RNA–Protein interactions for RNA: ENST00000550290.2

AC048341.2-201, humanhuman

TSL 4 BASIC

Gene AC048341.2, Length 8,693 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048341.2-201ENST00000550290 COL7A1Q02388 2944 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 TMEM223A0PJW6 202 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 NUPR1O60356 82 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 TMEM238LA0A1B0GVL6 79 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 A6NJY4 79 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 COX6CP09669 75 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 TRAV23DV6A0A075B6W5 121 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 PANO1I0J062 215 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST1H2BKO60814 126 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST1H2BJP06899 126 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST1H2BOP23527 126 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST1H2BBP33778 126 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST1H2BDP58876 126 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST1H2BCP62807 126 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST2H2BEQ16778 126 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST1H2BHQ93079 126 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST1H2BNQ99877 126 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 HIST1H2BMQ99879 126 aa3.56□□□□□ -1.84
AC048341.2-201ENST00000550290 SLPIP03973 132 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 COX7BP24311 80 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 IGIPA6NJ69 53 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 FAM19A3Q7Z5A8 133 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 SMCR5Q8TEV8 140 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 CRYGAP11844 174 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 PET117Q6UWS5 81 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 PRR34Q9NV39 138 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 MUSTN1Q8IVN3 82 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 C9orf92A6NGG3 77 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 IGLV7-43P04211 117 aa3.55□□□□□ -1.84
AC048341.2-201ENST00000550290 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
AC048341.2-201ENST00000550290 NDUFS5O43920 106 aa3.54□□□□□ -1.84
AC048341.2-201ENST00000550290 CSDC2Q9Y534 153 aaKnown RBP3.54□□□□□ -1.84
AC048341.2-201ENST00000550290 SDIM1Q6ZPB5 146 aa3.54□□□□□ -1.84
AC048341.2-201ENST00000550290 NHP2Q9NX24 153 aaKnown RBP3.54□□□□□ -1.84
AC048341.2-201ENST00000550290 SLC25A34Q6PIV7 304 aa3.53□□□□□ -1.84
AC048341.2-201ENST00000550290 IGHV3OR16-9A0A0B4J2B5 98 aa3.53□□□□□ -1.84
AC048341.2-201ENST00000550290 TRAV13-2A0A0B4J235 113 aa3.53□□□□□ -1.84
AC048341.2-201ENST00000550290 BCE1O60756 84 aa3.53□□□□□ -1.84
AC048341.2-201ENST00000550290 IGLC3P0DOY3 106 aa3.53□□□□□ -1.84
AC048341.2-201ENST00000550290 Q6ZRN7 208 aaPredicted RBP3.53□□□□□ -1.84
AC048341.2-201ENST00000550290 DNAH3Q8TD57 4116 aa3.52□□□□□ -1.85
AC048341.2-201ENST00000550290 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
AC048341.2-201ENST00000550290 C9orf129Q5T035 196 aaKnown RBP3.52□□□□□ -1.85
AC048341.2-201ENST00000550290 A0A0J9YXY3 114 aa3.52□□□□□ -1.85
AC048341.2-201ENST00000550290 SIGMAR1Q99720 223 aa3.52□□□□□ -1.85
AC048341.2-201ENST00000550290 FAM236DA0A1B0GTK5 79 aa3.52□□□□□ -1.85
AC048341.2-201ENST00000550290 COLCA2A8K830 154 aa3.52□□□□□ -1.85
AC048341.2-201ENST00000550290 FAM236CP0DP71 79 aa3.52□□□□□ -1.85
AC048341.2-201ENST00000550290 CNBPP62633 177 aaKnown RBP3.52□□□□□ -1.85
AC048341.2-201ENST00000550290 LINC00304Q8N9R0 145 aa3.52□□□□□ -1.85
AC048341.2-201ENST00000550290 C6orf99Q4VX62 202 aa3.51□□□□□ -1.85
AC048341.2-201ENST00000550290 NAA38Q9BRA0 125 aaKnown RBP3.51□□□□□ -1.85
AC048341.2-201ENST00000550290 STAB2Q8WWQ8 2551 aa3.51□□□□□ -1.85
AC048341.2-201ENST00000550290 AMELXQ99217 191 aa3.51□□□□□ -1.85
AC048341.2-201ENST00000550290 KRTAP4-5Q9BYR2 181 aa3.51□□□□□ -1.85
AC048341.2-201ENST00000550290 COX17Q14061 63 aa3.51□□□□□ -1.85
AC048341.2-201ENST00000550290 Q9BRP9 147 aa3.51□□□□□ -1.85
AC048341.2-201ENST00000550290 SPANXB1Q9NS25 103 aaPredicted RBP3.5□□□□□ -1.85
AC048341.2-201ENST00000550290 DNAH7Q8WXX0 4024 aa3.5□□□□□ -1.85
AC048341.2-201ENST00000550290 PRSS47A8MTI9 375 aa3.5□□□□□ -1.85
AC048341.2-201ENST00000550290 TRAV12-1A0A0B4J245 112 aa3.5□□□□□ -1.85
AC048341.2-201ENST00000550290 ZNF861PO60384 105 aa3.5□□□□□ -1.85
AC048341.2-201ENST00000550290 F8WDY8 70 aa3.5□□□□□ -1.85
AC048341.2-201ENST00000550290 H0Y9J4 135 aa3.5□□□□□ -1.85
AC048341.2-201ENST00000550290 E9PLD3 99 aa3.49□□□□□ -1.85
AC048341.2-201ENST00000550290 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
AC048341.2-201ENST00000550290 Q8NBF4 154 aa3.49□□□□□ -1.85
AC048341.2-201ENST00000550290 hADV29S1A0JD25 119 aa3.48□□□□□ -1.85
AC048341.2-201ENST00000550290 ANKRD39Q53RE8 183 aa3.48□□□□□ -1.85
AC048341.2-201ENST00000550290 ST20-AS1Q8NBB2 130 aa3.48□□□□□ -1.85
AC048341.2-201ENST00000550290 ZNF73O43830 326 aaPredicted RBP3.48□□□□□ -1.85
AC048341.2-201ENST00000550290 TSPEAR-AS2P59090 65 aa3.48□□□□□ -1.85
AC048341.2-201ENST00000550290 PLAC8Q9NZF1 115 aa3.48□□□□□ -1.85
AC048341.2-201ENST00000550290 C10orf91Q5T1B1 145 aa3.48□□□□□ -1.85
AC048341.2-201ENST00000550290 A4D1N5 150 aa3.47□□□□□ -1.85
AC048341.2-201ENST00000550290 PRYO14603 147 aa3.47□□□□□ -1.85
AC048341.2-201ENST00000550290 C3orf22Q8N5N4 141 aa3.47□□□□□ -1.85
AC048341.2-201ENST00000550290 LINC00308Q8TCZ7 52 aa3.47□□□□□ -1.85
AC048341.2-201ENST00000550290 K7ERJ3 54 aa3.47□□□□□ -1.85
AC048341.2-201ENST00000550290 HIST1H2BLQ99880 126 aa3.47□□□□□ -1.85
AC048341.2-201ENST00000550290 MEGF8Q7Z7M0 2845 aa3.47□□□□□ -1.85
AC048341.2-201ENST00000550290 DSCR8Q96T75 97 aa3.47□□□□□ -1.85
AC048341.2-201ENST00000550290 IGLV7-46A0A075B6I9 117 aa3.46□□□□□ -1.86
AC048341.2-201ENST00000550290 RNF151Q2KHN1 245 aa3.46□□□□□ -1.86
AC048341.2-201ENST00000550290 TENM3Q9P273 2699 aa3.46□□□□□ -1.86
AC048341.2-201ENST00000550290 DEFB116Q30KQ4 102 aa3.46□□□□□ -1.86
AC048341.2-201ENST00000550290 HIST3H2BBQ8N257 126 aa3.46□□□□□ -1.86
AC048341.2-201ENST00000550290 H3BUT2 72 aa3.46□□□□□ -1.86
AC048341.2-201ENST00000550290 SMIM11BQ8TCY0 68 aa3.46□□□□□ -1.86
AC048341.2-201ENST00000550290 SPANXCQ9NY87 97 aa3.46□□□□□ -1.86
AC048341.2-201ENST00000550290 CTAG1AP78358 180 aa3.46□□□□□ -1.86
AC048341.2-201ENST00000550290 GHRHP01286 108 aa3.45□□□□□ -1.86
AC048341.2-201ENST00000550290 URB1-AS1Q96HZ7 61 aa3.45□□□□□ -1.86
AC048341.2-201ENST00000550290 TP73-AS1Q9UF72 201 aa3.45□□□□□ -1.86
AC048341.2-201ENST00000550290 LINC01561Q8N1V8 128 aa3.45□□□□□ -1.86
AC048341.2-201ENST00000550290 CLEC2BQ92478 149 aa3.45□□□□□ -1.86
AC048341.2-201ENST00000550290 A0A0G2JQZ4 141 aa3.45□□□□□ -1.86
AC048341.2-201ENST00000550290 ADAMTSL4-AS1Q5T5F5 129 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms