RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 LINC00269Q8N2A0 174 aa9.4□□□□□ -0.91
HDAC7-228ENST00000548938 Q8N3U1 123 aa9.4□□□□□ -0.91
HDAC7-228ENST00000548938 INAFM1C9JVW0 142 aa9.38□□□□□ -0.91
HDAC7-228ENST00000548938 COX17Q14061 63 aa9.38□□□□□ -0.91
HDAC7-228ENST00000548938 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
HDAC7-228ENST00000548938 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
HDAC7-228ENST00000548938 C20orf197Q8N268 126 aa9.37□□□□□ -0.91
HDAC7-228ENST00000548938 CHCHD10Q8WYQ3 142 aaPredicted RBP9.37□□□□□ -0.91
HDAC7-228ENST00000548938 M0R2N4 97 aa9.37□□□□□ -0.91
HDAC7-228ENST00000548938 Q6ZQT0 140 aa9.37□□□□□ -0.91
HDAC7-228ENST00000548938 LINC00612Q8N6U2 182 aa9.37□□□□□ -0.91
HDAC7-228ENST00000548938 TRBV10-3A0A0K0K1G6 114 aa9.35□□□□□ -0.91
HDAC7-228ENST00000548938 IGHV4-28A0A0C4DH34 117 aa9.35□□□□□ -0.91
HDAC7-228ENST00000548938 RBM3P98179 157 aaKnown RBP9.35□□□□□ -0.91
HDAC7-228ENST00000548938 SPATA3Q8NHX4 192 aa9.35□□□□□ -0.91
HDAC7-228ENST00000548938 PRO0255Q9UI72 69 aa9.35□□□□□ -0.91
HDAC7-228ENST00000548938 ANGP03950 147 aaKnown RBP9.34□□□□□ -0.91
HDAC7-228ENST00000548938 C10orf25Q5T742 122 aa9.34□□□□□ -0.91
HDAC7-228ENST00000548938 LAMTOR3Q9UHA4 124 aa9.34□□□□□ -0.91
HDAC7-228ENST00000548938 ZNF561-AS1K7EIQ3 104 aa9.33□□□□□ -0.92
HDAC7-228ENST00000548938 KRTAP10-3P60369 221 aa9.33□□□□□ -0.92
HDAC7-228ENST00000548938 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
HDAC7-228ENST00000548938 REG3AQ06141 175 aa9.33□□□□□ -0.92
HDAC7-228ENST00000548938 C6orf223Q8N319 242 aa9.33□□□□□ -0.92
HDAC7-228ENST00000548938 Q5XG85 94 aa9.33□□□□□ -0.92
HDAC7-228ENST00000548938 HRCT1Q6UXD1 115 aa9.33□□□□□ -0.92
HDAC7-228ENST00000548938 X6R8D5 127 aa9.32□□□□□ -0.92
HDAC7-228ENST00000548938 LOC110117498A0A087WWA1 95 aa9.32□□□□□ -0.92
HDAC7-228ENST00000548938 NDUFC2-KCTD14E9PQ53 114 aa9.32□□□□□ -0.92
HDAC7-228ENST00000548938 LINC01547P58512 204 aaPredicted RBP9.32□□□□□ -0.92
HDAC7-228ENST00000548938 UNQ6190/PRO20217Q6UXQ8 127 aa9.32□□□□□ -0.92
HDAC7-228ENST00000548938 HAMPP81172 84 aa9.31□□□□□ -0.92
HDAC7-228ENST00000548938 Q6ZQY7 126 aa9.3□□□□□ -0.92
HDAC7-228ENST00000548938 Q6ZVQ6 151 aa9.3□□□□□ -0.92
HDAC7-228ENST00000548938 SEC61GP60059 68 aa9.3□□□□□ -0.92
HDAC7-228ENST00000548938 DEFB4AO15263 64 aa9.29□□□□□ -0.92
HDAC7-228ENST00000548938 SPAG11BQ08648 103 aa9.29□□□□□ -0.92
HDAC7-228ENST00000548938 F8P00451 2351 aa9.29□□□□□ -0.92
HDAC7-228ENST00000548938 FAM236DA0A1B0GTK5 79 aa9.29□□□□□ -0.92
HDAC7-228ENST00000548938 FAM236CP0DP71 79 aa9.29□□□□□ -0.92
HDAC7-228ENST00000548938 LINC00482Q8N8I6 264 aa9.28□□□□□ -0.92
HDAC7-228ENST00000548938 TRAV7A0A075B6U4 112 aa9.28□□□□□ -0.92
HDAC7-228ENST00000548938 TRAV10A0A0B4J240 114 aa9.28□□□□□ -0.92
HDAC7-228ENST00000548938 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
HDAC7-228ENST00000548938 H7BZZ5 65 aa9.27□□□□□ -0.92
HDAC7-228ENST00000548938 TENM1Q9UKZ4 2725 aa9.27□□□□□ -0.93
HDAC7-228ENST00000548938 PRO0628Q9UI54 55 aa9.27□□□□□ -0.93
HDAC7-228ENST00000548938 VWFP04275 2813 aa9.26□□□□□ -0.93
HDAC7-228ENST00000548938 CYSRT1A8MQ03 144 aa9.26□□□□□ -0.93
HDAC7-228ENST00000548938 ATRQ13535 2644 aa9.26□□□□□ -0.93
HDAC7-228ENST00000548938 SNURFQ9Y675 71 aa9.25□□□□□ -0.93
HDAC7-228ENST00000548938 C9orf66Q5T8R8 295 aa9.24□□□□□ -0.93
HDAC7-228ENST00000548938 MUC7Q8TAX7 377 aa9.24□□□□□ -0.93
HDAC7-228ENST00000548938 A0A0J9YWU9 116 aa9.24□□□□□ -0.93
HDAC7-228ENST00000548938 IGHV4-30-4P0DP06 118 aa9.24□□□□□ -0.93
HDAC7-228ENST00000548938 SCXQ7RTU7 201 aa9.24□□□□□ -0.93
HDAC7-228ENST00000548938 BCE1O60756 84 aa9.23□□□□□ -0.93
HDAC7-228ENST00000548938 XAGE1AQ9HD64 81 aa9.23□□□□□ -0.93
HDAC7-228ENST00000548938 LYRM9A8MSI8 78 aa9.23□□□□□ -0.93
HDAC7-228ENST00000548938 RMI2Q96E14 147 aa9.23□□□□□ -0.93
HDAC7-228ENST00000548938 KLKP1Q107X0 134 aa9.22□□□□□ -0.93
HDAC7-228ENST00000548938 DEFB135Q30KP9 77 aa9.22□□□□□ -0.93
HDAC7-228ENST00000548938 CXCL6P80162 114 aa9.22□□□□□ -0.93
HDAC7-228ENST00000548938 DIRC1Q969H9 104 aa9.22□□□□□ -0.93
HDAC7-228ENST00000548938 C1orf43Q9BWL3 253 aa9.21□□□□□ -0.93
HDAC7-228ENST00000548938 PDE6GP18545 87 aa9.21□□□□□ -0.94
HDAC7-228ENST00000548938 TEP1Q99973 2627 aaKnown RBP9.21□□□□□ -0.94
HDAC7-228ENST00000548938 EPM2AB3EWF7 344 aa9.2□□□□□ -0.94
HDAC7-228ENST00000548938 KLK12Q9UKR0 248 aa9.2□□□□□ -0.94
HDAC7-228ENST00000548938 TRBV7-4A0A0J9YYF1 115 aa9.2□□□□□ -0.94
HDAC7-228ENST00000548938 DAD1P61803 113 aa9.2□□□□□ -0.94
HDAC7-228ENST00000548938 C6orf48Q9UBA6 75 aa9.2□□□□□ -0.94
HDAC7-228ENST00000548938 SERP1Q9Y6X1 66 aa9.2□□□□□ -0.94
HDAC7-228ENST00000548938 CELA1Q9UNI1 258 aa9.19□□□□□ -0.94
HDAC7-228ENST00000548938 TM2D3Q9BRN9 247 aa9.19□□□□□ -0.94
HDAC7-228ENST00000548938 F8WEM9 126 aa9.18□□□□□ -0.94
HDAC7-228ENST00000548938 ZNF73O43830 326 aaPredicted RBP9.18□□□□□ -0.94
HDAC7-228ENST00000548938 HTN3P15516 51 aa9.18□□□□□ -0.94
HDAC7-228ENST00000548938 COX7BP24311 80 aa9.18□□□□□ -0.94
HDAC7-228ENST00000548938 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.17□□□□□ -0.94
HDAC7-228ENST00000548938 H3BQ85 93 aa9.17□□□□□ -0.94
HDAC7-228ENST00000548938 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
HDAC7-228ENST00000548938 V9GYY9 64 aa9.17□□□□□ -0.94
HDAC7-228ENST00000548938 GVQW2A0A096LPI5 108 aaPredicted RBP9.16□□□□□ -0.94
HDAC7-228ENST00000548938 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
HDAC7-228ENST00000548938 LELP1Q5T871 98 aa9.16□□□□□ -0.94
HDAC7-228ENST00000548938 TRRAPQ9Y4A5 3859 aa9.16□□□□□ -0.94
HDAC7-228ENST00000548938 LINC00336Q6ZUF6 198 aa9.16□□□□□ -0.94
HDAC7-228ENST00000548938 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
HDAC7-228ENST00000548938 BAHCC1Q9P281 2608 aa9.14□□□□□ -0.95
HDAC7-228ENST00000548938 HIGD2BQ4VC39 106 aa9.13□□□□□ -0.95
HDAC7-228ENST00000548938 Q8N9L7 120 aa9.13□□□□□ -0.95
HDAC7-228ENST00000548938 TRBV7-6A0A0J9YX20 115 aa9.12□□□□□ -0.95
HDAC7-228ENST00000548938 VPREB1P12018 145 aa9.12□□□□□ -0.95
HDAC7-228ENST00000548938 NREPQ16612 68 aa9.12□□□□□ -0.95
HDAC7-228ENST00000548938 Q8NAQ8 132 aa9.12□□□□□ -0.95
HDAC7-228ENST00000548938 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
HDAC7-228ENST00000548938 BPY2O14599 106 aa9.1□□□□□ -0.95
HDAC7-228ENST00000548938 MIFP14174 115 aa9.1□□□□□ -0.95
HDAC7-228ENST00000548938 CAMK2N2Q96S95 79 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms