RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 C22orf24Q9Y442 160 aa4.51□□□□□ -1.69
PTCH1-219ENST00000549678 GAGE10A6NGK3 116 aa4.5□□□□□ -1.69
PTCH1-219ENST00000549678 LINC00587B1AMM8 73 aa4.5□□□□□ -1.69
PTCH1-219ENST00000549678 HERV-K104P63124 156 aa4.5□□□□□ -1.69
PTCH1-219ENST00000549678 PLEKHB2Q96CS7 222 aa4.5□□□□□ -1.69
PTCH1-219ENST00000549678 NDUFA12Q9UI09 145 aa4.5□□□□□ -1.69
PTCH1-219ENST00000549678 C20orf202A1L168 122 aa4.49□□□□□ -1.69
PTCH1-219ENST00000549678 RPL37AP8A6NKH3 93 aa4.49□□□□□ -1.69
PTCH1-219ENST00000549678 SYS1-DBNDD2H3BUS1 97 aa4.49□□□□□ -1.69
PTCH1-219ENST00000549678 LEPROTO15243 131 aa4.49□□□□□ -1.69
PTCH1-219ENST00000549678 IGLV7-43P04211 117 aa4.49□□□□□ -1.69
PTCH1-219ENST00000549678 KRTDAPP60985 99 aa4.49□□□□□ -1.69
PTCH1-219ENST00000549678 DIRC1Q969H9 104 aa4.49□□□□□ -1.69
PTCH1-219ENST00000549678 MIEN1Q9BRT3 115 aa4.49□□□□□ -1.69
PTCH1-219ENST00000549678 SND1-IT1Q9HBX3 110 aa4.49□□□□□ -1.69
PTCH1-219ENST00000549678 TP73-AS1Q9UF72 201 aa4.49□□□□□ -1.69
PTCH1-219ENST00000549678 J3QQQ9 107 aa4.48□□□□□ -1.69
PTCH1-219ENST00000549678 S100A6P06703 90 aa4.48□□□□□ -1.69
PTCH1-219ENST00000549678 SMIM13P0DJ93 91 aa4.48□□□□□ -1.69
PTCH1-219ENST00000549678 S100A2P29034 98 aa4.48□□□□□ -1.69
PTCH1-219ENST00000549678 IGKV2-28A0A075B6P5 120 aa4.47□□□□□ -1.69
PTCH1-219ENST00000549678 IGKV2D-28P01615 120 aa4.47□□□□□ -1.69
PTCH1-219ENST00000549678 MT1HL1P0DM35 61 aa4.47□□□□□ -1.69
PTCH1-219ENST00000549678 NMUP48645 174 aa4.47□□□□□ -1.69
PTCH1-219ENST00000549678 UBE2AP49459 152 aa4.47□□□□□ -1.69
PTCH1-219ENST00000549678 S100A12P80511 92 aa4.47□□□□□ -1.69
PTCH1-219ENST00000549678 PET117Q6UWS5 81 aa4.47□□□□□ -1.69
PTCH1-219ENST00000549678 KRTAP7-1Q8IUC3 87 aa4.47□□□□□ -1.69
PTCH1-219ENST00000549678 MIR7-3HGQ8N6C7 128 aa4.47□□□□□ -1.69
PTCH1-219ENST00000549678 LINC00167Q96N53 147 aa4.47□□□□□ -1.69
PTCH1-219ENST00000549678 C3orf79P0CE67 100 aa4.46□□□□□ -1.7
PTCH1-219ENST00000549678 RPL28P46779 137 aaKnown RBP4.46□□□□□ -1.7
PTCH1-219ENST00000549678 BOD1L2Q8IYS8 172 aa4.46□□□□□ -1.7
PTCH1-219ENST00000549678 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
PTCH1-219ENST00000549678 E9PLD3 99 aa4.45□□□□□ -1.7
PTCH1-219ENST00000549678 H0Y9J4 135 aa4.45□□□□□ -1.7
PTCH1-219ENST00000549678 NCR3O14931 201 aa4.45□□□□□ -1.7
PTCH1-219ENST00000549678 BCE1O60756 84 aa4.45□□□□□ -1.7
PTCH1-219ENST00000549678 VPREB1P12018 145 aa4.45□□□□□ -1.7
PTCH1-219ENST00000549678 TSPEAR-AS2P59090 65 aa4.45□□□□□ -1.7
PTCH1-219ENST00000549678 SRSF9Q13242 221 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTCH1-219ENST00000549678 COA6Q5JTJ3 125 aaKnown RBP4.45□□□□□ -1.7
PTCH1-219ENST00000549678 KRTAP11-1Q8IUC1 163 aa4.45□□□□□ -1.7
PTCH1-219ENST00000549678 LINC01600Q96MT4 127 aa4.45□□□□□ -1.7
PTCH1-219ENST00000549678 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
PTCH1-219ENST00000549678 ZNF861PO60384 105 aa4.44□□□□□ -1.7
PTCH1-219ENST00000549678 AKR1D1P51857 326 aa4.44□□□□□ -1.7
PTCH1-219ENST00000549678 NPC2P61916 151 aa4.44□□□□□ -1.7
PTCH1-219ENST00000549678 LINC01545Q5VT33 79 aa4.44□□□□□ -1.7
PTCH1-219ENST00000549678 FAM19A1Q7Z5A9 133 aa4.44□□□□□ -1.7
PTCH1-219ENST00000549678 DAND5Q8N907 189 aa4.44□□□□□ -1.7
PTCH1-219ENST00000549678 TMA7Q9Y2S6 64 aaKnown RBP4.44□□□□□ -1.7
PTCH1-219ENST00000549678 ZNF815PA8K554 130 aa4.43□□□□□ -1.7
PTCH1-219ENST00000549678 M0R378 163 aa4.43□□□□□ -1.7
PTCH1-219ENST00000549678 IGLV1-50A0A075B6I6 118 aa4.42□□□□□ -1.7
PTCH1-219ENST00000549678 A0A0J9YXY3 114 aa4.42□□□□□ -1.7
PTCH1-219ENST00000549678 HSBP1L1C9JCN9 74 aa4.42□□□□□ -1.7
PTCH1-219ENST00000549678 S100A7L2Q5SY68 101 aa4.42□□□□□ -1.7
PTCH1-219ENST00000549678 SCGB1D4Q6XE38 83 aa4.42□□□□□ -1.7
PTCH1-219ENST00000549678 ATOH7Q8N100 152 aa4.42□□□□□ -1.7
PTCH1-219ENST00000549678 TMEM126AQ9H061 195 aa4.42□□□□□ -1.7
PTCH1-219ENST00000549678 IGKV2D-26A0A0A0MRZ7 120 aa4.41□□□□□ -1.7
PTCH1-219ENST00000549678 ETDCA0A1B0GVM5 59 aa4.41□□□□□ -1.7
PTCH1-219ENST00000549678 TMEM238C9JI98 176 aa4.41□□□□□ -1.7
PTCH1-219ENST00000549678 PRYO14603 147 aa4.41□□□□□ -1.7
PTCH1-219ENST00000549678 PRLHP81277 87 aa4.41□□□□□ -1.7
PTCH1-219ENST00000549678 RPL13AP40429 203 aaKnown RBP4.4□□□□□ -1.71
PTCH1-219ENST00000549678 KRTAP10-8P60410 259 aa4.4□□□□□ -1.71
PTCH1-219ENST00000549678 HIST3H2BBQ8N257 126 aa4.4□□□□□ -1.71
PTCH1-219ENST00000549678 PRR26Q8N8Z3 221 aa4.4□□□□□ -1.71
PTCH1-219ENST00000549678 HIGD2AQ9BW72 106 aa4.4□□□□□ -1.71
PTCH1-219ENST00000549678 SPANXB1Q9NS25 103 aaPredicted RBP4.4□□□□□ -1.71
PTCH1-219ENST00000549678 DDTP30046 118 aa4.39□□□□□ -1.71
PTCH1-219ENST00000549678 Q8NDZ9 215 aa4.39□□□□□ -1.71
PTCH1-219ENST00000549678 OR13C6PQ8NH95 151 aa4.39□□□□□ -1.71
PTCH1-219ENST00000549678 COPS9Q8WXC6 57 aa4.39□□□□□ -1.71
PTCH1-219ENST00000549678 HIST1H2BLQ99880 126 aa4.39□□□□□ -1.71
PTCH1-219ENST00000549678 CBY1Q9Y3M2 126 aa4.39□□□□□ -1.71
PTCH1-219ENST00000549678 TRBV10-3A0A0K0K1G6 114 aa4.38□□□□□ -1.71
PTCH1-219ENST00000549678 TRBV10-2A0A0K0K1G8 114 aa4.38□□□□□ -1.71
PTCH1-219ENST00000549678 NDUFC2O95298 119 aa4.38□□□□□ -1.71
PTCH1-219ENST00000549678 SCGB1D1O95968 90 aa4.38□□□□□ -1.71
PTCH1-219ENST00000549678 HINT1P49773 126 aaPredicted RBP4.38□□□□□ -1.71
PTCH1-219ENST00000549678 SNRPEP62304 92 aaKnown RBP4.38□□□□□ -1.71
PTCH1-219ENST00000549678 ANKRD39Q53RE8 183 aa4.38□□□□□ -1.71
PTCH1-219ENST00000549678 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
PTCH1-219ENST00000549678 TIMM17BO60830 172 aa4.37□□□□□ -1.71
PTCH1-219ENST00000549678 CRYGAP11844 174 aa4.37□□□□□ -1.71
PTCH1-219ENST00000549678 ADAMTSL4-AS1Q5T5F5 129 aa4.37□□□□□ -1.71
PTCH1-219ENST00000549678 SPANXCQ9NY87 97 aa4.37□□□□□ -1.71
PTCH1-219ENST00000549678 ZNF706Q9Y5V0 76 aaPredicted RBP4.37□□□□□ -1.71
PTCH1-219ENST00000549678 TRAV23DV6A0A075B6W5 121 aa4.36□□□□□ -1.71
PTCH1-219ENST00000549678 LOC107984156A0A0G2JMH3 177 aa4.36□□□□□ -1.71
PTCH1-219ENST00000549678 ARL17AQ8IVW1 177 aa4.36□□□□□ -1.71
PTCH1-219ENST00000549678 LINC00337Q8N6G1 96 aa4.36□□□□□ -1.71
PTCH1-219ENST00000549678 TYMSOSQ8TAI1 123 aa4.36□□□□□ -1.71
PTCH1-219ENST00000549678 LINC00308Q8TCZ7 52 aa4.36□□□□□ -1.71
PTCH1-219ENST00000549678 LPAP08519 4548 aa4.35□□□□□ -1.71
PTCH1-219ENST00000549678 KRTAP1-4P0C5Y4 121 aa4.35□□□□□ -1.71
PTCH1-219ENST00000549678 JOSD1Q15040 202 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms