RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 SVBPQ8N300 66 aa7.23□□□□□ -1.25
GCN1-204ENST00000548132 TYMSOSQ8TAI1 123 aa7.23□□□□□ -1.25
GCN1-204ENST00000548132 TRAV12-1A0A0B4J245 112 aa7.22□□□□□ -1.25
GCN1-204ENST00000548132 SNAPINO95295 136 aa7.22□□□□□ -1.25
GCN1-204ENST00000548132 CBLN2Q8IUK8 224 aa7.22□□□□□ -1.25
GCN1-204ENST00000548132 CHTOPQ9Y3Y2 248 aaKnown RBP7.22□□□□□ -1.25
GCN1-204ENST00000548132 TSPEAR-AS2P59090 65 aa7.21□□□□□ -1.26
GCN1-204ENST00000548132 RETNLBQ9BQ08 111 aa7.21□□□□□ -1.26
GCN1-204ENST00000548132 FAM19A1Q7Z5A9 133 aa7.2□□□□□ -1.26
GCN1-204ENST00000548132 C3orf22Q8N5N4 141 aa7.2□□□□□ -1.26
GCN1-204ENST00000548132 IFI27L1Q96BM0 104 aa7.2□□□□□ -1.26
GCN1-204ENST00000548132 CHCHD1Q96BP2 118 aaKnown RBP7.2□□□□□ -1.26
GCN1-204ENST00000548132 SFTA2Q6UW10 78 aa7.19□□□□□ -1.26
GCN1-204ENST00000548132 LINC00304Q8N9R0 145 aa7.19□□□□□ -1.26
GCN1-204ENST00000548132 FAT4Q6V0I7 4981 aa7.18□□□□□ -1.26
GCN1-204ENST00000548132 A0A0U1RRA0 63 aa7.18□□□□□ -1.26
GCN1-204ENST00000548132 KRTAP4-16G5E9R7 235 aaPredicted RBP7.18□□□□□ -1.26
GCN1-204ENST00000548132 FAM19A2Q8N3H0 131 aa7.18□□□□□ -1.26
GCN1-204ENST00000548132 PLEKHB2Q96CS7 222 aa7.18□□□□□ -1.26
GCN1-204ENST00000548132 SMIM13P0DJ93 91 aa7.17□□□□□ -1.26
GCN1-204ENST00000548132 SPRR1AP35321 89 aa7.17□□□□□ -1.26
GCN1-204ENST00000548132 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
GCN1-204ENST00000548132 NDUFA5Q16718 116 aa7.16□□□□□ -1.26
GCN1-204ENST00000548132 MIR7-3HGQ8N6C7 128 aa7.16□□□□□ -1.26
GCN1-204ENST00000548132 SPRR4Q96PI1 79 aa7.16□□□□□ -1.26
GCN1-204ENST00000548132 NCR3O14931 201 aa7.15□□□□□ -1.26
GCN1-204ENST00000548132 LINC00158P58513 81 aa7.15□□□□□ -1.26
GCN1-204ENST00000548132 HIGD2AQ9BW72 106 aa7.15□□□□□ -1.26
GCN1-204ENST00000548132 PRYO14603 147 aa7.14□□□□□ -1.27
GCN1-204ENST00000548132 SERF1AO75920 110 aa7.14□□□□□ -1.27
GCN1-204ENST00000548132 TRGC2P03986 189 aa7.13□□□□□ -1.27
GCN1-204ENST00000548132 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
GCN1-204ENST00000548132 BOD1L2Q8IYS8 172 aa7.13□□□□□ -1.27
GCN1-204ENST00000548132 NDUFA12Q9UI09 145 aa7.13□□□□□ -1.27
GCN1-204ENST00000548132 IGKV2D-26A0A0A0MRZ7 120 aa7.12□□□□□ -1.27
GCN1-204ENST00000548132 TRBV10-3A0A0K0K1G6 114 aa7.12□□□□□ -1.27
GCN1-204ENST00000548132 HSBP1O75506 76 aa7.12□□□□□ -1.27
GCN1-204ENST00000548132 SMCR5Q8TEV8 140 aa7.12□□□□□ -1.27
GCN1-204ENST00000548132 KCNQ1DNQ9H478 68 aa7.12□□□□□ -1.27
GCN1-204ENST00000548132 MEIG1Q5JSS6 88 aa7.11□□□□□ -1.27
GCN1-204ENST00000548132 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
GCN1-204ENST00000548132 LINC00337Q8N6G1 96 aa7.11□□□□□ -1.27
GCN1-204ENST00000548132 DAND5Q8N907 189 aa7.11□□□□□ -1.27
GCN1-204ENST00000548132 H0Y8G0 127 aa7.1□□□□□ -1.27
GCN1-204ENST00000548132 HERV-K104P63124 156 aa7.1□□□□□ -1.27
GCN1-204ENST00000548132 LOC107984156A0A0G2JMH3 177 aa7.09□□□□□ -1.27
GCN1-204ENST00000548132 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
GCN1-204ENST00000548132 LINC00483Q53H64 154 aa7.09□□□□□ -1.27
GCN1-204ENST00000548132 ARL17AQ8IVW1 177 aa7.09□□□□□ -1.27
GCN1-204ENST00000548132 PMCHL2Q9BQD1 86 aa7.09□□□□□ -1.27
GCN1-204ENST00000548132 LEPROTO15243 131 aa7.08□□□□□ -1.28
GCN1-204ENST00000548132 ERC2-IT1O76042 136 aa7.08□□□□□ -1.28
GCN1-204ENST00000548132 LEPROTL1O95214 131 aa7.08□□□□□ -1.28
GCN1-204ENST00000548132 SOSTDC1Q6X4U4 206 aa7.08□□□□□ -1.28
GCN1-204ENST00000548132 CTAG1AP78358 180 aa7.07□□□□□ -1.28
GCN1-204ENST00000548132 Q9BRP9 147 aa7.07□□□□□ -1.28
GCN1-204ENST00000548132 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
GCN1-204ENST00000548132 MYMXA0A1B0GTQ4 84 aa7.06□□□□□ -1.28
GCN1-204ENST00000548132 COLCA2A8K830 154 aa7.06□□□□□ -1.28
GCN1-204ENST00000548132 B5MCH6 92 aa7.06□□□□□ -1.28
GCN1-204ENST00000548132 J3QQQ9 107 aa7.06□□□□□ -1.28
GCN1-204ENST00000548132 PLNP26678 52 aa7.06□□□□□ -1.28
GCN1-204ENST00000548132 Q8NBF4 154 aa7.06□□□□□ -1.28
GCN1-204ENST00000548132 PPDPFQ9H3Y8 114 aa7.06□□□□□ -1.28
GCN1-204ENST00000548132 ZNF706Q9Y5V0 76 aaPredicted RBP7.05□□□□□ -1.28
GCN1-204ENST00000548132 TRBV10-2A0A0K0K1G8 114 aa7.04□□□□□ -1.28
GCN1-204ENST00000548132 DPM2O94777 84 aa7.04□□□□□ -1.28
GCN1-204ENST00000548132 IGLV6-57P01721 117 aa7.04□□□□□ -1.28
GCN1-204ENST00000548132 FABP4P15090 132 aa7.04□□□□□ -1.28
GCN1-204ENST00000548132 SLC7A5P1Q8MH63 180 aa7.04□□□□□ -1.28
GCN1-204ENST00000548132 ETDCA0A1B0GVM5 59 aa7.03□□□□□ -1.28
GCN1-204ENST00000548132 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
GCN1-204ENST00000548132 ADAMTSL4-AS1Q5T5F5 129 aa7.03□□□□□ -1.28
GCN1-204ENST00000548132 Q6ZRX8 168 aa7.03□□□□□ -1.28
GCN1-204ENST00000548132 SPANXB1Q9NS25 103 aaPredicted RBP7.03□□□□□ -1.28
GCN1-204ENST00000548132 ATP6V1G1O75348 118 aa7.02□□□□□ -1.29
GCN1-204ENST00000548132 IGKCP01834 107 aa7.02□□□□□ -1.29
GCN1-204ENST00000548132 DDTP30046 118 aa7.02□□□□□ -1.29
GCN1-204ENST00000548132 NMUP48645 174 aa7.02□□□□□ -1.29
GCN1-204ENST00000548132 LITAFQ99732 161 aa7.02□□□□□ -1.29
GCN1-204ENST00000548132 MAP1LC3CQ9BXW4 147 aa7.02□□□□□ -1.29
GCN1-204ENST00000548132 A0A0J9YXY3 114 aa7.01□□□□□ -1.29
GCN1-204ENST00000548132 LINC00587B1AMM8 73 aa7.01□□□□□ -1.29
GCN1-204ENST00000548132 SPAG11AQ6PDA7 123 aa7.01□□□□□ -1.29
GCN1-204ENST00000548132 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
GCN1-204ENST00000548132 HSPB8Q9UJY1 196 aa7.01□□□□□ -1.29
GCN1-204ENST00000548132 E9PLD3 99 aa7□□□□□ -1.29
GCN1-204ENST00000548132 NDUFC2O95298 119 aa7□□□□□ -1.29
GCN1-204ENST00000548132 MOBPQ13875 183 aa7□□□□□ -1.29
GCN1-204ENST00000548132 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
GCN1-204ENST00000548132 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
GCN1-204ENST00000548132 HERVK_113P61574 105 aa6.99□□□□□ -1.29
GCN1-204ENST00000548132 NPC2P61916 151 aa6.99□□□□□ -1.29
GCN1-204ENST00000548132 GAGE2AQ6NT46 116 aa6.99□□□□□ -1.29
GCN1-204ENST00000548132 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
GCN1-204ENST00000548132 TRAV23DV6A0A075B6W5 121 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 A0A0U1RQV1 116 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms