RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 KRTAP13-3Q3SY46 172 aa5.59□□□□□ -1.51
TRAFD1-207ENST00000550051 FAM19A1Q7Z5A9 133 aa5.59□□□□□ -1.51
TRAFD1-207ENST00000550051 C3orf22Q8N5N4 141 aa5.59□□□□□ -1.51
TRAFD1-207ENST00000550051 LINC00337Q8N6G1 96 aa5.59□□□□□ -1.51
TRAFD1-207ENST00000550051 CST9LQ9H4G1 147 aa5.59□□□□□ -1.51
TRAFD1-207ENST00000550051 TMEM238C9JI98 176 aa5.58□□□□□ -1.52
TRAFD1-207ENST00000550051 SPINK8P0C7L1 97 aa5.58□□□□□ -1.52
TRAFD1-207ENST00000550051 ADCYAP1P18509 176 aa5.58□□□□□ -1.52
TRAFD1-207ENST00000550051 RPL24P83731 157 aaKnown RBP5.58□□□□□ -1.52
TRAFD1-207ENST00000550051 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
TRAFD1-207ENST00000550051 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
TRAFD1-207ENST00000550051 CBLN2Q8IUK8 224 aa5.58□□□□□ -1.52
TRAFD1-207ENST00000550051 SND1-IT1Q9HBX3 110 aa5.58□□□□□ -1.52
TRAFD1-207ENST00000550051 LINC01546A6NGU7 62 aa5.57□□□□□ -1.52
TRAFD1-207ENST00000550051 COX17Q14061 63 aa5.57□□□□□ -1.52
TRAFD1-207ENST00000550051 CRCT1Q9UGL9 99 aa5.57□□□□□ -1.52
TRAFD1-207ENST00000550051 IGLV5-39A0A0G2JS06 123 aa5.56□□□□□ -1.52
TRAFD1-207ENST00000550051 H3BRM9 83 aa5.56□□□□□ -1.52
TRAFD1-207ENST00000550051 PFN2P35080 140 aa5.56□□□□□ -1.52
TRAFD1-207ENST00000550051 PMVKQ15126 192 aa5.56□□□□□ -1.52
TRAFD1-207ENST00000550051 SPRR4Q96PI1 79 aa5.56□□□□□ -1.52
TRAFD1-207ENST00000550051 KRTAP4-1Q9BYQ7 146 aa5.56□□□□□ -1.52
TRAFD1-207ENST00000550051 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
TRAFD1-207ENST00000550051 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
TRAFD1-207ENST00000550051 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
TRAFD1-207ENST00000550051 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
TRAFD1-207ENST00000550051 ERG28Q9UKR5 140 aa5.55□□□□□ -1.52
TRAFD1-207ENST00000550051 SPINK1P00995 79 aa5.54□□□□□ -1.52
TRAFD1-207ENST00000550051 KIAA1644Q3SXP7 199 aa5.54□□□□□ -1.52
TRAFD1-207ENST00000550051 Q8NDZ9 215 aa5.54□□□□□ -1.52
TRAFD1-207ENST00000550051 HIGD2AQ9BW72 106 aa5.54□□□□□ -1.52
TRAFD1-207ENST00000550051 RAB14P61106 215 aa5.53□□□□□ -1.52
TRAFD1-207ENST00000550051 ZNF706Q9Y5V0 76 aaPredicted RBP5.53□□□□□ -1.52
TRAFD1-207ENST00000550051 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
TRAFD1-207ENST00000550051 IGLC3P0DOY3 106 aa5.52□□□□□ -1.53
TRAFD1-207ENST00000550051 SFTA2Q6UW10 78 aa5.52□□□□□ -1.53
TRAFD1-207ENST00000550051 Q8NBF4 154 aa5.52□□□□□ -1.53
TRAFD1-207ENST00000550051 DAND5Q8N907 189 aa5.51□□□□□ -1.53
TRAFD1-207ENST00000550051 TRAV9-1A0A075B6T8 112 aa5.5□□□□□ -1.53
TRAFD1-207ENST00000550051 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
TRAFD1-207ENST00000550051 RPS29P62273 56 aaKnown RBP5.5□□□□□ -1.53
TRAFD1-207ENST00000550051 ZNF625Q96I27 306 aaPredicted RBP5.5□□□□□ -1.53
TRAFD1-207ENST00000550051 A0A1B0GVG6 124 aa5.49□□□□□ -1.53
TRAFD1-207ENST00000550051 SPRR1AP35321 89 aa5.49□□□□□ -1.53
TRAFD1-207ENST00000550051 LINC00483Q53H64 154 aa5.49□□□□□ -1.53
TRAFD1-207ENST00000550051 SSBP3-AS1Q7Z2R9 100 aa5.49□□□□□ -1.53
TRAFD1-207ENST00000550051 SMCR5Q8TEV8 140 aa5.49□□□□□ -1.53
TRAFD1-207ENST00000550051 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
TRAFD1-207ENST00000550051 FA2HQ7L5A8 372 aa5.48□□□□□ -1.53
TRAFD1-207ENST00000550051 Q8N377 158 aa5.48□□□□□ -1.53
TRAFD1-207ENST00000550051 KCNQ1DNQ9H478 68 aa5.48□□□□□ -1.53
TRAFD1-207ENST00000550051 NDUFA12Q9UI09 145 aa5.48□□□□□ -1.53
TRAFD1-207ENST00000550051 PRYO14603 147 aa5.47□□□□□ -1.53
TRAFD1-207ENST00000550051 LINC00158P58513 81 aa5.47□□□□□ -1.53
TRAFD1-207ENST00000550051 SMCO4Q9NRQ5 59 aa5.47□□□□□ -1.53
TRAFD1-207ENST00000550051 A0A096LNJ9 63 aa5.46□□□□□ -1.54
TRAFD1-207ENST00000550051 SLC25A20O43772 301 aa5.46□□□□□ -1.54
TRAFD1-207ENST00000550051 NDUFA6P56556 154 aa5.46□□□□□ -1.54
TRAFD1-207ENST00000550051 COX19Q49B96 90 aa5.46□□□□□ -1.54
TRAFD1-207ENST00000550051 FAM19A2Q8N3H0 131 aa5.46□□□□□ -1.54
TRAFD1-207ENST00000550051 C11orf86A6NJI1 115 aa5.45□□□□□ -1.54
TRAFD1-207ENST00000550051 KRTAP19-2Q3LHN2 52 aa5.45□□□□□ -1.54
TRAFD1-207ENST00000550051 LINC00614P0C842 121 aa5.44□□□□□ -1.54
TRAFD1-207ENST00000550051 TMEM170BQ5T4T1 132 aa5.44□□□□□ -1.54
TRAFD1-207ENST00000550051 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
TRAFD1-207ENST00000550051 ETDCA0A1B0GVM5 59 aa5.43□□□□□ -1.54
TRAFD1-207ENST00000550051 S100PP25815 95 aa5.43□□□□□ -1.54
TRAFD1-207ENST00000550051 FABP9Q0Z7S8 132 aa5.43□□□□□ -1.54
TRAFD1-207ENST00000550051 GAGE2AQ6NT46 116 aa5.43□□□□□ -1.54
TRAFD1-207ENST00000550051 BAGE3Q86Y29 109 aa5.43□□□□□ -1.54
TRAFD1-207ENST00000550051 BOD1L2Q8IYS8 172 aa5.43□□□□□ -1.54
TRAFD1-207ENST00000550051 URB1-AS1Q96HZ7 61 aa5.43□□□□□ -1.54
TRAFD1-207ENST00000550051 A0A0U1RRA0 63 aa5.42□□□□□ -1.54
TRAFD1-207ENST00000550051 CFC1BP0CG36 223 aa5.42□□□□□ -1.54
TRAFD1-207ENST00000550051 MT1HP80294 61 aa5.42□□□□□ -1.54
TRAFD1-207ENST00000550051 MOBPQ13875 183 aa5.42□□□□□ -1.54
TRAFD1-207ENST00000550051 IGLV9-49A0A0B4J1Y8 123 aa5.41□□□□□ -1.54
TRAFD1-207ENST00000550051 TRBV10-3A0A0K0K1G6 114 aa5.41□□□□□ -1.54
TRAFD1-207ENST00000550051 TMEM223A0PJW6 202 aa5.41□□□□□ -1.54
TRAFD1-207ENST00000550051 LINC00587B1AMM8 73 aa5.41□□□□□ -1.54
TRAFD1-207ENST00000550051 ATP6V1G1O75348 118 aa5.41□□□□□ -1.54
TRAFD1-207ENST00000550051 ERC2-IT1O76042 136 aa5.41□□□□□ -1.54
TRAFD1-207ENST00000550051 HBDP02042 147 aa5.41□□□□□ -1.54
TRAFD1-207ENST00000550051 SMIM13P0DJ93 91 aa5.41□□□□□ -1.54
TRAFD1-207ENST00000550051 TMEM218A2RU14 115 aa5.4□□□□□ -1.54
TRAFD1-207ENST00000550051 HERV-K104P63124 156 aa5.4□□□□□ -1.54
TRAFD1-207ENST00000550051 S100A12P80511 92 aa5.4□□□□□ -1.54
TRAFD1-207ENST00000550051 UQCC3Q6UW78 93 aa5.4□□□□□ -1.54
TRAFD1-207ENST00000550051 MIR7-3HGQ8N6C7 128 aa5.4□□□□□ -1.54
TRAFD1-207ENST00000550051 SEC11CQ9BY50 192 aa5.4□□□□□ -1.54
TRAFD1-207ENST00000550051 CHTOPQ9Y3Y2 248 aaKnown RBP5.4□□□□□ -1.54
TRAFD1-207ENST00000550051 LOC107984156A0A0G2JMH3 177 aa5.39□□□□□ -1.55
TRAFD1-207ENST00000550051 NCR3O14931 201 aa5.39□□□□□ -1.55
TRAFD1-207ENST00000550051 CLLU1Q5K131 121 aa5.39□□□□□ -1.55
TRAFD1-207ENST00000550051 ARL17AQ8IVW1 177 aa5.39□□□□□ -1.55
TRAFD1-207ENST00000550051 C18orf32Q8TCD1 76 aa5.39□□□□□ -1.55
TRAFD1-207ENST00000550051 Q9BRP9 147 aa5.39□□□□□ -1.55
TRAFD1-207ENST00000550051 TRIAP1O43715 76 aa5.38□□□□□ -1.55
TRAFD1-207ENST00000550051 PMCHL1Q16048 86 aa5.38□□□□□ -1.55
TRAFD1-207ENST00000550051 TRAV12-1A0A0B4J245 112 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms