RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 UBE2BP63146 152 aa7.3□□□□□ -1.24
RAB5C-204ENST00000547517 C1orf137Q5JT78 98 aa7.3□□□□□ -1.24
RAB5C-204ENST00000547517 UQCR10Q9UDW1 63 aa7.3□□□□□ -1.24
RAB5C-204ENST00000547517 LEPROTL1O95214 131 aa7.29□□□□□ -1.24
RAB5C-204ENST00000547517 KRTAP11-1Q8IUC1 163 aa7.29□□□□□ -1.24
RAB5C-204ENST00000547517 NUPR1O60356 82 aa7.28□□□□□ -1.24
RAB5C-204ENST00000547517 SPINK6Q6UWN8 80 aa7.28□□□□□ -1.24
RAB5C-204ENST00000547517 HSPB8Q9UJY1 196 aa7.28□□□□□ -1.24
RAB5C-204ENST00000547517 TMEM223A0PJW6 202 aa7.27□□□□□ -1.25
RAB5C-204ENST00000547517 PFN2P35080 140 aa7.27□□□□□ -1.25
RAB5C-204ENST00000547517 ODF1Q14990 250 aa7.27□□□□□ -1.25
RAB5C-204ENST00000547517 ZNF625Q96I27 306 aaPredicted RBP7.27□□□□□ -1.25
RAB5C-204ENST00000547517 HSBP1L1C9JCN9 74 aa7.26□□□□□ -1.25
RAB5C-204ENST00000547517 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
RAB5C-204ENST00000547517 SPATA45Q537H7 98 aa7.26□□□□□ -1.25
RAB5C-204ENST00000547517 ERG28Q9UKR5 140 aa7.26□□□□□ -1.25
RAB5C-204ENST00000547517 PAM16Q9Y3D7 125 aa7.26□□□□□ -1.25
RAB5C-204ENST00000547517 C22orf24Q9Y442 160 aa7.26□□□□□ -1.25
RAB5C-204ENST00000547517 SRSF9Q13242 221 aaKnown RBP eCLIP7.25□□□□□ -1.25
RAB5C-204ENST00000547517 COL5A1-AS1Q5SY13 56 aa7.25□□□□□ -1.25
RAB5C-204ENST00000547517 SFTA2Q6UW10 78 aa7.25□□□□□ -1.25
RAB5C-204ENST00000547517 PET117Q6UWS5 81 aa7.25□□□□□ -1.25
RAB5C-204ENST00000547517 MAP1LC3CQ9BXW4 147 aa7.25□□□□□ -1.25
RAB5C-204ENST00000547517 IGLV7-43P04211 117 aa7.24□□□□□ -1.25
RAB5C-204ENST00000547517 MT1HL1P0DM35 61 aa7.24□□□□□ -1.25
RAB5C-204ENST00000547517 REG3GQ6UW15 175 aa7.24□□□□□ -1.25
RAB5C-204ENST00000547517 MRPL55Q7Z7F7 128 aaKnown RBP7.24□□□□□ -1.25
RAB5C-204ENST00000547517 A0A1B0GV90 55 aa7.23□□□□□ -1.25
RAB5C-204ENST00000547517 PLNP26678 52 aa7.23□□□□□ -1.25
RAB5C-204ENST00000547517 PMCHL2Q9BQD1 86 aa7.23□□□□□ -1.25
RAB5C-204ENST00000547517 SNHG12Q9BXW3 62 aa7.23□□□□□ -1.25
RAB5C-204ENST00000547517 TP73-AS1Q9UF72 201 aa7.23□□□□□ -1.25
RAB5C-204ENST00000547517 GAGE10A6NGK3 116 aa7.22□□□□□ -1.25
RAB5C-204ENST00000547517 COX17Q14061 63 aa7.22□□□□□ -1.25
RAB5C-204ENST00000547517 NKAPP1Q8N9T2 125 aa7.22□□□□□ -1.25
RAB5C-204ENST00000547517 SND1-IT1Q9HBX3 110 aa7.22□□□□□ -1.25
RAB5C-204ENST00000547517 PLA2G2DQ9UNK4 145 aa7.22□□□□□ -1.25
RAB5C-204ENST00000547517 TNXBP22105 4242 aa7.21□□□□□ -1.25
RAB5C-204ENST00000547517 A0A0U1RRA0 63 aa7.21□□□□□ -1.26
RAB5C-204ENST00000547517 RPL37AP8A6NKH3 93 aa7.21□□□□□ -1.26
RAB5C-204ENST00000547517 DPM2O94777 84 aa7.21□□□□□ -1.26
RAB5C-204ENST00000547517 LINC01600Q96MT4 127 aa7.21□□□□□ -1.26
RAB5C-204ENST00000547517 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
RAB5C-204ENST00000547517 IGLV5-37A0A075B6J1 123 aa7.2□□□□□ -1.26
RAB5C-204ENST00000547517 SYS1-DBNDD2H3BUS1 97 aa7.2□□□□□ -1.26
RAB5C-204ENST00000547517 IGKCP01834 107 aa7.2□□□□□ -1.26
RAB5C-204ENST00000547517 LINC00158P58513 81 aa7.2□□□□□ -1.26
RAB5C-204ENST00000547517 TSPEAR-AS2P59090 65 aa7.2□□□□□ -1.26
RAB5C-204ENST00000547517 MEIG1Q5JSS6 88 aa7.2□□□□□ -1.26
RAB5C-204ENST00000547517 DIRC1Q969H9 104 aa7.2□□□□□ -1.26
RAB5C-204ENST00000547517 LINC00167Q96N53 147 aa7.2□□□□□ -1.26
RAB5C-204ENST00000547517 H0Y9J4 135 aa7.19□□□□□ -1.26
RAB5C-204ENST00000547517 HERVK_113P61574 105 aa7.19□□□□□ -1.26
RAB5C-204ENST00000547517 NDUFA12Q9UI09 145 aa7.19□□□□□ -1.26
RAB5C-204ENST00000547517 LEPROTO15243 131 aa7.18□□□□□ -1.26
RAB5C-204ENST00000547517 SMIM13P0DJ93 91 aa7.18□□□□□ -1.26
RAB5C-204ENST00000547517 VPREB1P12018 145 aa7.18□□□□□ -1.26
RAB5C-204ENST00000547517 IGKV2-28A0A075B6P5 120 aa7.17□□□□□ -1.26
RAB5C-204ENST00000547517 MYMXA0A1B0GTQ4 84 aa7.17□□□□□ -1.26
RAB5C-204ENST00000547517 IGKV2D-28P01615 120 aa7.17□□□□□ -1.26
RAB5C-204ENST00000547517 HERV-K104P63124 156 aa7.17□□□□□ -1.26
RAB5C-204ENST00000547517 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
RAB5C-204ENST00000547517 LINC01545Q5VT33 79 aa7.17□□□□□ -1.26
RAB5C-204ENST00000547517 SLC25A34Q6PIV7 304 aa7.17□□□□□ -1.26
RAB5C-204ENST00000547517 Q8NDZ9 215 aa7.17□□□□□ -1.26
RAB5C-204ENST00000547517 PLEKHB2Q96CS7 222 aa7.17□□□□□ -1.26
RAB5C-204ENST00000547517 J3QQQ9 107 aa7.16□□□□□ -1.26
RAB5C-204ENST00000547517 BCE1O60756 84 aa7.16□□□□□ -1.26
RAB5C-204ENST00000547517 DLEU1O43261 78 aa7.15□□□□□ -1.26
RAB5C-204ENST00000547517 ZNF861PO60384 105 aa7.15□□□□□ -1.26
RAB5C-204ENST00000547517 LGALS3P17931 250 aaKnown RBP7.15□□□□□ -1.26
RAB5C-204ENST00000547517 MIR7-3HGQ8N6C7 128 aa7.15□□□□□ -1.26
RAB5C-204ENST00000547517 RPL28P46779 137 aaKnown RBP7.13□□□□□ -1.27
RAB5C-204ENST00000547517 KRTAP10-8P60410 259 aa7.13□□□□□ -1.27
RAB5C-204ENST00000547517 BATFQ16520 125 aa7.13□□□□□ -1.27
RAB5C-204ENST00000547517 BOD1L2Q8IYS8 172 aa7.13□□□□□ -1.27
RAB5C-204ENST00000547517 IGLV1-50A0A075B6I6 118 aa7.12□□□□□ -1.27
RAB5C-204ENST00000547517 TMEM238C9JI98 176 aa7.12□□□□□ -1.27
RAB5C-204ENST00000547517 E9PLD3 99 aa7.12□□□□□ -1.27
RAB5C-204ENST00000547517 NCR3O14931 201 aa7.12□□□□□ -1.27
RAB5C-204ENST00000547517 KRTAP1-4P0C5Y4 121 aa7.12□□□□□ -1.27
RAB5C-204ENST00000547517 NMUP48645 174 aa7.12□□□□□ -1.27
RAB5C-204ENST00000547517 UBE2AP49459 152 aa7.12□□□□□ -1.27
RAB5C-204ENST00000547517 PRR26Q8N8Z3 221 aa7.12□□□□□ -1.27
RAB5C-204ENST00000547517 DAND5Q8N907 189 aa7.12□□□□□ -1.27
RAB5C-204ENST00000547517 COX8AP10176 69 aa7.11□□□□□ -1.27
RAB5C-204ENST00000547517 TMEM126AQ9H061 195 aa7.11□□□□□ -1.27
RAB5C-204ENST00000547517 PRLHP81277 87 aa7.1□□□□□ -1.27
RAB5C-204ENST00000547517 ATOH7Q8N100 152 aa7.1□□□□□ -1.27
RAB5C-204ENST00000547517 M0R378 163 aa7.09□□□□□ -1.27
RAB5C-204ENST00000547517 FAM19A1Q7Z5A9 133 aa7.09□□□□□ -1.27
RAB5C-204ENST00000547517 KRTAP13-1Q8IUC0 172 aa7.09□□□□□ -1.27
RAB5C-204ENST00000547517 A0A0J9YXY3 114 aa7.08□□□□□ -1.28
RAB5C-204ENST00000547517 A6NDN8 102 aa7.08□□□□□ -1.28
RAB5C-204ENST00000547517 HINT1P49773 126 aaPredicted RBP7.07□□□□□ -1.28
RAB5C-204ENST00000547517 IGKV2D-26A0A0A0MRZ7 120 aa7.06□□□□□ -1.28
RAB5C-204ENST00000547517 NPC2P61916 151 aa7.06□□□□□ -1.28
RAB5C-204ENST00000547517 HSD52Q0P140 79 aa7.06□□□□□ -1.28
RAB5C-204ENST00000547517 UBE2V1Q13404 147 aa7.06□□□□□ -1.28
RAB5C-204ENST00000547517 ZNF815PA8K554 130 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms