RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 NIPBLQ6KC79 2804 aaeCLIP8.4□□□□□ -1.06
ATXN2-216ENST00000546483 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.06
ATXN2-216ENST00000546483 IGKV3OR2-268A0A0C4DH90 116 aa8.4□□□□□ -1.06
ATXN2-216ENST00000546483 RBM3P98179 157 aaKnown RBP8.4□□□□□ -1.06
ATXN2-216ENST00000546483 CUBNO60494 3623 aa8.39□□□□□ -1.07
ATXN2-216ENST00000546483 MUC7Q8TAX7 377 aa8.39□□□□□ -1.07
ATXN2-216ENST00000546483 TEP1Q99973 2627 aaKnown RBP8.39□□□□□ -1.07
ATXN2-216ENST00000546483 TRGV4A0A0C4DH28 118 aa8.39□□□□□ -1.07
ATXN2-216ENST00000546483 DNAJC9-AS1A6NH13 148 aa8.39□□□□□ -1.07
ATXN2-216ENST00000546483 NDUFC1O43677 76 aa8.39□□□□□ -1.07
ATXN2-216ENST00000546483 LINC01547P58512 204 aaPredicted RBP8.39□□□□□ -1.07
ATXN2-216ENST00000546483 PRO0628Q9UI54 55 aa8.39□□□□□ -1.07
ATXN2-216ENST00000546483 KIAA0087Q14695 138 aa8.38□□□□□ -1.07
ATXN2-216ENST00000546483 ESM1Q9NQ30 184 aa8.38□□□□□ -1.07
ATXN2-216ENST00000546483 SMIM26A0A096LP01 95 aa8.37□□□□□ -1.07
ATXN2-216ENST00000546483 ATP5EP56381 51 aaPredicted RBP8.37□□□□□ -1.07
ATXN2-216ENST00000546483 CSNK1G2-AS1Q8NCQ2 148 aa8.37□□□□□ -1.07
ATXN2-216ENST00000546483 Q6ZVQ6 151 aa8.36□□□□□ -1.07
ATXN2-216ENST00000546483 PRR3P79522 188 aaKnown RBP8.36□□□□□ -1.07
ATXN2-216ENST00000546483 C6orf99Q4VX62 202 aa8.36□□□□□ -1.07
ATXN2-216ENST00000546483 C16orf95Q9H693 158 aa8.36□□□□□ -1.07
ATXN2-216ENST00000546483 RNASE1P07998 156 aaKnown RBP8.35□□□□□ -1.07
ATXN2-216ENST00000546483 LINC00612Q8N6U2 182 aa8.34□□□□□ -1.07
ATXN2-216ENST00000546483 CD164L2Q6UWJ8 174 aa8.33□□□□□ -1.08
ATXN2-216ENST00000546483 JMJD1CQ15652 2540 aa8.33□□□□□ -1.08
ATXN2-216ENST00000546483 TRAV10A0A0B4J240 114 aa8.33□□□□□ -1.08
ATXN2-216ENST00000546483 ERC2-IT1O76042 136 aa8.33□□□□□ -1.08
ATXN2-216ENST00000546483 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
ATXN2-216ENST00000546483 C11orf68Q9H3H3 251 aaKnown RBP8.33□□□□□ -1.08
ATXN2-216ENST00000546483 TRBV7-4A0A0J9YYF1 115 aa8.32□□□□□ -1.08
ATXN2-216ENST00000546483 IGLV6-57P01721 117 aa8.32□□□□□ -1.08
ATXN2-216ENST00000546483 KHDC1LQ5JSQ8 128 aa8.32□□□□□ -1.08
ATXN2-216ENST00000546483 LINC00336Q6ZUF6 198 aa8.32□□□□□ -1.08
ATXN2-216ENST00000546483 SETD2Q9BYW2 2564 aaPredicted RBP8.32□□□□□ -1.08
ATXN2-216ENST00000546483 Q8NDZ9 215 aa8.31□□□□□ -1.08
ATXN2-216ENST00000546483 C19orf73Q9NVV2 129 aa8.31□□□□□ -1.08
ATXN2-216ENST00000546483 M0R2N4 97 aa8.31□□□□□ -1.08
ATXN2-216ENST00000546483 LAMTOR3Q9UHA4 124 aa8.3□□□□□ -1.08
ATXN2-216ENST00000546483 C2CD3Q4AC94 2353 aa8.3□□□□□ -1.08
ATXN2-216ENST00000546483 F8WEM9 126 aa8.3□□□□□ -1.08
ATXN2-216ENST00000546483 HAMPP81172 84 aa8.3□□□□□ -1.08
ATXN2-216ENST00000546483 RMI2Q96E14 147 aa8.3□□□□□ -1.08
ATXN2-216ENST00000546483 CCL24O00175 119 aa8.29□□□□□ -1.08
ATXN2-216ENST00000546483 Q8N3U1 123 aa8.29□□□□□ -1.08
ATXN2-216ENST00000546483 A0A0J9YWU9 116 aa8.28□□□□□ -1.08
ATXN2-216ENST00000546483 IGHV4-30-4P0DP06 118 aa8.28□□□□□ -1.08
ATXN2-216ENST00000546483 TRBV7-6A0A0J9YX20 115 aa8.27□□□□□ -1.09
ATXN2-216ENST00000546483 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.27□□□□□ -1.09
ATXN2-216ENST00000546483 SPATA3Q8NHX4 192 aa8.27□□□□□ -1.09
ATXN2-216ENST00000546483 SNURFQ9Y675 71 aa8.27□□□□□ -1.09
ATXN2-216ENST00000546483 GYPEP15421 78 aa8.26□□□□□ -1.09
ATXN2-216ENST00000546483 MIFP14174 115 aa8.26□□□□□ -1.09
ATXN2-216ENST00000546483 Q6ZQY7 126 aa8.26□□□□□ -1.09
ATXN2-216ENST00000546483 LINC01006Q8NI28 216 aa8.26□□□□□ -1.09
ATXN2-216ENST00000546483 CHCHD10Q8WYQ3 142 aaPredicted RBP8.26□□□□□ -1.09
ATXN2-216ENST00000546483 IGLV1-51P01701 117 aa8.25□□□□□ -1.09
ATXN2-216ENST00000546483 ATRQ13535 2644 aa8.25□□□□□ -1.09
ATXN2-216ENST00000546483 TM2D3Q9BRN9 247 aa8.25□□□□□ -1.09
ATXN2-216ENST00000546483 GVQW2A0A096LPI5 108 aaPredicted RBP8.24□□□□□ -1.09
ATXN2-216ENST00000546483 RPL35AP18077 110 aaKnown RBP8.24□□□□□ -1.09
ATXN2-216ENST00000546483 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
ATXN2-216ENST00000546483 PRO0255Q9UI72 69 aa8.24□□□□□ -1.09
ATXN2-216ENST00000546483 NREPQ16612 68 aa8.23□□□□□ -1.09
ATXN2-216ENST00000546483 LINC00269Q8N2A0 174 aa8.23□□□□□ -1.09
ATXN2-216ENST00000546483 TMEM254Q8TBM7 123 aa8.23□□□□□ -1.09
ATXN2-216ENST00000546483 REG3AQ06141 175 aa8.22□□□□□ -1.09
ATXN2-216ENST00000546483 CLPSL2Q6UWE3 100 aa8.22□□□□□ -1.09
ATXN2-216ENST00000546483 WFDC10AQ9H1F0 79 aa8.22□□□□□ -1.09
ATXN2-216ENST00000546483 DIRC1Q969H9 104 aa8.22□□□□□ -1.09
ATXN2-216ENST00000546483 CELA1Q9UNI1 258 aa8.21□□□□□ -1.1
ATXN2-216ENST00000546483 NOTCH3Q9UM47 2321 aa8.2□□□□□ -1.1
ATXN2-216ENST00000546483 BPY2O14599 106 aa8.2□□□□□ -1.1
ATXN2-216ENST00000546483 COX7BP24311 80 aa8.2□□□□□ -1.1
ATXN2-216ENST00000546483 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
ATXN2-216ENST00000546483 DEFB130BP0DP73 79 aa8.2□□□□□ -1.1
ATXN2-216ENST00000546483 DEFB130AP0DP74 79 aa8.2□□□□□ -1.1
ATXN2-216ENST00000546483 ELOF1P60002 83 aaKnown RBP8.2□□□□□ -1.1
ATXN2-216ENST00000546483 SPAG11BQ08648 103 aa8.19□□□□□ -1.1
ATXN2-216ENST00000546483 C10orf25Q5T742 122 aa8.19□□□□□ -1.1
ATXN2-216ENST00000546483 UNQ6190/PRO20217Q6UXQ8 127 aa8.19□□□□□ -1.1
ATXN2-216ENST00000546483 OCR1Q9BZK8 76 aa8.19□□□□□ -1.1
ATXN2-216ENST00000546483 LINC00474Q9P2X8 69 aa8.18□□□□□ -1.1
ATXN2-216ENST00000546483 ZNF73O43830 326 aaPredicted RBP8.18□□□□□ -1.1
ATXN2-216ENST00000546483 TENM1Q9UKZ4 2725 aa8.18□□□□□ -1.1
ATXN2-216ENST00000546483 C1orf43Q9BWL3 253 aa8.17□□□□□ -1.1
ATXN2-216ENST00000546483 ANGP03950 147 aaKnown RBP8.17□□□□□ -1.1
ATXN2-216ENST00000546483 KRTAP24-1Q3LI83 254 aa8.17□□□□□ -1.1
ATXN2-216ENST00000546483 LYRM9A8MSI8 78 aa8.16□□□□□ -1.1
ATXN2-216ENST00000546483 F8WDY8 70 aa8.16□□□□□ -1.1
ATXN2-216ENST00000546483 IGKV4-1P06312 121 aa8.16□□□□□ -1.1
ATXN2-216ENST00000546483 X6R8D5 127 aa8.16□□□□□ -1.1
ATXN2-216ENST00000546483 FBN1P35555 2871 aaKnown RBP8.16□□□□□ -1.1
ATXN2-216ENST00000546483 IGLV10-54A0A075B6I4 117 aa8.15□□□□□ -1.1
ATXN2-216ENST00000546483 PRYO14603 147 aa8.15□□□□□ -1.1
ATXN2-216ENST00000546483 PRR34Q9NV39 138 aa8.15□□□□□ -1.1
ATXN2-216ENST00000546483 KRTAP10-3P60369 221 aa8.14□□□□□ -1.11
ATXN2-216ENST00000546483 Q6ZTC4 211 aa8.14□□□□□ -1.11
ATXN2-216ENST00000546483 SCXQ7RTU7 201 aa8.14□□□□□ -1.11
ATXN2-216ENST00000546483 COL6A5A8TX70 2615 aa8.13□□□□□ -1.11
ATXN2-216ENST00000546483 A0A1B0GW54 56 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms