RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 LINC01549A6NIU2 74 aa6.48□□□□□ -1.37
SMARCD1-208ENST00000550280 RPL24P83731 157 aaKnown RBP6.48□□□□□ -1.37
SMARCD1-208ENST00000550280 COX17Q14061 63 aa6.48□□□□□ -1.37
SMARCD1-208ENST00000550280 Q8NBF4 154 aa6.48□□□□□ -1.37
SMARCD1-208ENST00000550280 GNB1LQ9BYB4 327 aa6.48□□□□□ -1.37
SMARCD1-208ENST00000550280 C11orf86A6NJI1 115 aa6.47□□□□□ -1.37
SMARCD1-208ENST00000550280 CRCT1Q9UGL9 99 aa6.47□□□□□ -1.37
SMARCD1-208ENST00000550280 TRAV9-1A0A075B6T8 112 aa6.46□□□□□ -1.38
SMARCD1-208ENST00000550280 KRTAP4-16G5E9R7 235 aaPredicted RBP6.46□□□□□ -1.38
SMARCD1-208ENST00000550280 SPRR1AP35321 89 aa6.46□□□□□ -1.38
SMARCD1-208ENST00000550280 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.38
SMARCD1-208ENST00000550280 LINC01547P58512 204 aaPredicted RBP6.45□□□□□ -1.38
SMARCD1-208ENST00000550280 FA2HQ7L5A8 372 aa6.45□□□□□ -1.38
SMARCD1-208ENST00000550280 SMCR5Q8TEV8 140 aa6.45□□□□□ -1.38
SMARCD1-208ENST00000550280 A0A0U1RRA0 63 aa6.44□□□□□ -1.38
SMARCD1-208ENST00000550280 NDUFA6P56556 154 aa6.44□□□□□ -1.38
SMARCD1-208ENST00000550280 PMCHL1Q16048 86 aa6.44□□□□□ -1.38
SMARCD1-208ENST00000550280 LINC00337Q8N6G1 96 aa6.44□□□□□ -1.38
SMARCD1-208ENST00000550280 LINC00483Q53H64 154 aa6.43□□□□□ -1.38
SMARCD1-208ENST00000550280 Q8N377 158 aa6.43□□□□□ -1.38
SMARCD1-208ENST00000550280 SMCO4Q9NRQ5 59 aa6.43□□□□□ -1.38
SMARCD1-208ENST00000550280 TMEM218A2RU14 115 aa6.42□□□□□ -1.38
SMARCD1-208ENST00000550280 ERC2-IT1O76042 136 aa6.42□□□□□ -1.38
SMARCD1-208ENST00000550280 SPINK1P00995 79 aa6.42□□□□□ -1.38
SMARCD1-208ENST00000550280 LINC00158P58513 81 aa6.42□□□□□ -1.38
SMARCD1-208ENST00000550280 FABP9Q0Z7S8 132 aa6.42□□□□□ -1.38
SMARCD1-208ENST00000550280 C18orf32Q8TCD1 76 aa6.42□□□□□ -1.38
SMARCD1-208ENST00000550280 KCNQ1DNQ9H478 68 aa6.42□□□□□ -1.38
SMARCD1-208ENST00000550280 PRYO14603 147 aa6.41□□□□□ -1.38
SMARCD1-208ENST00000550280 NCR3O14931 201 aa6.41□□□□□ -1.38
SMARCD1-208ENST00000550280 SEC61BP60468 96 aaKnown RBP6.41□□□□□ -1.38
SMARCD1-208ENST00000550280 C4orf48Q5BLP8 95 aa6.41□□□□□ -1.38
SMARCD1-208ENST00000550280 CLLU1Q5K131 121 aa6.41□□□□□ -1.38
SMARCD1-208ENST00000550280 TMEM170BQ5T4T1 132 aa6.41□□□□□ -1.38
SMARCD1-208ENST00000550280 XP32Q5T750 250 aa6.41□□□□□ -1.38
SMARCD1-208ENST00000550280 BAGE3Q86Y29 109 aa6.41□□□□□ -1.38
SMARCD1-208ENST00000550280 ZNF706Q9Y5V0 76 aaPredicted RBP6.41□□□□□ -1.38
SMARCD1-208ENST00000550280 HBDP02042 147 aa6.4□□□□□ -1.38
SMARCD1-208ENST00000550280 SMIM13P0DJ93 91 aa6.4□□□□□ -1.38
SMARCD1-208ENST00000550280 TRBV10-3A0A0K0K1G6 114 aa6.39□□□□□ -1.39
SMARCD1-208ENST00000550280 TMEM223A0PJW6 202 aa6.39□□□□□ -1.39
SMARCD1-208ENST00000550280 LINC00614P0C842 121 aa6.39□□□□□ -1.39
SMARCD1-208ENST00000550280 MOBPQ13875 183 aa6.39□□□□□ -1.39
SMARCD1-208ENST00000550280 BOD1L2Q8IYS8 172 aa6.39□□□□□ -1.39
SMARCD1-208ENST00000550280 MT1HP80294 61 aa6.38□□□□□ -1.39
SMARCD1-208ENST00000550280 GAGE2AQ6NT46 116 aa6.38□□□□□ -1.39
SMARCD1-208ENST00000550280 SFTA2Q6UW10 78 aa6.38□□□□□ -1.39
SMARCD1-208ENST00000550280 MIR7-3HGQ8N6C7 128 aa6.38□□□□□ -1.39
SMARCD1-208ENST00000550280 Q9BRP9 147 aa6.38□□□□□ -1.39
SMARCD1-208ENST00000550280 B5MCH6 92 aa6.37□□□□□ -1.39
SMARCD1-208ENST00000550280 S100PP25815 95 aa6.37□□□□□ -1.39
SMARCD1-208ENST00000550280 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
SMARCD1-208ENST00000550280 COX19Q49B96 90 aa6.37□□□□□ -1.39
SMARCD1-208ENST00000550280 UQCC3Q6UW78 93 aa6.37□□□□□ -1.39
SMARCD1-208ENST00000550280 SEC11CQ9BY50 192 aa6.37□□□□□ -1.39
SMARCD1-208ENST00000550280 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
SMARCD1-208ENST00000550280 ETDCA0A1B0GVM5 59 aa6.36□□□□□ -1.39
SMARCD1-208ENST00000550280 IFITM2Q01629 132 aa6.36□□□□□ -1.39
SMARCD1-208ENST00000550280 CHTOPQ9Y3Y2 248 aaKnown RBP6.36□□□□□ -1.39
SMARCD1-208ENST00000550280 C10orf91Q5T1B1 145 aa6.34□□□□□ -1.39
SMARCD1-208ENST00000550280 SSBP3-AS1Q7Z2R9 100 aa6.34□□□□□ -1.39
SMARCD1-208ENST00000550280 SLC25A20O43772 301 aa6.33□□□□□ -1.4
SMARCD1-208ENST00000550280 TSPEAR-AS2P59090 65 aa6.33□□□□□ -1.4
SMARCD1-208ENST00000550280 MEIG1Q5JSS6 88 aa6.33□□□□□ -1.4
SMARCD1-208ENST00000550280 TRAPPC1Q9Y5R8 145 aa6.33□□□□□ -1.4
SMARCD1-208ENST00000550280 TRAV12-1A0A0B4J245 112 aa6.32□□□□□ -1.4
SMARCD1-208ENST00000550280 LOC107984156A0A0G2JMH3 177 aa6.32□□□□□ -1.4
SMARCD1-208ENST00000550280 ARL17AQ8IVW1 177 aa6.32□□□□□ -1.4
SMARCD1-208ENST00000550280 FAM19A2Q8N3H0 131 aa6.32□□□□□ -1.4
SMARCD1-208ENST00000550280 RPS10P5Q9NQ39 176 aa6.32□□□□□ -1.4
SMARCD1-208ENST00000550280 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
SMARCD1-208ENST00000550280 Q6ZRX8 168 aa6.31□□□□□ -1.4
SMARCD1-208ENST00000550280 NDUFA12Q9UI09 145 aa6.31□□□□□ -1.4
SMARCD1-208ENST00000550280 HERV-K104P63124 156 aa6.3□□□□□ -1.4
SMARCD1-208ENST00000550280 RHEBQ15382 184 aa6.3□□□□□ -1.4
SMARCD1-208ENST00000550280 IFI27L1Q96BM0 104 aa6.3□□□□□ -1.4
SMARCD1-208ENST00000550280 EIF4EBP3O60516 100 aaPredicted RBP6.29□□□□□ -1.4
SMARCD1-208ENST00000550280 ATP6V1G1O75348 118 aa6.29□□□□□ -1.4
SMARCD1-208ENST00000550280 DDTP30046 118 aa6.29□□□□□ -1.4
SMARCD1-208ENST00000550280 PCOTHQ58A44 107 aa6.29□□□□□ -1.4
SMARCD1-208ENST00000550280 ST20-AS1Q8NBB2 130 aa6.29□□□□□ -1.4
SMARCD1-208ENST00000550280 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
SMARCD1-208ENST00000550280 TRBV10-2A0A0K0K1G8 114 aa6.28□□□□□ -1.4
SMARCD1-208ENST00000550280 IGLV6-57P01721 117 aa6.28□□□□□ -1.4
SMARCD1-208ENST00000550280 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
SMARCD1-208ENST00000550280 COMMD7Q86VX2 200 aa6.28□□□□□ -1.4
SMARCD1-208ENST00000550280 SOSTDC1Q6X4U4 206 aa6.27□□□□□ -1.41
SMARCD1-208ENST00000550280 MYMXA0A1B0GTQ4 84 aa6.26□□□□□ -1.41
SMARCD1-208ENST00000550280 YPEL4Q96NS1 127 aa6.26□□□□□ -1.41
SMARCD1-208ENST00000550280 IGLV8-61A0A075B6I0 122 aa6.25□□□□□ -1.41
SMARCD1-208ENST00000550280 C9orf153Q5TBE3 101 aa6.25□□□□□ -1.41
SMARCD1-208ENST00000550280 CHCHD1Q96BP2 118 aaKnown RBP6.25□□□□□ -1.41
SMARCD1-208ENST00000550280 SPANXB1Q9NS25 103 aaPredicted RBP6.25□□□□□ -1.41
SMARCD1-208ENST00000550280 C9orf92A6NGG3 77 aa6.24□□□□□ -1.41
SMARCD1-208ENST00000550280 LINC00587B1AMM8 73 aa6.24□□□□□ -1.41
SMARCD1-208ENST00000550280 TRAV23DV6A0A075B6W5 121 aa6.23□□□□□ -1.41
SMARCD1-208ENST00000550280 LEPROTO15243 131 aa6.23□□□□□ -1.41
SMARCD1-208ENST00000550280 CFC1BP0CG36 223 aa6.23□□□□□ -1.41
SMARCD1-208ENST00000550280 LINC00310P59036 64 aa6.23□□□□□ -1.41
SMARCD1-208ENST00000550280 MAP1LC3CQ9BXW4 147 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms