RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 LINC01356Q8N9X3 169 aa8.28□□□□□ -1.08
RBFOX1-208ENST00000547372 PLAC8L1A1L4L8 177 aa8.28□□□□□ -1.08
RBFOX1-208ENST00000547372 SPTSSBQ8NFR3 76 aa8.28□□□□□ -1.08
RBFOX1-208ENST00000547372 GCN1Q92616 2671 aaKnown RBP8.28□□□□□ -1.08
RBFOX1-208ENST00000547372 TRBV6-8A0A0A6YYG3 113 aa8.27□□□□□ -1.09
RBFOX1-208ENST00000547372 DEFB4AO15263 64 aa8.27□□□□□ -1.09
RBFOX1-208ENST00000547372 DEFB114Q30KQ6 69 aa8.27□□□□□ -1.09
RBFOX1-208ENST00000547372 XAGE1AQ9HD64 81 aa8.27□□□□□ -1.09
RBFOX1-208ENST00000547372 FAM30AQ9NZY2 134 aa8.26□□□□□ -1.09
RBFOX1-208ENST00000547372 ZNF561-AS1K7EIQ3 104 aa8.26□□□□□ -1.09
RBFOX1-208ENST00000547372 DOPEY1Q5JWR5 2465 aa8.26□□□□□ -1.09
RBFOX1-208ENST00000547372 VPS13CQ709C8 3753 aa8.26□□□□□ -1.09
RBFOX1-208ENST00000547372 BCE1O60756 84 aa8.26□□□□□ -1.09
RBFOX1-208ENST00000547372 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
RBFOX1-208ENST00000547372 LINC01006Q8NI28 216 aa8.26□□□□□ -1.09
RBFOX1-208ENST00000547372 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
RBFOX1-208ENST00000547372 LINC00959A0A1B0GUT2 108 aa8.25□□□□□ -1.09
RBFOX1-208ENST00000547372 C1orf158Q8N1D5 194 aa8.25□□□□□ -1.09
RBFOX1-208ENST00000547372 A8MU10 97 aa8.24□□□□□ -1.09
RBFOX1-208ENST00000547372 LY6G6DO95868 133 aa8.24□□□□□ -1.09
RBFOX1-208ENST00000547372 LINC00167Q96N53 147 aa8.24□□□□□ -1.09
RBFOX1-208ENST00000547372 ZANQ9Y493 2812 aa8.24□□□□□ -1.09
RBFOX1-208ENST00000547372 CCL24O00175 119 aa8.23□□□□□ -1.09
RBFOX1-208ENST00000547372 CXCL6P80162 114 aa8.23□□□□□ -1.09
RBFOX1-208ENST00000547372 LINC00575Q6W349 94 aa8.23□□□□□ -1.09
RBFOX1-208ENST00000547372 MUC7Q8TAX7 377 aa8.23□□□□□ -1.09
RBFOX1-208ENST00000547372 C3orf84H3BNL1 204 aa8.23□□□□□ -1.09
RBFOX1-208ENST00000547372 ODF3L2Q3SX64 289 aa8.23□□□□□ -1.09
RBFOX1-208ENST00000547372 C6orf223Q8N319 242 aa8.23□□□□□ -1.09
RBFOX1-208ENST00000547372 CD164L2Q6UWJ8 174 aa8.22□□□□□ -1.09
RBFOX1-208ENST00000547372 C16orf74Q96GX8 76 aa8.22□□□□□ -1.09
RBFOX1-208ENST00000547372 PRR15Q8IV56 129 aa8.21□□□□□ -1.09
RBFOX1-208ENST00000547372 SPAG11BQ08648 103 aa8.21□□□□□ -1.1
RBFOX1-208ENST00000547372 Q6ZTC4 211 aa8.2□□□□□ -1.1
RBFOX1-208ENST00000547372 NIPBLQ6KC79 2804 aaeCLIP8.2□□□□□ -1.1
RBFOX1-208ENST00000547372 A8MUN3 132 aa8.2□□□□□ -1.1
RBFOX1-208ENST00000547372 Q6ZRP5 223 aa8.2□□□□□ -1.1
RBFOX1-208ENST00000547372 C1orf64Q8NEQ6 169 aa8.2□□□□□ -1.1
RBFOX1-208ENST00000547372 CHCHD10Q8WYQ3 142 aaPredicted RBP8.2□□□□□ -1.1
RBFOX1-208ENST00000547372 CD164Q04900 197 aa8.19□□□□□ -1.1
RBFOX1-208ENST00000547372 DIRC1Q969H9 104 aa8.19□□□□□ -1.1
RBFOX1-208ENST00000547372 KLK12Q9UKR0 248 aa8.19□□□□□ -1.1
RBFOX1-208ENST00000547372 APCP25054 2843 aa8.18□□□□□ -1.1
RBFOX1-208ENST00000547372 LOC110117498A0A087WWA1 95 aa8.18□□□□□ -1.1
RBFOX1-208ENST00000547372 FBN2P35556 2912 aa8.18□□□□□ -1.1
RBFOX1-208ENST00000547372 UNQ6190/PRO20217Q6UXQ8 127 aa8.17□□□□□ -1.1
RBFOX1-208ENST00000547372 TRAV22A0A0B4J277 110 aa8.17□□□□□ -1.1
RBFOX1-208ENST00000547372 Q8NDZ9 215 aa8.17□□□□□ -1.1
RBFOX1-208ENST00000547372 ZNF702PQ9H963 129 aa8.17□□□□□ -1.1
RBFOX1-208ENST00000547372 CELSR2Q9HCU4 2923 aa8.17□□□□□ -1.1
RBFOX1-208ENST00000547372 HIGD2BQ4VC39 106 aa8.17□□□□□ -1.1
RBFOX1-208ENST00000547372 REG3AQ06141 175 aa8.16□□□□□ -1.1
RBFOX1-208ENST00000547372 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
RBFOX1-208ENST00000547372 Q6ZRU5 148 aa8.16□□□□□ -1.1
RBFOX1-208ENST00000547372 FLNCQ14315 2725 aa8.16□□□□□ -1.1
RBFOX1-208ENST00000547372 CHKB-CPT1BH3BT56 60 aa8.15□□□□□ -1.1
RBFOX1-208ENST00000547372 hDV103S1A0JD37 113 aa8.15□□□□□ -1.11
RBFOX1-208ENST00000547372 PDE6GP18545 87 aa8.15□□□□□ -1.11
RBFOX1-208ENST00000547372 C4orf3Q8WVX3 66 aa8.15□□□□□ -1.11
RBFOX1-208ENST00000547372 DSCR9P59020 149 aa8.14□□□□□ -1.11
RBFOX1-208ENST00000547372 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
RBFOX1-208ENST00000547372 COX7BP24311 80 aa8.14□□□□□ -1.11
RBFOX1-208ENST00000547372 Q8IZM0 81 aa8.14□□□□□ -1.11
RBFOX1-208ENST00000547372 TEX15Q9BXT5 2789 aa8.13□□□□□ -1.11
RBFOX1-208ENST00000547372 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
RBFOX1-208ENST00000547372 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
RBFOX1-208ENST00000547372 PRO0255Q9UI72 69 aa8.13□□□□□ -1.11
RBFOX1-208ENST00000547372 NF1P21359 2839 aa8.12□□□□□ -1.11
RBFOX1-208ENST00000547372 CMC4P56277 68 aaPredicted RBP8.12□□□□□ -1.11
RBFOX1-208ENST00000547372 IGKV4-1P06312 121 aa8.11□□□□□ -1.11
RBFOX1-208ENST00000547372 Q6YL49 198 aa8.11□□□□□ -1.11
RBFOX1-208ENST00000547372 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
RBFOX1-208ENST00000547372 CYSRT1A8MQ03 144 aa8.11□□□□□ -1.11
RBFOX1-208ENST00000547372 UNC79Q9P2D8 2635 aa8.1□□□□□ -1.11
RBFOX1-208ENST00000547372 DEFB135Q30KP9 77 aa8.1□□□□□ -1.11
RBFOX1-208ENST00000547372 USP24Q9UPU5 2620 aa8.09□□□□□ -1.11
RBFOX1-208ENST00000547372 DEFB116Q30KQ4 102 aa8.09□□□□□ -1.11
RBFOX1-208ENST00000547372 NKAPP1Q8N9T2 125 aa8.09□□□□□ -1.11
RBFOX1-208ENST00000547372 SYCNQ0VAF6 134 aa8.08□□□□□ -1.12
RBFOX1-208ENST00000547372 ZNF73O43830 326 aaPredicted RBP8.08□□□□□ -1.12
RBFOX1-208ENST00000547372 ERC2-IT1O76042 136 aa8.08□□□□□ -1.12
RBFOX1-208ENST00000547372 Q1T7F1 81 aa8.08□□□□□ -1.12
RBFOX1-208ENST00000547372 FLNAP21333 2647 aaKnown RBP8.07□□□□□ -1.12
RBFOX1-208ENST00000547372 C9orf66Q5T8R8 295 aa8.06□□□□□ -1.12
RBFOX1-208ENST00000547372 CFAP46Q8IYW2 2715 aa8.06□□□□□ -1.12
RBFOX1-208ENST00000547372 LINC00612Q8N6U2 182 aa8.06□□□□□ -1.12
RBFOX1-208ENST00000547372 MXRA5Q9NR99 2828 aa8.05□□□□□ -1.12
RBFOX1-208ENST00000547372 PRR15LQ9BU68 103 aa8.05□□□□□ -1.12
RBFOX1-208ENST00000547372 COX17Q14061 63 aa8.04□□□□□ -1.12
RBFOX1-208ENST00000547372 A6NED7 52 aa8.04□□□□□ -1.12
RBFOX1-208ENST00000547372 UBE2BP63146 152 aa8.03□□□□□ -1.12
RBFOX1-208ENST00000547372 C11orf45Q8TAV5 145 aa8.03□□□□□ -1.12
RBFOX1-208ENST00000547372 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
RBFOX1-208ENST00000547372 HCG22E2RYF7 251 aa8.03□□□□□ -1.12
RBFOX1-208ENST00000547372 UTP20O75691 2785 aaKnown RBP8.02□□□□□ -1.13
RBFOX1-208ENST00000547372 SETXQ7Z333 2677 aaKnown RBP8.02□□□□□ -1.13
RBFOX1-208ENST00000547372 PSCAO43653 123 aa8.02□□□□□ -1.13
RBFOX1-208ENST00000547372 KTN1-AS1Q86SY8 53 aa8.02□□□□□ -1.13
RBFOX1-208ENST00000547372 KIAA0087Q14695 138 aa8.02□□□□□ -1.13
RBFOX1-208ENST00000547372 ST20-AS1Q8NBB2 130 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms