RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 TLN2Q9Y4G6 2542 aa13.3□□□□□ -0.28
LYSMD4-210ENST00000545021 C9orf66Q5T8R8 295 aa13.3□□□□□ -0.28
LYSMD4-210ENST00000545021 TRGV1A0A0A0MS02 117 aa13.29□□□□□ -0.28
LYSMD4-210ENST00000545021 ESRGQ1W209 222 aa13.29□□□□□ -0.28
LYSMD4-210ENST00000545021 LINC00575Q6W349 94 aa13.29□□□□□ -0.28
LYSMD4-210ENST00000545021 C11orf68Q9H3H3 251 aaKnown RBP13.29□□□□□ -0.28
LYSMD4-210ENST00000545021 IGKV3OR2-268A0A0C4DH90 116 aa13.28□□□□□ -0.28
LYSMD4-210ENST00000545021 C11orf44Q8N8P7 122 aa13.28□□□□□ -0.28
LYSMD4-210ENST00000545021 C6orf226Q5I0X4 101 aa13.27□□□□□ -0.29
LYSMD4-210ENST00000545021 LAMTOR3Q9UHA4 124 aa13.27□□□□□ -0.29
LYSMD4-210ENST00000545021 PLAC8L1A1L4L8 177 aa13.27□□□□□ -0.29
LYSMD4-210ENST00000545021 C10orf99Q6UWK7 81 aa13.27□□□□□ -0.29
LYSMD4-210ENST00000545021 PRR15Q8IV56 129 aa13.27□□□□□ -0.29
LYSMD4-210ENST00000545021 NIPBLQ6KC79 2804 aaeCLIP13.25□□□□□ -0.29
LYSMD4-210ENST00000545021 PRR3P79522 188 aaKnown RBP13.25□□□□□ -0.29
LYSMD4-210ENST00000545021 C6orf99Q4VX62 202 aa13.25□□□□□ -0.29
LYSMD4-210ENST00000545021 IGLV4-60A0A075B6I1 120 aa13.24□□□□□ -0.29
LYSMD4-210ENST00000545021 SONP18583 2426 aaKnown RBP13.24□□□□□ -0.29
LYSMD4-210ENST00000545021 BPY2O14599 106 aa13.23□□□□□ -0.29
LYSMD4-210ENST00000545021 PRYO14603 147 aa13.23□□□□□ -0.29
LYSMD4-210ENST00000545021 Q6YL49 198 aa13.23□□□□□ -0.29
LYSMD4-210ENST00000545021 ESM1Q9NQ30 184 aa13.23□□□□□ -0.29
LYSMD4-210ENST00000545021 PMAIP1Q13794 54 aa13.22□□□□□ -0.29
LYSMD4-210ENST00000545021 DYNLRB2Q8TF09 96 aa13.22□□□□□ -0.29
LYSMD4-210ENST00000545021 DNAJC9-AS1A6NH13 148 aa13.22□□□□□ -0.29
LYSMD4-210ENST00000545021 FUSP35637 526 aaKnown RBP eCLIP13.22□□□□□ -0.29
LYSMD4-210ENST00000545021 Q8IZM0 81 aa13.22□□□□□ -0.29
LYSMD4-210ENST00000545021 C1orf158Q8N1D5 194 aa13.22□□□□□ -0.29
LYSMD4-210ENST00000545021 MAP6D1Q9H9H5 199 aa13.22□□□□□ -0.29
LYSMD4-210ENST00000545021 H3BQ85 93 aa13.21□□□□□ -0.29
LYSMD4-210ENST00000545021 Q6ZTC4 211 aa13.21□□□□□ -0.3
LYSMD4-210ENST00000545021 Q6ZRU5 148 aa13.2□□□□□ -0.3
LYSMD4-210ENST00000545021 MUC7Q8TAX7 377 aa13.19□□□□□ -0.3
LYSMD4-210ENST00000545021 DEFB112Q30KQ8 113 aa13.19□□□□□ -0.3
LYSMD4-210ENST00000545021 LINC00959A0A1B0GUT2 108 aa13.18□□□□□ -0.3
LYSMD4-210ENST00000545021 SCXQ7RTU7 201 aa13.18□□□□□ -0.3
LYSMD4-210ENST00000545021 COX17Q14061 63 aa13.17□□□□□ -0.3
LYSMD4-210ENST00000545021 TRBV6-8A0A0A6YYG3 113 aa13.15□□□□□ -0.3
LYSMD4-210ENST00000545021 OCR1Q9BZK8 76 aa13.15□□□□□ -0.3
LYSMD4-210ENST00000545021 UBE2E2Q96LR5 201 aa13.14□□□□□ -0.31
LYSMD4-210ENST00000545021 LOC100131303A0A0U1RQF7 123 aa13.14□□□□□ -0.31
LYSMD4-210ENST00000545021 Q6ZQY7 126 aa13.12□□□□□ -0.31
LYSMD4-210ENST00000545021 JMJD1CQ15652 2540 aa13.11□□□□□ -0.31
LYSMD4-210ENST00000545021 SLURP1P55000 103 aa13.11□□□□□ -0.31
LYSMD4-210ENST00000545021 Q1T7F1 81 aa13.1□□□□□ -0.31
LYSMD4-210ENST00000545021 FBN1P35555 2871 aaKnown RBP13.1□□□□□ -0.31
LYSMD4-210ENST00000545021 hDV103S1A0JD37 113 aa13.09□□□□□ -0.31
LYSMD4-210ENST00000545021 Q8NDZ9 215 aa13.09□□□□□ -0.31
LYSMD4-210ENST00000545021 MXRA5Q9NR99 2828 aa13.09□□□□□ -0.31
LYSMD4-210ENST00000545021 CD164L2Q6UWJ8 174 aa13.08□□□□□ -0.32
LYSMD4-210ENST00000545021 NOP10Q9NPE3 64 aaKnown RBP13.08□□□□□ -0.32
LYSMD4-210ENST00000545021 IGKV4-1P06312 121 aa13.07□□□□□ -0.32
LYSMD4-210ENST00000545021 IGHV4-59P01825 116 aa13.07□□□□□ -0.32
LYSMD4-210ENST00000545021 ANK2Q01484 3957 aa13.06□□□□□ -0.32
LYSMD4-210ENST00000545021 IGHV4-28A0A0C4DH34 117 aa13.06□□□□□ -0.32
LYSMD4-210ENST00000545021 KIAA0087Q14695 138 aa13.05□□□□□ -0.32
LYSMD4-210ENST00000545021 HIGD2AQ9BW72 106 aa13.05□□□□□ -0.32
LYSMD4-210ENST00000545021 STHQ8IWL8 128 aa13.04□□□□□ -0.32
LYSMD4-210ENST00000545021 ATRQ13535 2644 aa13.04□□□□□ -0.32
LYSMD4-210ENST00000545021 TRGV2A0A075B6R0 118 aa13.04□□□□□ -0.32
LYSMD4-210ENST00000545021 IGLV6-57P01721 117 aa13.03□□□□□ -0.32
LYSMD4-210ENST00000545021 DEFB136Q30KP8 78 aa13.03□□□□□ -0.32
LYSMD4-210ENST00000545021 Q6ZRP5 223 aa13.03□□□□□ -0.32
LYSMD4-210ENST00000545021 TRGV4A0A0C4DH28 118 aa13.02□□□□□ -0.32
LYSMD4-210ENST00000545021 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.02□□□□□ -0.32
LYSMD4-210ENST00000545021 DNHD1Q96M86 4753 aa13.02□□□□□ -0.32
LYSMD4-210ENST00000545021 COX7BP24311 80 aa13.02□□□□□ -0.33
LYSMD4-210ENST00000545021 DEFB114Q30KQ6 69 aa13.02□□□□□ -0.33
LYSMD4-210ENST00000545021 ODF3L2Q3SX64 289 aa13.02□□□□□ -0.33
LYSMD4-210ENST00000545021 CD164Q04900 197 aa13.01□□□□□ -0.33
LYSMD4-210ENST00000545021 DAD1P61803 113 aa13.01□□□□□ -0.33
LYSMD4-210ENST00000545021 Q8N9L7 120 aa13.01□□□□□ -0.33
LYSMD4-210ENST00000545021 COL6A5A8TX70 2615 aa13□□□□□ -0.33
LYSMD4-210ENST00000545021 C18orf65Q6ZTR6 163 aa13□□□□□ -0.33
LYSMD4-210ENST00000545021 A0A1B0GUV1 79 aa12.99□□□□□ -0.33
LYSMD4-210ENST00000545021 C9orf116Q5BN46 136 aaPredicted RBP12.99□□□□□ -0.33
LYSMD4-210ENST00000545021 LINC01006Q8NI28 216 aa12.99□□□□□ -0.33
LYSMD4-210ENST00000545021 C16orf74Q96GX8 76 aa12.99□□□□□ -0.33
LYSMD4-210ENST00000545021 KHDC1LQ5JSQ8 128 aa12.97□□□□□ -0.33
LYSMD4-210ENST00000545021 LCE6AA0A183 80 aa12.97□□□□□ -0.33
LYSMD4-210ENST00000545021 CCL24O00175 119 aa12.97□□□□□ -0.33
LYSMD4-210ENST00000545021 C1orf64Q8NEQ6 169 aa12.96□□□□□ -0.33
LYSMD4-210ENST00000545021 ZNF702PQ9H963 129 aa12.96□□□□□ -0.34
LYSMD4-210ENST00000545021 DIRC1Q969H9 104 aa12.95□□□□□ -0.34
LYSMD4-210ENST00000545021 LINC00269Q8N2A0 174 aa12.94□□□□□ -0.34
LYSMD4-210ENST00000545021 CLPSL2Q6UWE3 100 aa12.93□□□□□ -0.34
LYSMD4-210ENST00000545021 CUBNO60494 3623 aa12.92□□□□□ -0.34
LYSMD4-210ENST00000545021 LRCOL1A6NCL2 159 aa12.91□□□□□ -0.34
LYSMD4-210ENST00000545021 TRAV22A0A0B4J277 110 aa12.91□□□□□ -0.34
LYSMD4-210ENST00000545021 KRTAP10-3P60369 221 aa12.9□□□□□ -0.34
LYSMD4-210ENST00000545021 PSPHP1O15172 72 aa12.89□□□□□ -0.35
LYSMD4-210ENST00000545021 C4orf3Q8WVX3 66 aa12.89□□□□□ -0.35
LYSMD4-210ENST00000545021 LINC00612Q8N6U2 182 aa12.89□□□□□ -0.35
LYSMD4-210ENST00000545021 ELOF1P60002 83 aaKnown RBP12.88□□□□□ -0.35
LYSMD4-210ENST00000545021 CELA1Q9UNI1 258 aa12.88□□□□□ -0.35
LYSMD4-210ENST00000545021 GIG44P09565 113 aaPredicted RBP12.88□□□□□ -0.35
LYSMD4-210ENST00000545021 IGHV4-30-4P0DP06 118 aa12.88□□□□□ -0.35
LYSMD4-210ENST00000545021 ZCCHC13Q8WW36 166 aaKnown RBP12.88□□□□□ -0.35
LYSMD4-210ENST00000545021 CHCHD10Q8WYQ3 142 aaPredicted RBP12.87□□□□□ -0.35
LYSMD4-210ENST00000545021 ZNF73O43830 326 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms