RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 LINC00158P58513 81 aa11.48□□□□□ -0.57
SCN8A-204ENST00000546961 TMEM170BQ5T4T1 132 aa11.48□□□□□ -0.57
SCN8A-204ENST00000546961 SPAG11AQ6PDA7 123 aa11.48□□□□□ -0.57
SCN8A-204ENST00000546961 BAGE3Q86Y29 109 aa11.48□□□□□ -0.57
SCN8A-204ENST00000546961 C11orf86A6NJI1 115 aa11.47□□□□□ -0.57
SCN8A-204ENST00000546961 LINC00614P0C842 121 aa11.47□□□□□ -0.57
SCN8A-204ENST00000546961 C4orf48Q5BLP8 95 aa11.47□□□□□ -0.57
SCN8A-204ENST00000546961 SEC11CQ9BY50 192 aa11.47□□□□□ -0.57
SCN8A-204ENST00000546961 A0A0U1RRA0 63 aa11.46□□□□□ -0.57
SCN8A-204ENST00000546961 PMCHL1Q16048 86 aa11.46□□□□□ -0.57
SCN8A-204ENST00000546961 URB1-AS1Q96HZ7 61 aa11.46□□□□□ -0.57
SCN8A-204ENST00000546961 SPRR4Q96PI1 79 aa11.46□□□□□ -0.57
SCN8A-204ENST00000546961 HBDP02042 147 aa11.45□□□□□ -0.58
SCN8A-204ENST00000546961 SFTA2Q6UW10 78 aa11.45□□□□□ -0.58
SCN8A-204ENST00000546961 LINC00337Q8N6G1 96 aa11.43□□□□□ -0.58
SCN8A-204ENST00000546961 C18orf32Q8TCD1 76 aa11.43□□□□□ -0.58
SCN8A-204ENST00000546961 DAND5Q8N907 189 aa11.42□□□□□ -0.58
SCN8A-204ENST00000546961 RPS10P5Q9NQ39 176 aa11.42□□□□□ -0.58
SCN8A-204ENST00000546961 TRAPPC1Q9Y5R8 145 aa11.42□□□□□ -0.58
SCN8A-204ENST00000546961 ATP6V1G1O75348 118 aa11.41□□□□□ -0.58
SCN8A-204ENST00000546961 FP248Q71RG6 208 aaPredicted RBP11.41□□□□□ -0.58
SCN8A-204ENST00000546961 ZNF706Q9Y5V0 76 aaPredicted RBP11.41□□□□□ -0.58
SCN8A-204ENST00000546961 Q8NBF4 154 aa11.4□□□□□ -0.58
SCN8A-204ENST00000546961 CHTOPQ9Y3Y2 248 aaKnown RBP11.4□□□□□ -0.58
SCN8A-204ENST00000546961 KRTAP9-6A0A140TA67 174 aa11.39□□□□□ -0.59
SCN8A-204ENST00000546961 SMCR5Q8TEV8 140 aa11.39□□□□□ -0.59
SCN8A-204ENST00000546961 BOD1L2Q8IYS8 172 aa11.38□□□□□ -0.59
SCN8A-204ENST00000546961 SMIM13P0DJ93 91 aa11.37□□□□□ -0.59
SCN8A-204ENST00000546961 IFITM2Q01629 132 aa11.37□□□□□ -0.59
SCN8A-204ENST00000546961 TMEM223A0PJW6 202 aa11.36□□□□□ -0.59
SCN8A-204ENST00000546961 PRYO14603 147 aa11.36□□□□□ -0.59
SCN8A-204ENST00000546961 RHEBQ15382 184 aa11.36□□□□□ -0.59
SCN8A-204ENST00000546961 NCR3O14931 201 aa11.35□□□□□ -0.59
SCN8A-204ENST00000546961 KRTAP13-3Q3SY46 172 aa11.35□□□□□ -0.59
SCN8A-204ENST00000546961 COMMD7Q86VX2 200 aa11.35□□□□□ -0.59
SCN8A-204ENST00000546961 MEIG1Q5JSS6 88 aa11.34□□□□□ -0.59
SCN8A-204ENST00000546961 C10orf91Q5T1B1 145 aa11.34□□□□□ -0.59
SCN8A-204ENST00000546961 KCNQ1DNQ9H478 68 aa11.34□□□□□ -0.59
SCN8A-204ENST00000546961 ETDCA0A1B0GVM5 59 aa11.33□□□□□ -0.6
SCN8A-204ENST00000546961 SPINK1P00995 79 aa11.33□□□□□ -0.6
SCN8A-204ENST00000546961 SPRR1AP35321 89 aa11.32□□□□□ -0.6
SCN8A-204ENST00000546961 MIR7-3HGQ8N6C7 128 aa11.32□□□□□ -0.6
SCN8A-204ENST00000546961 ASB16-AS1Q495Z4 193 aa11.31□□□□□ -0.6
SCN8A-204ENST00000546961 GAGE2AQ6NT46 116 aa11.31□□□□□ -0.6
SCN8A-204ENST00000546961 TRBV10-3A0A0K0K1G6 114 aa11.3□□□□□ -0.6
SCN8A-204ENST00000546961 KRTAP4-16G5E9R7 235 aaPredicted RBP11.3□□□□□ -0.6
SCN8A-204ENST00000546961 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
SCN8A-204ENST00000546961 IFI27L1Q96BM0 104 aa11.29□□□□□ -0.6
SCN8A-204ENST00000546961 LINC01547P58512 204 aaPredicted RBP11.28□□□□□ -0.6
SCN8A-204ENST00000546961 HERV-K104P63124 156 aa11.28□□□□□ -0.6
SCN8A-204ENST00000546961 LINC00483Q53H64 154 aa11.27□□□□□ -0.61
SCN8A-204ENST00000546961 IGLV9-49A0A0B4J1Y8 123 aa11.26□□□□□ -0.61
SCN8A-204ENST00000546961 LINC00587B1AMM8 73 aa11.26□□□□□ -0.61
SCN8A-204ENST00000546961 SEC61BP60468 96 aaKnown RBP11.26□□□□□ -0.61
SCN8A-204ENST00000546961 S100A12P80511 92 aa11.26□□□□□ -0.61
SCN8A-204ENST00000546961 KRTAP4-1Q9BYQ7 146 aa11.26□□□□□ -0.61
SCN8A-204ENST00000546961 NDUFA12Q9UI09 145 aa11.26□□□□□ -0.61
SCN8A-204ENST00000546961 ERC2-IT1O76042 136 aa11.25□□□□□ -0.61
SCN8A-204ENST00000546961 MOBPQ13875 183 aa11.25□□□□□ -0.61
SCN8A-204ENST00000546961 B5MCH6 92 aa11.24□□□□□ -0.61
SCN8A-204ENST00000546961 SSBP3-AS1Q7Z2R9 100 aa11.24□□□□□ -0.61
SCN8A-204ENST00000546961 CHCHD1Q96BP2 118 aaKnown RBP11.24□□□□□ -0.61
SCN8A-204ENST00000546961 MAP1LC3CQ9BXW4 147 aa11.24□□□□□ -0.61
SCN8A-204ENST00000546961 MYMXA0A1B0GTQ4 84 aa11.23□□□□□ -0.61
SCN8A-204ENST00000546961 APOC3P02656 99 aa11.21□□□□□ -0.61
SCN8A-204ENST00000546961 DDTP30046 118 aa11.2□□□□□ -0.62
SCN8A-204ENST00000546961 Q8N377 158 aa11.2□□□□□ -0.62
SCN8A-204ENST00000546961 H0Y8G0 127 aa11.19□□□□□ -0.62
SCN8A-204ENST00000546961 FAM19A2Q8N3H0 131 aa11.19□□□□□ -0.62
SCN8A-204ENST00000546961 SLC25A20O43772 301 aa11.18□□□□□ -0.62
SCN8A-204ENST00000546961 RPS29P62273 56 aaKnown RBP11.18□□□□□ -0.62
SCN8A-204ENST00000546961 Q9BRP9 147 aa11.18□□□□□ -0.62
SCN8A-204ENST00000546961 LOC107984156A0A0G2JMH3 177 aa11.16□□□□□ -0.62
SCN8A-204ENST00000546961 TRBV10-2A0A0K0K1G8 114 aa11.16□□□□□ -0.62
SCN8A-204ENST00000546961 SNAPINO95295 136 aa11.16□□□□□ -0.62
SCN8A-204ENST00000546961 ARL17AQ8IVW1 177 aa11.16□□□□□ -0.62
SCN8A-204ENST00000546961 HSBP1O75506 76 aa11.15□□□□□ -0.62
SCN8A-204ENST00000546961 TSPEAR-AS2P59090 65 aa11.15□□□□□ -0.62
SCN8A-204ENST00000546961 LEPROTO15243 131 aa11.14□□□□□ -0.63
SCN8A-204ENST00000546961 Q6ZRX8 168 aa11.14□□□□□ -0.63
SCN8A-204ENST00000546961 S100A7L2Q5SY68 101 aa11.13□□□□□ -0.63
SCN8A-204ENST00000546961 SVBPQ8N300 66 aa11.13□□□□□ -0.63
SCN8A-204ENST00000546961 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
SCN8A-204ENST00000546961 XP32Q5T750 250 aa11.12□□□□□ -0.63
SCN8A-204ENST00000546961 C9orf153Q5TBE3 101 aa11.12□□□□□ -0.63
SCN8A-204ENST00000546961 SPANXB1Q9NS25 103 aaPredicted RBP11.12□□□□□ -0.63
SCN8A-204ENST00000546961 LCE2DQ5TA82 110 aaPredicted RBP11.11□□□□□ -0.63
SCN8A-204ENST00000546961 YPEL4Q96NS1 127 aa11.11□□□□□ -0.63
SCN8A-204ENST00000546961 MIEN1Q9BRT3 115 aa11.11□□□□□ -0.63
SCN8A-204ENST00000546961 J3QQQ9 107 aa11.1□□□□□ -0.63
SCN8A-204ENST00000546961 IGLV6-57P01721 117 aa11.1□□□□□ -0.63
SCN8A-204ENST00000546961 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
SCN8A-204ENST00000546961 LEPROTL1O95214 131 aa11.08□□□□□ -0.64
SCN8A-204ENST00000546961 ST20-AS1Q8NBB2 130 aa11.08□□□□□ -0.64
SCN8A-204ENST00000546961 TRAV23DV6A0A075B6W5 121 aa11.07□□□□□ -0.64
SCN8A-204ENST00000546961 NDUFC2O95298 119 aa11.07□□□□□ -0.64
SCN8A-204ENST00000546961 PLNP26678 52 aa11.07□□□□□ -0.64
SCN8A-204ENST00000546961 LGALS3P17931 250 aaKnown RBP11.06□□□□□ -0.64
SCN8A-204ENST00000546961 ZNF73O43830 326 aaPredicted RBP11.05□□□□□ -0.64
SCN8A-204ENST00000546961 NMUP48645 174 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms