RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 LINC00308Q8TCZ7 52 aa14.34□□□□□ -0.11
RBFOX1-210ENST00000547605 Q8N814 137 aa14.34□□□□□ -0.11
RBFOX1-210ENST00000547605 TRBV20-1A0A075B6N2 111 aa14.33□□□□□ -0.12
RBFOX1-210ENST00000547605 HYDINQ4G0P3 5121 aa14.32□□□□□ -0.12
RBFOX1-210ENST00000547605 RTL8CO15255 209 aa14.32□□□□□ -0.12
RBFOX1-210ENST00000547605 CNBPP62633 177 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-210ENST00000547605 RNF151Q2KHN1 245 aa14.31□□□□□ -0.12
RBFOX1-210ENST00000547605 LOC107984156A0A0G2JMH3 177 aa14.3□□□□□ -0.12
RBFOX1-210ENST00000547605 TNP2Q05952 138 aa14.3□□□□□ -0.12
RBFOX1-210ENST00000547605 ARL17AQ8IVW1 177 aa14.3□□□□□ -0.12
RBFOX1-210ENST00000547605 DNAH2Q9P225 4427 aa14.29□□□□□ -0.12
RBFOX1-210ENST00000547605 F8W1H4 67 aa14.29□□□□□ -0.12
RBFOX1-210ENST00000547605 NDUFC2-KCTD14E9PQ53 114 aa14.28□□□□□ -0.12
RBFOX1-210ENST00000547605 SACSQ9NZJ4 4579 aa14.27□□□□□ -0.13
RBFOX1-210ENST00000547605 SCGB1C2P0DMR2 95 aa14.27□□□□□ -0.13
RBFOX1-210ENST00000547605 PSMB2P49721 201 aa14.27□□□□□ -0.13
RBFOX1-210ENST00000547605 RPL18AQ02543 176 aaKnown RBP14.27□□□□□ -0.13
RBFOX1-210ENST00000547605 Q1RN00 199 aa14.27□□□□□ -0.13
RBFOX1-210ENST00000547605 GAGE2EQ4V326 116 aa14.27□□□□□ -0.13
RBFOX1-210ENST00000547605 GAGE2DQ9UEU5 116 aa14.27□□□□□ -0.13
RBFOX1-210ENST00000547605 EIF4EBP3O60516 100 aaPredicted RBP14.26□□□□□ -0.13
RBFOX1-210ENST00000547605 SOSTDC1Q6X4U4 206 aa14.26□□□□□ -0.13
RBFOX1-210ENST00000547605 SND1-IT1Q9HBX3 110 aa14.26□□□□□ -0.13
RBFOX1-210ENST00000547605 COX6CP09669 75 aa14.25□□□□□ -0.13
RBFOX1-210ENST00000547605 Q6ZRP5 223 aa14.25□□□□□ -0.13
RBFOX1-210ENST00000547605 H3BMG7 143 aa14.23□□□□□ -0.13
RBFOX1-210ENST00000547605 XAGE1AQ9HD64 81 aa14.23□□□□□ -0.13
RBFOX1-210ENST00000547605 LOC107984640A0A0U1RRK4 108 aa14.22□□□□□ -0.13
RBFOX1-210ENST00000547605 TLX1NBP0CAT3 122 aa14.22□□□□□ -0.13
RBFOX1-210ENST00000547605 FUSP35637 526 aaKnown RBP eCLIP14.21□□□□□ -0.13
RBFOX1-210ENST00000547605 GAGE2BQ13066 116 aa14.21□□□□□ -0.13
RBFOX1-210ENST00000547605 C9orf163Q8N9P6 203 aa14.21□□□□□ -0.13
RBFOX1-210ENST00000547605 H7C2G1 150 aa14.2□□□□□ -0.14
RBFOX1-210ENST00000547605 TRAV13-2A0A0B4J235 113 aa14.2□□□□□ -0.14
RBFOX1-210ENST00000547605 LINC01620Q4KN68 170 aa14.2□□□□□ -0.14
RBFOX1-210ENST00000547605 RPL13AP40429 203 aaKnown RBP14.19□□□□□ -0.14
RBFOX1-210ENST00000547605 IGLV5-52A0A0A0MRZ9 124 aa14.18□□□□□ -0.14
RBFOX1-210ENST00000547605 DNAH17Q9UFH2 4485 aa14.17□□□□□ -0.14
RBFOX1-210ENST00000547605 TCL1BO95988 128 aa14.16□□□□□ -0.14
RBFOX1-210ENST00000547605 ATXN8Q156A1 80 aa14.16□□□□□ -0.14
RBFOX1-210ENST00000547605 PKIGQ9Y2B9 76 aa14.15□□□□□ -0.14
RBFOX1-210ENST00000547605 K7ERU9 68 aa14.15□□□□□ -0.14
RBFOX1-210ENST00000547605 TRIAP1O43715 76 aa14.15□□□□□ -0.14
RBFOX1-210ENST00000547605 C9orf129Q5T035 196 aaKnown RBP14.15□□□□□ -0.14
RBFOX1-210ENST00000547605 FRAS1Q86XX4 4008 aa14.14□□□□□ -0.15
RBFOX1-210ENST00000547605 IGKV2-24A0A0C4DH68 120 aa14.14□□□□□ -0.15
RBFOX1-210ENST00000547605 LINC00336Q6ZUF6 198 aa14.14□□□□□ -0.15
RBFOX1-210ENST00000547605 A0A096LNI7 61 aa14.13□□□□□ -0.15
RBFOX1-210ENST00000547605 OCIAD2Q56VL3 154 aa14.13□□□□□ -0.15
RBFOX1-210ENST00000547605 PRO0461Q9UI25 63 aa14.13□□□□□ -0.15
RBFOX1-210ENST00000547605 KMT2CQ8NEZ4 4911 aaKnown RBP14.13□□□□□ -0.15
RBFOX1-210ENST00000547605 C16orf90A8MZG2 172 aa14.13□□□□□ -0.15
RBFOX1-210ENST00000547605 SDIM1Q6ZPB5 146 aa14.12□□□□□ -0.15
RBFOX1-210ENST00000547605 KRTAP10-2P60368 255 aa14.11□□□□□ -0.15
RBFOX1-210ENST00000547605 NDUFC2O95298 119 aa14.11□□□□□ -0.15
RBFOX1-210ENST00000547605 PRR3P79522 188 aaKnown RBP14.11□□□□□ -0.15
RBFOX1-210ENST00000547605 Q8NDZ9 215 aa14.11□□□□□ -0.15
RBFOX1-210ENST00000547605 M0QXV9 152 aa14.1□□□□□ -0.15
RBFOX1-210ENST00000547605 NCR3O14931 201 aa14.08□□□□□ -0.15
RBFOX1-210ENST00000547605 RYR2Q92736 4967 aa14.08□□□□□ -0.15
RBFOX1-210ENST00000547605 IGKV2-28A0A075B6P5 120 aa14.08□□□□□ -0.16
RBFOX1-210ENST00000547605 IGKV2D-28P01615 120 aa14.08□□□□□ -0.16
RBFOX1-210ENST00000547605 CHTF8P0CG12 524 aa14.08□□□□□ -0.16
RBFOX1-210ENST00000547605 FAM168BA1KXE4 195 aa14.06□□□□□ -0.16
RBFOX1-210ENST00000547605 VPREB1P12018 145 aa14.06□□□□□ -0.16
RBFOX1-210ENST00000547605 OR13C6PQ8NH95 151 aa14.06□□□□□ -0.16
RBFOX1-210ENST00000547605 DPH3Q96FX2 82 aa14.06□□□□□ -0.16
RBFOX1-210ENST00000547605 J3QR89 54 aa14.05□□□□□ -0.16
RBFOX1-210ENST00000547605 RPL28P46779 137 aaKnown RBP14.05□□□□□ -0.16
RBFOX1-210ENST00000547605 LINC00474Q9P2X8 69 aa14.05□□□□□ -0.16
RBFOX1-210ENST00000547605 SERTAD4-AS1Q5TG53 156 aa14.04□□□□□ -0.16
RBFOX1-210ENST00000547605 LINC00337Q8N6G1 96 aa14.04□□□□□ -0.16
RBFOX1-210ENST00000547605 NKAPP1Q8N9T2 125 aa14.04□□□□□ -0.16
RBFOX1-210ENST00000547605 FAM19A5Q7Z5A7 132 aaPredicted RBP14.04□□□□□ -0.16
RBFOX1-210ENST00000547605 LINC01600Q96MT4 127 aa14.04□□□□□ -0.16
RBFOX1-210ENST00000547605 LST1O00453 97 aa14.03□□□□□ -0.16
RBFOX1-210ENST00000547605 PLA2G2DQ9UNK4 145 aa14.03□□□□□ -0.16
RBFOX1-210ENST00000547605 C9JAW5 83 aa14.01□□□□□ -0.17
RBFOX1-210ENST00000547605 SLC25A20O43772 301 aa14.01□□□□□ -0.17
RBFOX1-210ENST00000547605 ETDBQ3ZM63 59 aa14.01□□□□□ -0.17
RBFOX1-210ENST00000547605 S100A7L2Q5SY68 101 aa14.01□□□□□ -0.17
RBFOX1-210ENST00000547605 FAT2Q9NYQ8 4349 aa14.01□□□□□ -0.17
RBFOX1-210ENST00000547605 TRBV10-2A0A0K0K1G8 114 aa14□□□□□ -0.17
RBFOX1-210ENST00000547605 SMCPP49901 116 aaPredicted RBP14□□□□□ -0.17
RBFOX1-210ENST00000547605 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14□□□□□ -0.17
RBFOX1-210ENST00000547605 HECTD4Q9Y4D8 3996 aa13.99□□□□□ -0.17
RBFOX1-210ENST00000547605 PANO1I0J062 215 aa13.99□□□□□ -0.17
RBFOX1-210ENST00000547605 M0R378 163 aa13.99□□□□□ -0.17
RBFOX1-210ENST00000547605 MTURNQ8N3F0 131 aa13.99□□□□□ -0.17
RBFOX1-210ENST00000547605 A0A1W2PNN7 141 aa13.99□□□□□ -0.17
RBFOX1-210ENST00000547605 H0YGX0 51 aa13.98□□□□□ -0.17
RBFOX1-210ENST00000547605 TEN1Q86WV5 123 aa13.98□□□□□ -0.17
RBFOX1-210ENST00000547605 H3BT86 120 aa13.97□□□□□ -0.17
RBFOX1-210ENST00000547605 KRTAP7-1Q8IUC3 87 aa13.97□□□□□ -0.17
RBFOX1-210ENST00000547605 ANKRD29Q8N6D5 301 aa13.97□□□□□ -0.17
RBFOX1-210ENST00000547605 SPACA4Q8TDM5 124 aa13.97□□□□□ -0.17
RBFOX1-210ENST00000547605 TMEM126AQ9H061 195 aa13.97□□□□□ -0.17
RBFOX1-210ENST00000547605 C22orf24Q9Y442 160 aa13.97□□□□□ -0.17
RBFOX1-210ENST00000547605 IGLV5-37A0A075B6J1 123 aa13.96□□□□□ -0.17
RBFOX1-210ENST00000547605 TRACP01848 142 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms