RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TRAV23DV6A0A075B6W5 121 aa8.78□□□□□ -1
CPSF7-223ENST00000544669 C10orf25Q5T742 122 aa8.78□□□□□ -1
CPSF7-223ENST00000544669 SPATA3Q8NHX4 192 aa8.78□□□□□ -1
CPSF7-223ENST00000544669 CAMK2N2Q96S95 79 aa8.78□□□□□ -1
CPSF7-223ENST00000544669 DSCR8Q96T75 97 aa8.78□□□□□ -1
CPSF7-223ENST00000544669 KPRPQ5T749 579 aaPredicted RBP8.77□□□□□ -1
CPSF7-223ENST00000544669 Q8N3U1 123 aa8.77□□□□□ -1
CPSF7-223ENST00000544669 LAMTOR3Q9UHA4 124 aa8.77□□□□□ -1
CPSF7-223ENST00000544669 ANK3Q12955 4377 aaKnown RBP8.77□□□□□ -1.01
CPSF7-223ENST00000544669 BCE1O60756 84 aa8.77□□□□□ -1.01
CPSF7-223ENST00000544669 CRYGAP11844 174 aa8.77□□□□□ -1.01
CPSF7-223ENST00000544669 C6orf48Q9UBA6 75 aa8.77□□□□□ -1.01
CPSF7-223ENST00000544669 M0R378 163 aa8.76□□□□□ -1.01
CPSF7-223ENST00000544669 COX7BP24311 80 aa8.75□□□□□ -1.01
CPSF7-223ENST00000544669 SERP2Q8N6R1 65 aa8.75□□□□□ -1.01
CPSF7-223ENST00000544669 JMJD1CQ15652 2540 aa8.75□□□□□ -1.01
CPSF7-223ENST00000544669 IGKV3D-7A0A0C4DH55 119 aa8.75□□□□□ -1.01
CPSF7-223ENST00000544669 ZNF73O43830 326 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-223ENST00000544669 C1orf43Q9BWL3 253 aa8.75□□□□□ -1.01
CPSF7-223ENST00000544669 ZNF469Q96JG9 3925 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-223ENST00000544669 NDUFC2-KCTD14E9PQ53 114 aa8.74□□□□□ -1.01
CPSF7-223ENST00000544669 Q6ZQT0 140 aa8.74□□□□□ -1.01
CPSF7-223ENST00000544669 LINC01556Q5JQF7 62 aa8.73□□□□□ -1.01
CPSF7-223ENST00000544669 ACANP16112 2415 aa8.73□□□□□ -1.01
CPSF7-223ENST00000544669 ELOF1P60002 83 aaKnown RBP8.73□□□□□ -1.01
CPSF7-223ENST00000544669 NF1P21359 2839 aa8.72□□□□□ -1.01
CPSF7-223ENST00000544669 USP17L23D6RBM5 183 aa8.72□□□□□ -1.01
CPSF7-223ENST00000544669 SMIM20Q8N5G0 67 aa8.72□□□□□ -1.01
CPSF7-223ENST00000544669 Q6ZQY7 126 aa8.71□□□□□ -1.01
CPSF7-223ENST00000544669 Q8NDZ9 215 aa8.71□□□□□ -1.01
CPSF7-223ENST00000544669 MTORP42345 2549 aa8.71□□□□□ -1.02
CPSF7-223ENST00000544669 WFDC10BQ8IUB3 73 aa8.7□□□□□ -1.02
CPSF7-223ENST00000544669 UNC79Q9P2D8 2635 aa8.7□□□□□ -1.02
CPSF7-223ENST00000544669 VPREB1P12018 145 aa8.7□□□□□ -1.02
CPSF7-223ENST00000544669 KRTAP26-1Q6PEX3 210 aa8.7□□□□□ -1.02
CPSF7-223ENST00000544669 CXCL6P80162 114 aa8.69□□□□□ -1.02
CPSF7-223ENST00000544669 Q6ZTC4 211 aa8.68□□□□□ -1.02
CPSF7-223ENST00000544669 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
CPSF7-223ENST00000544669 XAGE1AQ9HD64 81 aa8.68□□□□□ -1.02
CPSF7-223ENST00000544669 TENM4Q6N022 2769 aa8.68□□□□□ -1.02
CPSF7-223ENST00000544669 SETD2Q9BYW2 2564 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-223ENST00000544669 DEFB131BA0A096LNP1 70 aa8.67□□□□□ -1.02
CPSF7-223ENST00000544669 SYCNQ0VAF6 134 aa8.67□□□□□ -1.02
CPSF7-223ENST00000544669 ESRGQ1W209 222 aa8.67□□□□□ -1.02
CPSF7-223ENST00000544669 HIGD2BQ4VC39 106 aa8.66□□□□□ -1.02
CPSF7-223ENST00000544669 Q6ZRU5 148 aa8.66□□□□□ -1.02
CPSF7-223ENST00000544669 RMI2Q96E14 147 aa8.66□□□□□ -1.02
CPSF7-223ENST00000544669 TRBV7-4A0A0J9YYF1 115 aa8.66□□□□□ -1.02
CPSF7-223ENST00000544669 DNAH10OSP0CZ25 163 aa8.66□□□□□ -1.02
CPSF7-223ENST00000544669 TMEM258P61165 79 aa8.66□□□□□ -1.02
CPSF7-223ENST00000544669 RPS28P62857 69 aaKnown RBP8.66□□□□□ -1.02
CPSF7-223ENST00000544669 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
CPSF7-223ENST00000544669 C15orf56Q8N910 161 aa8.66□□□□□ -1.02
CPSF7-223ENST00000544669 UPK3BQ9BT76 320 aa8.66□□□□□ -1.02
CPSF7-223ENST00000544669 PLA2G2DQ9UNK4 145 aa8.66□□□□□ -1.02
CPSF7-223ENST00000544669 A0A1B0GW54 56 aa8.65□□□□□ -1.02
CPSF7-223ENST00000544669 TLX1NBP0CAT3 122 aa8.65□□□□□ -1.02
CPSF7-223ENST00000544669 C3orf56Q8N813 242 aa8.65□□□□□ -1.02
CPSF7-223ENST00000544669 IGKV2D-24A0A075B6R9 120 aa8.64□□□□□ -1.03
CPSF7-223ENST00000544669 KRTAP10-11P60412 298 aa8.64□□□□□ -1.03
CPSF7-223ENST00000544669 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
CPSF7-223ENST00000544669 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
CPSF7-223ENST00000544669 FN1P02751 2386 aaKnown RBP8.63□□□□□ -1.03
CPSF7-223ENST00000544669 A0A087WVE0 104 aa8.63□□□□□ -1.03
CPSF7-223ENST00000544669 Q6ZVQ6 151 aa8.63□□□□□ -1.03
CPSF7-223ENST00000544669 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
CPSF7-223ENST00000544669 KMT2BQ9UMN6 2715 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-223ENST00000544669 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
CPSF7-223ENST00000544669 LINC01547P58512 204 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-223ENST00000544669 KCNQ1DNQ9H478 68 aa8.62□□□□□ -1.03
CPSF7-223ENST00000544669 ITPR2Q14571 2701 aa8.62□□□□□ -1.03
CPSF7-223ENST00000544669 DHRS4-AS1Q9P1J3 65 aa8.61□□□□□ -1.03
CPSF7-223ENST00000544669 J3KT08 172 aa8.61□□□□□ -1.03
CPSF7-223ENST00000544669 HAMPP81172 84 aa8.61□□□□□ -1.03
CPSF7-223ENST00000544669 RETNQ9HD89 108 aa8.61□□□□□ -1.03
CPSF7-223ENST00000544669 FASNP49327 2511 aaKnown RBP8.6□□□□□ -1.03
CPSF7-223ENST00000544669 LOC107984640A0A0U1RRK4 108 aa8.6□□□□□ -1.03
CPSF7-223ENST00000544669 NBPF19A0A087WUL8 3843 aa8.6□□□□□ -1.03
CPSF7-223ENST00000544669 TRAV7A0A075B6U4 112 aa8.59□□□□□ -1.03
CPSF7-223ENST00000544669 MRAPQ8TCY5 172 aa8.59□□□□□ -1.03
CPSF7-223ENST00000544669 Q6ZRP5 223 aa8.59□□□□□ -1.03
CPSF7-223ENST00000544669 IGLV5-37A0A075B6J1 123 aa8.58□□□□□ -1.04
CPSF7-223ENST00000544669 FAM19A1Q7Z5A9 133 aa8.58□□□□□ -1.04
CPSF7-223ENST00000544669 CUBNO60494 3623 aa8.58□□□□□ -1.04
CPSF7-223ENST00000544669 NOTCH2Q04721 2471 aa8.57□□□□□ -1.04
CPSF7-223ENST00000544669 PRYO14603 147 aa8.57□□□□□ -1.04
CPSF7-223ENST00000544669 NIPBLQ6KC79 2804 aaeCLIP8.57□□□□□ -1.04
CPSF7-223ENST00000544669 HELZ2Q9BYK8 2649 aaKnown RBP8.57□□□□□ -1.04
CPSF7-223ENST00000544669 KRTAP24-1Q3LI83 254 aa8.54□□□□□ -1.04
CPSF7-223ENST00000544669 GCN1Q92616 2671 aaKnown RBP8.54□□□□□ -1.04
CPSF7-223ENST00000544669 C7orf33Q8WU49 177 aa8.53□□□□□ -1.04
CPSF7-223ENST00000544669 NREPQ16612 68 aa8.52□□□□□ -1.04
CPSF7-223ENST00000544669 IGLV5-48A0A075B6I7 105 aa8.52□□□□□ -1.05
CPSF7-223ENST00000544669 NDUFC1O43677 76 aa8.52□□□□□ -1.05
CPSF7-223ENST00000544669 FUSP35637 526 aaKnown RBP eCLIP8.52□□□□□ -1.05
CPSF7-223ENST00000544669 ETDCA0A1B0GVM5 59 aa8.51□□□□□ -1.05
CPSF7-223ENST00000544669 Q6ZRX8 168 aa8.51□□□□□ -1.05
CPSF7-223ENST00000544669 SPRR1AP35321 89 aa8.5□□□□□ -1.05
CPSF7-223ENST00000544669 TM2D3Q9BRN9 247 aa8.5□□□□□ -1.05
CPSF7-223ENST00000544669 NSD1Q96L73 2696 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms