RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 SND1-IT1Q9HBX3 110 aa3.86□□□□□ -1.79
COPA-207ENST00000545284 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
COPA-207ENST00000545284 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
COPA-207ENST00000545284 PRYO14603 147 aa3.85□□□□□ -1.79
COPA-207ENST00000545284 IGLV6-57P01721 117 aa3.85□□□□□ -1.79
COPA-207ENST00000545284 RPL37P61927 97 aaKnown RBP3.85□□□□□ -1.79
COPA-207ENST00000545284 ZC2HC1BQ5TFG8 222 aa3.85□□□□□ -1.79
COPA-207ENST00000545284 GAGE2AQ6NT46 116 aa3.85□□□□□ -1.79
COPA-207ENST00000545284 TMEM136Q6ZRR5 245 aa3.85□□□□□ -1.79
COPA-207ENST00000545284 TIMM17AQ99595 171 aa3.85□□□□□ -1.79
COPA-207ENST00000545284 SMIM7Q9BQ49 75 aa3.85□□□□□ -1.79
COPA-207ENST00000545284 MRPL18Q9H0U6 180 aaKnown RBP3.85□□□□□ -1.79
COPA-207ENST00000545284 SMIM27A0A1W2PRY6 76 aa3.84□□□□□ -1.79
COPA-207ENST00000545284 C9orf92A6NGG3 77 aa3.84□□□□□ -1.79
COPA-207ENST00000545284 PFN2P35080 140 aa3.84□□□□□ -1.79
COPA-207ENST00000545284 SFTA2Q6UW10 78 aa3.84□□□□□ -1.79
COPA-207ENST00000545284 PRELID3AQ96N28 172 aa3.84□□□□□ -1.79
COPA-207ENST00000545284 KCNQ1DNQ9H478 68 aa3.84□□□□□ -1.79
COPA-207ENST00000545284 LINC01549A6NIU2 74 aa3.83□□□□□ -1.8
COPA-207ENST00000545284 RAB14P61106 215 aa3.83□□□□□ -1.8
COPA-207ENST00000545284 Q8N8P6 123 aa3.83□□□□□ -1.8
COPA-207ENST00000545284 MAP1LC3AQ9H492 121 aa3.83□□□□□ -1.8
COPA-207ENST00000545284 ERG28Q9UKR5 140 aa3.83□□□□□ -1.8
COPA-207ENST00000545284 ETDCA0A1B0GVM5 59 aa3.82□□□□□ -1.8
COPA-207ENST00000545284 A0A1B0GXF2 115 aa3.82□□□□□ -1.8
COPA-207ENST00000545284 SMLR1H3BR10 107 aa3.82□□□□□ -1.8
COPA-207ENST00000545284 H3BRM9 83 aa3.82□□□□□ -1.8
COPA-207ENST00000545284 S100A12P80511 92 aa3.82□□□□□ -1.8
COPA-207ENST00000545284 TRAV9-1A0A075B6T8 112 aa3.81□□□□□ -1.8
COPA-207ENST00000545284 LOC389332A0A1B0GUA5 103 aa3.81□□□□□ -1.8
COPA-207ENST00000545284 CEBPGP53567 150 aa3.81□□□□□ -1.8
COPA-207ENST00000545284 BLOC1S1P78537 153 aa3.81□□□□□ -1.8
COPA-207ENST00000545284 ALKAL2Q6UX46 152 aa3.81□□□□□ -1.8
COPA-207ENST00000545284 ERASQ7Z444 233 aa3.81□□□□□ -1.8
COPA-207ENST00000545284 ATP5L2Q7Z4Y8 100 aa3.81□□□□□ -1.8
COPA-207ENST00000545284 IGLV5-39A0A0G2JS06 123 aa3.8□□□□□ -1.8
COPA-207ENST00000545284 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
COPA-207ENST00000545284 TMEM238LA0A1B0GVL6 79 aa3.8□□□□□ -1.8
COPA-207ENST00000545284 C5orf52A6NGY3 159 aa3.8□□□□□ -1.8
COPA-207ENST00000545284 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
COPA-207ENST00000545284 SLC51BQ86UW2 128 aa3.8□□□□□ -1.8
COPA-207ENST00000545284 Q8NDZ9 215 aa3.8□□□□□ -1.8
COPA-207ENST00000545284 TOMM6Q96B49 74 aa3.8□□□□□ -1.8
COPA-207ENST00000545284 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
COPA-207ENST00000545284 NXT2Q9NPJ8 142 aaKnown RBP3.8□□□□□ -1.8
COPA-207ENST00000545284 SPINK8P0C7L1 97 aa3.79□□□□□ -1.8
COPA-207ENST00000545284 C9orf153Q5TBE3 101 aa3.79□□□□□ -1.8
COPA-207ENST00000545284 MRPL54Q6P161 138 aaKnown RBP3.79□□□□□ -1.8
COPA-207ENST00000545284 Q6Q795 121 aa3.79□□□□□ -1.8
COPA-207ENST00000545284 KRTAP9-3Q9BYQ3 159 aa3.79□□□□□ -1.8
COPA-207ENST00000545284 C20orf202A1L168 122 aa3.78□□□□□ -1.8
COPA-207ENST00000545284 B5MCH6 92 aa3.78□□□□□ -1.8
COPA-207ENST00000545284 CD164Q04900 197 aa3.78□□□□□ -1.8
COPA-207ENST00000545284 Q5XG85 94 aa3.78□□□□□ -1.8
COPA-207ENST00000545284 CST9LQ9H4G1 147 aa3.78□□□□□ -1.8
COPA-207ENST00000545284 RPL23P62829 140 aaKnown RBP3.77□□□□□ -1.81
COPA-207ENST00000545284 KIAA1644Q3SXP7 199 aa3.77□□□□□ -1.81
COPA-207ENST00000545284 SLC25A34Q6PIV7 304 aa3.77□□□□□ -1.81
COPA-207ENST00000545284 SCGB3A1Q96QR1 104 aa3.77□□□□□ -1.81
COPA-207ENST00000545284 ERC2-IT1O76042 136 aa3.76□□□□□ -1.81
COPA-207ENST00000545284 MT2AP02795 61 aa3.76□□□□□ -1.81
COPA-207ENST00000545284 SRP19P09132 144 aaKnown RBP3.76□□□□□ -1.81
COPA-207ENST00000545284 JOSD1Q15040 202 aaPredicted RBP3.76□□□□□ -1.81
COPA-207ENST00000545284 PMVKQ15126 192 aa3.76□□□□□ -1.81
COPA-207ENST00000545284 Q6ZRX8 168 aa3.76□□□□□ -1.81
COPA-207ENST00000545284 FA2HQ7L5A8 372 aa3.76□□□□□ -1.81
COPA-207ENST00000545284 NAT8Q9UHE5 227 aa3.76□□□□□ -1.81
COPA-207ENST00000545284 LINC00158P58513 81 aa3.75□□□□□ -1.81
COPA-207ENST00000545284 ADIRFQ15847 76 aa3.75□□□□□ -1.81
COPA-207ENST00000545284 C10orf91Q5T1B1 145 aa3.75□□□□□ -1.81
COPA-207ENST00000545284 Q9BRP9 147 aa3.75□□□□□ -1.81
COPA-207ENST00000545284 TRBV10-3A0A0K0K1G6 114 aa3.74□□□□□ -1.81
COPA-207ENST00000545284 IGLC3P0DOY3 106 aa3.74□□□□□ -1.81
COPA-207ENST00000545284 C21orf62-AS1Q17RA5 79 aa3.74□□□□□ -1.81
COPA-207ENST00000545284 RGS21Q2M5E4 152 aa3.74□□□□□ -1.81
COPA-207ENST00000545284 ATP11AUNQ6ZP68 121 aa3.74□□□□□ -1.81
COPA-207ENST00000545284 BOD1L2Q8IYS8 172 aa3.74□□□□□ -1.81
COPA-207ENST00000545284 ZNF625Q96I27 306 aaPredicted RBP3.74□□□□□ -1.81
COPA-207ENST00000545284 LINC00587B1AMM8 73 aa3.73□□□□□ -1.81
COPA-207ENST00000545284 ATP6V1G1O75348 118 aa3.73□□□□□ -1.81
COPA-207ENST00000545284 SPRR1BP22528 89 aa3.73□□□□□ -1.81
COPA-207ENST00000545284 TRBV10-2A0A0K0K1G8 114 aa3.72□□□□□ -1.81
COPA-207ENST00000545284 MT1FP04733 61 aa3.72□□□□□ -1.81
COPA-207ENST00000545284 ADCYAP1P18509 176 aa3.72□□□□□ -1.81
COPA-207ENST00000545284 KRTAP10-10P60014 251 aa3.72□□□□□ -1.81
COPA-207ENST00000545284 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
COPA-207ENST00000545284 C1orf195Q5TG92 126 aa3.72□□□□□ -1.81
COPA-207ENST00000545284 TRBV20-1A0A075B6N2 111 aa3.71□□□□□ -1.82
COPA-207ENST00000545284 ZNF22P17026 224 aaPredicted RBP3.71□□□□□ -1.82
COPA-207ENST00000545284 HRCT1Q6UXD1 115 aa3.71□□□□□ -1.82
COPA-207ENST00000545284 LAMTOR3Q9UHA4 124 aa3.71□□□□□ -1.82
COPA-207ENST00000545284 LOC107984156A0A0G2JMH3 177 aa3.7□□□□□ -1.82
COPA-207ENST00000545284 LINC01546A6NGU7 62 aa3.7□□□□□ -1.82
COPA-207ENST00000545284 H7C2G1 150 aa3.7□□□□□ -1.82
COPA-207ENST00000545284 NCR3O14931 201 aa3.7□□□□□ -1.82
COPA-207ENST00000545284 DDTP30046 118 aa3.7□□□□□ -1.82
COPA-207ENST00000545284 C6orf99Q4VX62 202 aa3.7□□□□□ -1.82
COPA-207ENST00000545284 Q75L30 129 aa3.7□□□□□ -1.82
COPA-207ENST00000545284 ARL17AQ8IVW1 177 aa3.7□□□□□ -1.82
COPA-207ENST00000545284 PRO1933Q9H354 126 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms