□□□ -1.38
RAB5C-207ENST00000550504 SMR3BP02814 79 aaPredicted RBP6.42□□□□□ -1.38
RAB5C-207ENST00000550504 RPL13AP40429 203 aaKnown RBP6.42□□□□□ -1.38
RAB5C-207ENST00000550504 VAMP3Q15836 100 aa6.42□□□□□ -1.38
RAB5C-207ENST00000550504 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
RAB5C-207ENST00000550504 IGLV1-50A0A075B6I6 118 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms