RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 C10orf91Q5T1B1 145 aa4.65□□□□□ -1.67
PTCH1-214ENST00000547615 UQCC3Q6UW78 93 aa4.65□□□□□ -1.67
PTCH1-214ENST00000547615 SPRR4Q96PI1 79 aa4.65□□□□□ -1.67
PTCH1-214ENST00000547615 HIGD2AQ9BW72 106 aa4.65□□□□□ -1.67
PTCH1-214ENST00000547615 IGLV5-45A0A087WSX0 123 aa4.64□□□□□ -1.67
PTCH1-214ENST00000547615 SLC25A20O43772 301 aa4.64□□□□□ -1.67
PTCH1-214ENST00000547615 ALKAL2Q6UX46 152 aa4.64□□□□□ -1.67
PTCH1-214ENST00000547615 C3orf22Q8N5N4 141 aa4.64□□□□□ -1.67
PTCH1-214ENST00000547615 LOC389332A0A1B0GUA5 103 aa4.63□□□□□ -1.67
PTCH1-214ENST00000547615 M0R378 163 aa4.63□□□□□ -1.67
PTCH1-214ENST00000547615 XP32Q5T750 250 aa4.63□□□□□ -1.67
PTCH1-214ENST00000547615 ERASQ7Z444 233 aa4.63□□□□□ -1.67
PTCH1-214ENST00000547615 Q8NBF4 154 aa4.63□□□□□ -1.67
PTCH1-214ENST00000547615 C12orf57Q99622 126 aa4.63□□□□□ -1.67
PTCH1-214ENST00000547615 SMIM6P0DI80 62 aa4.62□□□□□ -1.67
PTCH1-214ENST00000547615 VPREB1P12018 145 aa4.62□□□□□ -1.67
PTCH1-214ENST00000547615 RAB5BP61020 215 aa4.62□□□□□ -1.67
PTCH1-214ENST00000547615 PEA15Q15121 130 aa4.62□□□□□ -1.67
PTCH1-214ENST00000547615 SSBP3-AS1Q7Z2R9 100 aa4.62□□□□□ -1.67
PTCH1-214ENST00000547615 TOMM6Q96B49 74 aa4.62□□□□□ -1.67
PTCH1-214ENST00000547615 PRYO14603 147 aa4.61□□□□□ -1.67
PTCH1-214ENST00000547615 S100PP25815 95 aa4.61□□□□□ -1.67
PTCH1-214ENST00000547615 PCP4L1A6NKN8 68 aa4.6□□□□□ -1.67
PTCH1-214ENST00000547615 TMEM238C9JI98 176 aa4.6□□□□□ -1.67
PTCH1-214ENST00000547615 PFN2P35080 140 aa4.6□□□□□ -1.67
PTCH1-214ENST00000547615 SVBPQ8N300 66 aa4.6□□□□□ -1.67
PTCH1-214ENST00000547615 SCGB3A1Q96QR1 104 aa4.6□□□□□ -1.67
PTCH1-214ENST00000547615 SND1-IT1Q9HBX3 110 aa4.6□□□□□ -1.67
PTCH1-214ENST00000547615 ERG28Q9UKR5 140 aa4.6□□□□□ -1.67
PTCH1-214ENST00000547615 TMEM218A2RU14 115 aa4.59□□□□□ -1.67
PTCH1-214ENST00000547615 C5orf52A6NGY3 159 aa4.59□□□□□ -1.67
PTCH1-214ENST00000547615 PMVKQ15126 192 aa4.59□□□□□ -1.67
PTCH1-214ENST00000547615 ZC2HC1BQ5TFG8 222 aa4.59□□□□□ -1.67
PTCH1-214ENST00000547615 LINC00587B1AMM8 73 aa4.58□□□□□ -1.68
PTCH1-214ENST00000547615 APOC3P02656 99 aa4.58□□□□□ -1.68
PTCH1-214ENST00000547615 SPINK8P0C7L1 97 aa4.58□□□□□ -1.68
PTCH1-214ENST00000547615 LINC00483Q53H64 154 aa4.58□□□□□ -1.68
PTCH1-214ENST00000547615 FA2HQ7L5A8 372 aa4.58□□□□□ -1.68
PTCH1-214ENST00000547615 Q8N377 158 aa4.58□□□□□ -1.68
PTCH1-214ENST00000547615 ANAPC16Q96DE5 110 aa4.58□□□□□ -1.68
PTCH1-214ENST00000547615 SEC11CQ9BY50 192 aa4.58□□□□□ -1.68
PTCH1-214ENST00000547615 ETDCA0A1B0GVM5 59 aa4.57□□□□□ -1.68
PTCH1-214ENST00000547615 EIF4EBP3O60516 100 aaPredicted RBP4.57□□□□□ -1.68
PTCH1-214ENST00000547615 MT1HP80294 61 aa4.57□□□□□ -1.68
PTCH1-214ENST00000547615 LIMD2Q9BT23 127 aa4.57□□□□□ -1.68
PTCH1-214ENST00000547615 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
PTCH1-214ENST00000547615 IGLV5-39A0A0G2JS06 123 aa4.56□□□□□ -1.68
PTCH1-214ENST00000547615 COLCA2A8K830 154 aa4.56□□□□□ -1.68
PTCH1-214ENST00000547615 M0R2T5 61 aa4.56□□□□□ -1.68
PTCH1-214ENST00000547615 MT-ND4LP03901 98 aa4.56□□□□□ -1.68
PTCH1-214ENST00000547615 CST9LQ9H4G1 147 aa4.56□□□□□ -1.68
PTCH1-214ENST00000547615 SPRR1AP35321 89 aa4.55□□□□□ -1.68
PTCH1-214ENST00000547615 AKR1D1P51857 326 aa4.55□□□□□ -1.68
PTCH1-214ENST00000547615 KCNQ1DNQ9H478 68 aa4.55□□□□□ -1.68
PTCH1-214ENST00000547615 IGLV8-61A0A075B6I0 122 aa4.54□□□□□ -1.68
PTCH1-214ENST00000547615 IGLC3P0DOY3 106 aa4.54□□□□□ -1.68
PTCH1-214ENST00000547615 ADCYAP1P18509 176 aa4.54□□□□□ -1.68
PTCH1-214ENST00000547615 MOBPQ13875 183 aa4.54□□□□□ -1.68
PTCH1-214ENST00000547615 SMCR5Q8TEV8 140 aa4.54□□□□□ -1.68
PTCH1-214ENST00000547615 SMCO4Q9NRQ5 59 aa4.54□□□□□ -1.68
PTCH1-214ENST00000547615 TRAV9-1A0A075B6T8 112 aa4.53□□□□□ -1.68
PTCH1-214ENST00000547615 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
PTCH1-214ENST00000547615 KRTAP10-6P60371 365 aaPredicted RBP4.53□□□□□ -1.68
PTCH1-214ENST00000547615 JOSD1Q15040 202 aaPredicted RBP4.53□□□□□ -1.68
PTCH1-214ENST00000547615 GAGE2AQ6NT46 116 aa4.53□□□□□ -1.68
PTCH1-214ENST00000547615 LINC01546A6NGU7 62 aa4.52□□□□□ -1.69
PTCH1-214ENST00000547615 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
PTCH1-214ENST00000547615 LINC00158P58513 81 aa4.52□□□□□ -1.69
PTCH1-214ENST00000547615 SNRPEP62304 92 aaKnown RBP4.52□□□□□ -1.69
PTCH1-214ENST00000547615 COX19Q49B96 90 aa4.52□□□□□ -1.69
PTCH1-214ENST00000547615 SLC25A34Q6PIV7 304 aa4.52□□□□□ -1.69
PTCH1-214ENST00000547615 COX6B2Q6YFQ2 88 aa4.52□□□□□ -1.69
PTCH1-214ENST00000547615 MAP1LC3CQ9BXW4 147 aa4.52□□□□□ -1.69
PTCH1-214ENST00000547615 CBY1Q9Y3M2 126 aa4.52□□□□□ -1.69
PTCH1-214ENST00000547615 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
PTCH1-214ENST00000547615 C9orf153Q5TBE3 101 aa4.51□□□□□ -1.69
PTCH1-214ENST00000547615 KRTAP4-16G5E9R7 235 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-214ENST00000547615 HERV-K104P63124 156 aa4.5□□□□□ -1.69
PTCH1-214ENST00000547615 PCOTHQ58A44 107 aa4.5□□□□□ -1.69
PTCH1-214ENST00000547615 BOD1L2Q8IYS8 172 aa4.5□□□□□ -1.69
PTCH1-214ENST00000547615 ZNF625Q96I27 306 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-214ENST00000547615 C9JQL5 133 aa4.49□□□□□ -1.69
PTCH1-214ENST00000547615 ZNF22P17026 224 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-214ENST00000547615 RHEBQ15382 184 aa4.49□□□□□ -1.69
PTCH1-214ENST00000547615 TMEM170BQ5T4T1 132 aa4.49□□□□□ -1.69
PTCH1-214ENST00000547615 Q6ZRX8 168 aa4.49□□□□□ -1.69
PTCH1-214ENST00000547615 YPEL4Q96NS1 127 aa4.49□□□□□ -1.69
PTCH1-214ENST00000547615 TRBV10-2A0A0K0K1G8 114 aa4.48□□□□□ -1.69
PTCH1-214ENST00000547615 CFC1P0CG37 223 aa4.48□□□□□ -1.69
PTCH1-214ENST00000547615 NDUFA6P56556 154 aa4.48□□□□□ -1.69
PTCH1-214ENST00000547615 FABP9Q0Z7S8 132 aa4.48□□□□□ -1.69
PTCH1-214ENST00000547615 ANKRD39Q53RE8 183 aa4.48□□□□□ -1.69
PTCH1-214ENST00000547615 MEIG1Q5JSS6 88 aa4.48□□□□□ -1.69
PTCH1-214ENST00000547615 C14orf144Q96I85 54 aa4.48□□□□□ -1.69
PTCH1-214ENST00000547615 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-214ENST00000547615 B5MCH6 92 aa4.47□□□□□ -1.69
PTCH1-214ENST00000547615 NCR3O14931 201 aa4.47□□□□□ -1.69
PTCH1-214ENST00000547615 HINT1P49773 126 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-214ENST00000547615 Q8NDZ9 215 aa4.47□□□□□ -1.69
PTCH1-214ENST00000547615 TRBV10-3A0A0K0K1G6 114 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms