RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 COX17Q14061 63 aa6.43□□□□□ -1.38
LINC00661-202ENST00000547102 TRAV12-1A0A0B4J245 112 aa6.42□□□□□ -1.38
LINC00661-202ENST00000547102 S100A6P06703 90 aa6.42□□□□□ -1.38
LINC00661-202ENST00000547102 UBE2AP49459 152 aa6.42□□□□□ -1.38
LINC00661-202ENST00000547102 RPL24P83731 157 aaKnown RBP6.42□□□□□ -1.38
LINC00661-202ENST00000547102 IFI27L1Q96BM0 104 aa6.42□□□□□ -1.38
LINC00661-202ENST00000547102 ZNF625Q96I27 306 aaPredicted RBP6.42□□□□□ -1.38
LINC00661-202ENST00000547102 SND1-IT1Q9HBX3 110 aa6.42□□□□□ -1.38
LINC00661-202ENST00000547102 FAM19A2Q8N3H0 131 aa6.41□□□□□ -1.38
LINC00661-202ENST00000547102 IGKV2-28A0A075B6P5 120 aa6.4□□□□□ -1.38
LINC00661-202ENST00000547102 IGKV2D-28P01615 120 aa6.4□□□□□ -1.38
LINC00661-202ENST00000547102 TMEM223A0PJW6 202 aa6.39□□□□□ -1.39
LINC00661-202ENST00000547102 C5orf52A6NGY3 159 aa6.39□□□□□ -1.39
LINC00661-202ENST00000547102 LEPROTL1O95214 131 aa6.39□□□□□ -1.39
LINC00661-202ENST00000547102 VPREB1P12018 145 aa6.39□□□□□ -1.39
LINC00661-202ENST00000547102 LINC00158P58513 81 aa6.39□□□□□ -1.39
LINC00661-202ENST00000547102 H0Y8G0 127 aa6.38□□□□□ -1.39
LINC00661-202ENST00000547102 CRYGAP11844 174 aa6.38□□□□□ -1.39
LINC00661-202ENST00000547102 HIST3H2BBQ8N257 126 aa6.38□□□□□ -1.39
LINC00661-202ENST00000547102 HSPB8Q9UJY1 196 aa6.38□□□□□ -1.39
LINC00661-202ENST00000547102 SNRPEP62304 92 aaKnown RBP6.37□□□□□ -1.39
LINC00661-202ENST00000547102 MEIG1Q5JSS6 88 aa6.37□□□□□ -1.39
LINC00661-202ENST00000547102 LRP2P98164 4655 aa6.36□□□□□ -1.39
LINC00661-202ENST00000547102 A0A0U1RRA0 63 aa6.36□□□□□ -1.39
LINC00661-202ENST00000547102 S100A2P29034 98 aa6.36□□□□□ -1.39
LINC00661-202ENST00000547102 FAM19A1Q7Z5A9 133 aa6.36□□□□□ -1.39
LINC00661-202ENST00000547102 LINC00587B1AMM8 73 aa6.35□□□□□ -1.39
LINC00661-202ENST00000547102 TMEM238C9JI98 176 aa6.35□□□□□ -1.39
LINC00661-202ENST00000547102 FABP4P15090 132 aa6.35□□□□□ -1.39
LINC00661-202ENST00000547102 HERV-K104P63124 156 aa6.35□□□□□ -1.39
LINC00661-202ENST00000547102 PRLHP81277 87 aa6.35□□□□□ -1.39
LINC00661-202ENST00000547102 KRTAP13-1Q8IUC0 172 aa6.35□□□□□ -1.39
LINC00661-202ENST00000547102 TYMSOSQ8TAI1 123 aa6.35□□□□□ -1.39
LINC00661-202ENST00000547102 HIST1H2BLQ99880 126 aa6.35□□□□□ -1.39
LINC00661-202ENST00000547102 TMEM126AQ9H061 195 aa6.35□□□□□ -1.39
LINC00661-202ENST00000547102 TMA7Q9Y2S6 64 aaKnown RBP6.35□□□□□ -1.39
LINC00661-202ENST00000547102 A0A087X002 238 aa6.34□□□□□ -1.39
LINC00661-202ENST00000547102 PRR4Q16378 134 aa6.34□□□□□ -1.39
LINC00661-202ENST00000547102 MAP1LC3CQ9BXW4 147 aa6.34□□□□□ -1.39
LINC00661-202ENST00000547102 NDUFA12Q9UI09 145 aa6.34□□□□□ -1.39
LINC00661-202ENST00000547102 MYMXA0A1B0GTQ4 84 aa6.33□□□□□ -1.4
LINC00661-202ENST00000547102 M0R378 163 aa6.33□□□□□ -1.4
LINC00661-202ENST00000547102 SMIM13P0DJ93 91 aa6.33□□□□□ -1.4
LINC00661-202ENST00000547102 PLNP26678 52 aa6.33□□□□□ -1.4
LINC00661-202ENST00000547102 FAM229BQ4G0N7 80 aa6.33□□□□□ -1.4
LINC00661-202ENST00000547102 BOD1L2Q8IYS8 172 aa6.33□□□□□ -1.4
LINC00661-202ENST00000547102 SYS1-DBNDD2H3BUS1 97 aa6.32□□□□□ -1.4
LINC00661-202ENST00000547102 TSPAN13O95857 204 aa6.32□□□□□ -1.4
LINC00661-202ENST00000547102 HERVK_113P61574 105 aa6.32□□□□□ -1.4
LINC00661-202ENST00000547102 PET117Q6UWS5 81 aa6.32□□□□□ -1.4
LINC00661-202ENST00000547102 MIR7-3HGQ8N6C7 128 aa6.32□□□□□ -1.4
LINC00661-202ENST00000547102 Q8NDZ9 215 aa6.32□□□□□ -1.4
LINC00661-202ENST00000547102 PLEKHB2Q96CS7 222 aa6.32□□□□□ -1.4
LINC00661-202ENST00000547102 ANAPC11Q9NYG5 84 aa6.32□□□□□ -1.4
LINC00661-202ENST00000547102 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
LINC00661-202ENST00000547102 C3orf79P0CE67 100 aa6.31□□□□□ -1.4
LINC00661-202ENST00000547102 S100A12P80511 92 aa6.31□□□□□ -1.4
LINC00661-202ENST00000547102 HIGD2AQ9BW72 106 aa6.31□□□□□ -1.4
LINC00661-202ENST00000547102 PRYO14603 147 aa6.3□□□□□ -1.4
LINC00661-202ENST00000547102 NCR3O14931 201 aa6.3□□□□□ -1.4
LINC00661-202ENST00000547102 LEPROTO15243 131 aa6.3□□□□□ -1.4
LINC00661-202ENST00000547102 DPM2O94777 84 aa6.3□□□□□ -1.4
LINC00661-202ENST00000547102 LINC01545Q5VT33 79 aa6.3□□□□□ -1.4
LINC00661-202ENST00000547102 IGKCP01834 107 aa6.29□□□□□ -1.4
LINC00661-202ENST00000547102 LGALS3P17931 250 aaKnown RBP6.29□□□□□ -1.4
LINC00661-202ENST00000547102 AKR1D1P51857 326 aa6.29□□□□□ -1.4
LINC00661-202ENST00000547102 KRTDAPP60985 99 aa6.29□□□□□ -1.4
LINC00661-202ENST00000547102 LINC00304Q8N9R0 145 aa6.29□□□□□ -1.4
LINC00661-202ENST00000547102 ZNF706Q9Y5V0 76 aaPredicted RBP6.29□□□□□ -1.4
LINC00661-202ENST00000547102 J3QQQ9 107 aa6.28□□□□□ -1.4
LINC00661-202ENST00000547102 NMUP48645 174 aa6.28□□□□□ -1.4
LINC00661-202ENST00000547102 TSPEAR-AS2P59090 65 aa6.28□□□□□ -1.4
LINC00661-202ENST00000547102 KRTAP13-2Q52LG2 175 aa6.28□□□□□ -1.4
LINC00661-202ENST00000547102 MIEN1Q9BRT3 115 aa6.28□□□□□ -1.4
LINC00661-202ENST00000547102 ETDCA0A1B0GVM5 59 aa6.27□□□□□ -1.41
LINC00661-202ENST00000547102 C20orf202A1L168 122 aa6.27□□□□□ -1.41
LINC00661-202ENST00000547102 PMCHL2Q9BQD1 86 aa6.27□□□□□ -1.41
LINC00661-202ENST00000547102 DAND5Q8N907 189 aa6.26□□□□□ -1.41
LINC00661-202ENST00000547102 KCNQ1DNQ9H478 68 aa6.26□□□□□ -1.41
LINC00661-202ENST00000547102 TRBV10-3A0A0K0K1G6 114 aa6.25□□□□□ -1.41
LINC00661-202ENST00000547102 LINC00337Q8N6G1 96 aa6.25□□□□□ -1.41
LINC00661-202ENST00000547102 SPRR4Q96PI1 79 aa6.25□□□□□ -1.41
LINC00661-202ENST00000547102 RNF213Q63HN8 5207 aa6.24□□□□□ -1.41
LINC00661-202ENST00000547102 JOSD1Q15040 202 aaPredicted RBP6.24□□□□□ -1.41
LINC00661-202ENST00000547102 SPANXB1Q9NS25 103 aaPredicted RBP6.24□□□□□ -1.41
LINC00661-202ENST00000547102 LPAP08519 4548 aa6.23□□□□□ -1.41
LINC00661-202ENST00000547102 LOC107984156A0A0G2JMH3 177 aa6.23□□□□□ -1.41
LINC00661-202ENST00000547102 TRBV10-2A0A0K0K1G8 114 aa6.23□□□□□ -1.41
LINC00661-202ENST00000547102 DDTP30046 118 aa6.23□□□□□ -1.41
LINC00661-202ENST00000547102 SPRR1AP35321 89 aa6.23□□□□□ -1.41
LINC00661-202ENST00000547102 CTAG1AP78358 180 aa6.23□□□□□ -1.41
LINC00661-202ENST00000547102 S100A7L2Q5SY68 101 aa6.23□□□□□ -1.41
LINC00661-202ENST00000547102 ARL17AQ8IVW1 177 aa6.23□□□□□ -1.41
LINC00661-202ENST00000547102 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
LINC00661-202ENST00000547102 E9PLD3 99 aa6.22□□□□□ -1.41
LINC00661-202ENST00000547102 SCGB1D1O95968 90 aa6.22□□□□□ -1.41
LINC00661-202ENST00000547102 C4orf48Q5BLP8 95 aa6.21□□□□□ -1.42
LINC00661-202ENST00000547102 SPAG11AQ6PDA7 123 aa6.21□□□□□ -1.42
LINC00661-202ENST00000547102 SMCR5Q8TEV8 140 aa6.21□□□□□ -1.42
LINC00661-202ENST00000547102 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms