RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 TFF1P04155 84 aa1.77□□□□□ -2.13
HCFC2-203ENST00000547194 RPL39P5Q59GN2 51 aa1.77□□□□□ -2.13
HCFC2-203ENST00000547194 C20orf197Q8N268 126 aa1.77□□□□□ -2.13
HCFC2-203ENST00000547194 LINC00308Q8TCZ7 52 aa1.77□□□□□ -2.13
HCFC2-203ENST00000547194 DMAC1Q96GE9 116 aa1.77□□□□□ -2.13
HCFC2-203ENST00000547194 UBL5Q9BZL1 73 aa1.77□□□□□ -2.13
HCFC2-203ENST00000547194 KAAG1Q9UBP8 84 aa1.77□□□□□ -2.13
HCFC2-203ENST00000547194 URB1O60287 2271 aaKnown RBP1.77□□□□□ -2.13
HCFC2-203ENST00000547194 LOC101927531A0A1B0GV80 90 aa1.76□□□□□ -2.13
HCFC2-203ENST00000547194 F8WEM9 126 aa1.76□□□□□ -2.13
HCFC2-203ENST00000547194 CNBPP62633 177 aaKnown RBP1.76□□□□□ -2.13
HCFC2-203ENST00000547194 ZCCHC13Q8WW36 166 aaKnown RBP1.76□□□□□ -2.13
HCFC2-203ENST00000547194 ZNF625Q96I27 306 aaPredicted RBP1.76□□□□□ -2.13
HCFC2-203ENST00000547194 LIMD2Q9BT23 127 aa1.76□□□□□ -2.13
HCFC2-203ENST00000547194 CDC42SE1Q9NRR8 79 aa1.76□□□□□ -2.13
HCFC2-203ENST00000547194 TIMM8BQ9Y5J9 83 aaPredicted RBP1.76□□□□□ -2.13
HCFC2-203ENST00000547194 ASXL3Q9C0F0 2248 aa1.76□□□□□ -2.13
HCFC2-203ENST00000547194 CACNA1EQ15878 2313 aa1.75□□□□□ -2.13
HCFC2-203ENST00000547194 TRAV21A0A0B4J279 112 aa1.75□□□□□ -2.13
HCFC2-203ENST00000547194 A0A0G2JQZ4 141 aa1.75□□□□□ -2.13
HCFC2-203ENST00000547194 RNASE3P12724 160 aaKnown RBP1.75□□□□□ -2.13
HCFC2-203ENST00000547194 DEFB110Q30KQ9 67 aa1.75□□□□□ -2.13
HCFC2-203ENST00000547194 CSAG1Q6PB30 78 aa1.75□□□□□ -2.13
HCFC2-203ENST00000547194 LINC00474Q9P2X8 69 aa1.75□□□□□ -2.13
HCFC2-203ENST00000547194 PTPRQQ9UMZ3 2332 aa1.74□□□□□ -2.13
HCFC2-203ENST00000547194 A0A087WVE0 104 aa1.74□□□□□ -2.13
HCFC2-203ENST00000547194 M0QY20 66 aa1.74□□□□□ -2.13
HCFC2-203ENST00000547194 M0R1W7 72 aa1.74□□□□□ -2.13
HCFC2-203ENST00000547194 NDUFB1O75438 58 aa1.74□□□□□ -2.13
HCFC2-203ENST00000547194 PRR9Q5T870 116 aa1.74□□□□□ -2.13
HCFC2-203ENST00000547194 PATE1Q8WXA2 126 aa1.74□□□□□ -2.13
HCFC2-203ENST00000547194 WNK2Q9Y3S1 2297 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 TRGV4A0A0C4DH28 118 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 IGKV3D-7A0A0C4DH55 119 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 TRBV6-4A0A1B0GX49 114 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 NUPR2A6NF83 97 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 A8MTW9 85 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 DEFB108AA8MXU0 73 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 CHKB-CPT1BH3BT56 60 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 P0C880 135 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 MOBPQ13875 183 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 HCP5Q6MZN7 132 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 KRTAP26-1Q6PEX3 210 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 Q8N6K4 173 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 KNL1Q8NG31 2342 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 ABCA4P78363 2273 aa1.73□□□□□ -2.13
HCFC2-203ENST00000547194 KIAA0100Q14667 2235 aaKnown RBP1.72□□□□□ -2.13
HCFC2-203ENST00000547194 A0A0C4DFX4 3053 aa1.72□□□□□ -2.13
HCFC2-203ENST00000547194 IGKV2-40A0A087WW87 121 aaPredicted RBP1.72□□□□□ -2.13
HCFC2-203ENST00000547194 TRAV22A0A0B4J277 110 aa1.72□□□□□ -2.13
HCFC2-203ENST00000547194 LRCOL1A6NCL2 159 aa1.72□□□□□ -2.13
HCFC2-203ENST00000547194 IGKV2D-40P01614 121 aaPredicted RBP1.72□□□□□ -2.13
HCFC2-203ENST00000547194 FAM74A4Q5TZK3 123 aa1.72□□□□□ -2.13
HCFC2-203ENST00000547194 Q5VV11 94 aa1.72□□□□□ -2.13
HCFC2-203ENST00000547194 RPL39LQ96EH5 51 aaKnown RBP1.72□□□□□ -2.13
HCFC2-203ENST00000547194 GAFA1Q96PS6 74 aa1.72□□□□□ -2.13
HCFC2-203ENST00000547194 WFDC10AQ9H1F0 79 aa1.72□□□□□ -2.13
HCFC2-203ENST00000547194 PLAC8Q9NZF1 115 aa1.72□□□□□ -2.13
HCFC2-203ENST00000547194 CACNA1BQ00975 2339 aa1.71□□□□□ -2.14
HCFC2-203ENST00000547194 PLCE1Q9P212 2302 aa1.71□□□□□ -2.14
HCFC2-203ENST00000547194 IGKV2-29A2NJV5 120 aaPredicted RBP1.71□□□□□ -2.14
HCFC2-203ENST00000547194 KRTAP10-10P60014 251 aa1.71□□□□□ -2.14
HCFC2-203ENST00000547194 RPL39P62891 51 aaKnown RBP1.71□□□□□ -2.14
HCFC2-203ENST00000547194 COX17Q14061 63 aa1.71□□□□□ -2.14
HCFC2-203ENST00000547194 NREPQ16612 68 aa1.71□□□□□ -2.14
HCFC2-203ENST00000547194 ENHOQ6UWT2 76 aa1.71□□□□□ -2.14
HCFC2-203ENST00000547194 SMIM11BQ8TCY0 68 aa1.71□□□□□ -2.14
HCFC2-203ENST00000547194 CDC42SE2Q9NRR3 84 aa1.71□□□□□ -2.14
HCFC2-203ENST00000547194 CR1P17927 2039 aa1.71□□□□□ -2.14
HCFC2-203ENST00000547194 A0A1W2PNN7 141 aa1.7□□□□□ -2.14
HCFC2-203ENST00000547194 CLPSL1A2RUU4 121 aa1.7□□□□□ -2.14
HCFC2-203ENST00000547194 H3BUA1 57 aa1.7□□□□□ -2.14
HCFC2-203ENST00000547194 TECTAO75443 2155 aa1.7□□□□□ -2.14
HCFC2-203ENST00000547194 C10orf55Q5SWW7 151 aa1.7□□□□□ -2.14
HCFC2-203ENST00000547194 TTTY12Q9BZ98 90 aa1.7□□□□□ -2.14
HCFC2-203ENST00000547194 KCNQ1DNQ9H478 68 aa1.7□□□□□ -2.14
HCFC2-203ENST00000547194 SNURFQ9Y675 71 aa1.7□□□□□ -2.14
HCFC2-203ENST00000547194 ICE1Q9Y2F5 2266 aa1.69□□□□□ -2.14
HCFC2-203ENST00000547194 A0A096LNT2 108 aa1.69□□□□□ -2.14
HCFC2-203ENST00000547194 SPRR5A0A1B0GTR4 108 aa1.69□□□□□ -2.14
HCFC2-203ENST00000547194 NDUFA4O00483 81 aa1.69□□□□□ -2.14
HCFC2-203ENST00000547194 COX7BP24311 80 aa1.69□□□□□ -2.14
HCFC2-203ENST00000547194 SPAG11BQ08648 103 aa1.69□□□□□ -2.14
HCFC2-203ENST00000547194 SPAG11AQ6PDA7 123 aa1.69□□□□□ -2.14
HCFC2-203ENST00000547194 COA5Q86WW8 74 aa1.69□□□□□ -2.14
HCFC2-203ENST00000547194 CDKN2A-AS1Q9UH64 79 aa1.69□□□□□ -2.14
HCFC2-203ENST00000547194 LINC01558Q9Y6Z2 57 aa1.69□□□□□ -2.14
HCFC2-203ENST00000547194 IGKV3-7A0A075B6H7 116 aa1.68□□□□□ -2.14
HCFC2-203ENST00000547194 IGKV4-1P06312 121 aa1.68□□□□□ -2.14
HCFC2-203ENST00000547194 TPRXLQ17RH7 258 aa1.68□□□□□ -2.14
HCFC2-203ENST00000547194 MINOS1Q5TGZ0 78 aa1.68□□□□□ -2.14
HCFC2-203ENST00000547194 IGFL1Q6UW32 110 aa1.68□□□□□ -2.14
HCFC2-203ENST00000547194 LINC00575Q6W349 94 aa1.68□□□□□ -2.14
HCFC2-203ENST00000547194 COX7B2Q8TF08 81 aa1.68□□□□□ -2.14
HCFC2-203ENST00000547194 PCNTO95613 3336 aa1.68□□□□□ -2.14
HCFC2-203ENST00000547194 ZFHX2Q9C0A1 2572 aaPredicted RBP1.68□□□□□ -2.14
HCFC2-203ENST00000547194 AHCTF1Q8WYP5 2266 aa1.68□□□□□ -2.14
HCFC2-203ENST00000547194 DOPEY2Q9Y3R5 2298 aa1.68□□□□□ -2.14
HCFC2-203ENST00000547194 IGLV5-48A0A075B6I7 105 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms