RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 Q6ZUT4 128 aa0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 STX12Q86Y82 276 aa0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 KRTAP8-1Q8IUC2 63 aa0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 MCFD2Q8NI22 146 aa0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 SMCR5Q8TEV8 140 aa0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 SMIM4Q8WVI0 70 aa0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 BLOC1S6Q9UL45 172 aa0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 CSDC2Q9Y534 153 aaKnown RBP0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 TGIF2-C20orf24A0A0A6YYL0 155 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 A0A0G2JQZ4 141 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 A0A1W2PPV4 95 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 C7orf77A4D0Y5 90 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 LTAP01374 205 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 TRGC1P0CF51 173 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 IGLC6P0CF74 106 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 PVALBP20472 110 aaPredicted RBP0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 GCHFRP30047 84 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 AQP4P55087 323 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 DEFA1P59665 94 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 CKS1BP61024 79 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 LSM3P62310 102 aaKnown RBP0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 IL15RAQ13261 267 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 C6orf226Q5I0X4 101 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 C10orf91Q5T1B1 145 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 C9orf153Q5TBE3 101 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 C1orf195Q5TG92 126 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 Q5VV11 94 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 HRCT1Q6UXD1 115 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 AKAP14Q86UN6 197 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 FMC1Q96HJ9 113 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 FAM210AQ96ND0 272 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 RNASE7Q9H1E1 156 aaKnown RBP0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 TMEM167BQ9NRX6 74 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 MED9Q9NWA0 146 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 RBM12B-AS1Q9P1G2 102 aa0.92□□□□□ -2.26
DEPDC4-204ENST00000547823 LOC107984156A0A0G2JMH3 177 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 TRBV6-5A0A0K0K1A5 114 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 A0A1W2PRE2 83 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 PCP4L1A6NKN8 68 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 FAM25EA8MYX2 175 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 F8VRH5 84 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 PPP1R2P9O14990 202 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 IFNA1P01562 189 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 STAG3L2P0CL84 134 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 STAG3L3P0CL85 134 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 HRES1P13985 223 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 FAUP35544 74 aaKnown RBP0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 CDC34P49427 236 aaPredicted RBP0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 UBE2G1P62253 170 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 SMAGPQ0VAQ4 97 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 KRTAP19-8Q3LI54 63 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 ARL17AQ8IVW1 177 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 SPANXA2-OT1Q8N9U9 137 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 HIST1H2BAQ96A08 127 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 CNBD2Q96M20 576 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 TIMM21Q9BVV7 248 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 VCX2Q9H322 139 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 TOMM7Q9P0U1 55 aa0.91□□□□□ -2.26
DEPDC4-204ENST00000547823 TRBV27A0A0K0K1C4 114 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 F2Z2F3 143 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 INMT-MINDY4F8WBC2 141 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 ERC2-IT1O76042 136 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 CXorf1O96002 111 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 FCER1GP30273 86 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 POLR2KP53803 58 aaKnown RBP0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 VBP1P61758 197 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 HBBP68871 147 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 NEDD8Q15843 81 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 Q5XG85 94 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 SPINT4Q6UDR6 99 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 TEX261Q6UWH6 196 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 Q8IZM0 81 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 Q8NDZ9 215 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 SCGB1C1Q8TD33 95 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 NKX6-2Q9C056 277 aaPredicted RBP0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 ST20Q9HBF5 79 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 C8orf17Q9NRJ1 99 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 CBY1Q9Y3M2 126 aa0.9□□□□□ -2.27
DEPDC4-204ENST00000547823 H7C2G1 150 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 RGS5O15539 181 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 NDUFB6O95139 128 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 SPRR1AP35321 89 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 AKR1C3P42330 323 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 AP3S2P59780 193 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 RAB5BP61020 215 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 RPL39P62891 51 aaKnown RBP0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 MRPS36P82909 103 aaKnown RBP0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 CD164Q04900 197 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 BAGE2Q86Y30 109 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 C1orf64Q8NEQ6 169 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 OBSCN-AS1Q96MR7 158 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 CNFNQ9BYD5 112 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 IMUPQ9GZP8 106 aa0.89□□□□□ -2.27
DEPDC4-204ENST00000547823 ETDCA0A1B0GVM5 59 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 A8MWL6 223 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 SIX6O95475 246 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 S100A9P06702 114 aaKnown RBP0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 ATP6V0CP27449 155 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 RAB14P61106 215 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 RBM3P98179 157 aaKnown RBP0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms