RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 PKIGQ9Y2B9 76 aa4.33□□□□□ -1.72
CDCA3-209ENST00000544610 SRRM2Q9UQ35 2752 aaKnown RBP4.33□□□□□ -1.72
CDCA3-209ENST00000544610 IGKV2D-26A0A0A0MRZ7 120 aa4.32□□□□□ -1.72
CDCA3-209ENST00000544610 IGKV3OR2-268A0A0C4DH90 116 aa4.32□□□□□ -1.72
CDCA3-209ENST00000544610 PRSS2P07478 247 aa4.32□□□□□ -1.72
CDCA3-209ENST00000544610 CIRBPQ14011 172 aaKnown RBP4.32□□□□□ -1.72
CDCA3-209ENST00000544610 KIAA0087Q14695 138 aa4.32□□□□□ -1.72
CDCA3-209ENST00000544610 TAL2Q16559 108 aa4.32□□□□□ -1.72
CDCA3-209ENST00000544610 COX7B2Q8TF08 81 aa4.32□□□□□ -1.72
CDCA3-209ENST00000544610 NDUFA12Q9UI09 145 aa4.32□□□□□ -1.72
CDCA3-209ENST00000544610 FAT3Q8TDW7 4589 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 IGKV2D-24A0A075B6R9 120 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 TRBV30A0A0K0K1B3 111 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 ZNF815PA8K554 130 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 TMEM238C9JI98 176 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 SPINK8P0C7L1 97 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 HAMPP81172 84 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 MAJINQ3KP22 176 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 C6orf226Q5I0X4 101 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 CLPSL2Q6UWE3 100 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 C5orf38Q86SI9 138 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 NTN5Q8WTR8 489 aaPredicted RBP4.31□□□□□ -1.72
CDCA3-209ENST00000544610 SPANXB1Q9NS25 103 aaPredicted RBP4.31□□□□□ -1.72
CDCA3-209ENST00000544610 TP73-AS1Q9UF72 201 aa4.31□□□□□ -1.72
CDCA3-209ENST00000544610 LRP1Q07954 4544 aaKnown RBP4.3□□□□□ -1.72
CDCA3-209ENST00000544610 IGLV10-54A0A075B6I4 117 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 IGLV5-52A0A0A0MRZ9 124 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 LOC107984156A0A0G2JMH3 177 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 LRCOL1A6NCL2 159 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 IFITM1P13164 125 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 DDTP30046 118 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 CKS1BP61024 79 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 PCP2Q8IVA1 136 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 ARL17AQ8IVW1 177 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 ORAOV1Q8WV07 137 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 C14orf144Q96I85 54 aa4.3□□□□□ -1.72
CDCA3-209ENST00000544610 TSPEAR-AS2P59090 65 aa4.29□□□□□ -1.72
CDCA3-209ENST00000544610 CNBPP62633 177 aaKnown RBP4.29□□□□□ -1.72
CDCA3-209ENST00000544610 SPAG11BQ08648 103 aa4.29□□□□□ -1.72
CDCA3-209ENST00000544610 UBE2V1Q13404 147 aa4.29□□□□□ -1.72
CDCA3-209ENST00000544610 SCGB1D4Q6XE38 83 aa4.29□□□□□ -1.72
CDCA3-209ENST00000544610 Q8N814 137 aa4.29□□□□□ -1.72
CDCA3-209ENST00000544610 C15orf56Q8N910 161 aa4.29□□□□□ -1.72
CDCA3-209ENST00000544610 SPANXDQ9BXN6 97 aa4.29□□□□□ -1.72
CDCA3-209ENST00000544610 Q9HAA7 133 aa4.29□□□□□ -1.72
CDCA3-209ENST00000544610 SPANXCQ9NY87 97 aa4.29□□□□□ -1.72
CDCA3-209ENST00000544610 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.28□□□□□ -1.72
CDCA3-209ENST00000544610 M0R143 59 aa4.28□□□□□ -1.72
CDCA3-209ENST00000544610 PSCAO43653 123 aa4.28□□□□□ -1.72
CDCA3-209ENST00000544610 TLX1NBP0CAT3 122 aa4.28□□□□□ -1.72
CDCA3-209ENST00000544610 HNRNPA3P51991 378 aaKnown RBP4.28□□□□□ -1.72
CDCA3-209ENST00000544610 HSD52Q0P140 79 aa4.28□□□□□ -1.72
CDCA3-209ENST00000544610 C2orf91Q6ZV80 131 aa4.28□□□□□ -1.72
CDCA3-209ENST00000544610 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
CDCA3-209ENST00000544610 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
CDCA3-209ENST00000544610 LBHQ53QV2 105 aaPredicted RBP4.27□□□□□ -1.73
CDCA3-209ENST00000544610 MEIG1Q5JSS6 88 aa4.27□□□□□ -1.73
CDCA3-209ENST00000544610 Q6ZSA8 131 aa4.27□□□□□ -1.73
CDCA3-209ENST00000544610 TOMM7Q9P0U1 55 aa4.27□□□□□ -1.73
CDCA3-209ENST00000544610 NDUFC2-KCTD14E9PQ53 114 aa4.26□□□□□ -1.73
CDCA3-209ENST00000544610 RPL24P83731 157 aaKnown RBP4.26□□□□□ -1.73
CDCA3-209ENST00000544610 CAMK2N2Q96S95 79 aa4.26□□□□□ -1.73
CDCA3-209ENST00000544610 LITAFQ99732 161 aa4.26□□□□□ -1.73
CDCA3-209ENST00000544610 PRO1933Q9H354 126 aa4.26□□□□□ -1.73
CDCA3-209ENST00000544610 ERG28Q9UKR5 140 aa4.26□□□□□ -1.73
CDCA3-209ENST00000544610 NDUFC2O95298 119 aa4.25□□□□□ -1.73
CDCA3-209ENST00000544610 SRSF9Q13242 221 aaKnown RBP eCLIP4.25□□□□□ -1.73
CDCA3-209ENST00000544610 CARD19Q96LW7 228 aa4.25□□□□□ -1.73
CDCA3-209ENST00000544610 HIST1H4GQ99525 98 aa4.25□□□□□ -1.73
CDCA3-209ENST00000544610 TTTY13Q9BZ97 58 aa4.25□□□□□ -1.73
CDCA3-209ENST00000544610 FLG2Q5D862 2391 aaPredicted RBP4.25□□□□□ -1.73
CDCA3-209ENST00000544610 PKHD1L1Q86WI1 4243 aa4.25□□□□□ -1.73
CDCA3-209ENST00000544610 A0A1B0GWB2 263 aa4.24□□□□□ -1.73
CDCA3-209ENST00000544610 GAGE2BQ13066 116 aa4.24□□□□□ -1.73
CDCA3-209ENST00000544610 WFDC2Q14508 124 aa4.24□□□□□ -1.73
CDCA3-209ENST00000544610 GAGE2EQ4V326 116 aa4.24□□□□□ -1.73
CDCA3-209ENST00000544610 GAGE2AQ6NT46 116 aa4.24□□□□□ -1.73
CDCA3-209ENST00000544610 UNQ6190/PRO20217Q6UXQ8 127 aa4.24□□□□□ -1.73
CDCA3-209ENST00000544610 CEND1Q8N111 149 aa4.24□□□□□ -1.73
CDCA3-209ENST00000544610 LINC00474Q9P2X8 69 aa4.24□□□□□ -1.73
CDCA3-209ENST00000544610 GAGE2DQ9UEU5 116 aa4.24□□□□□ -1.73
CDCA3-209ENST00000544610 A6NDN8 102 aa4.23□□□□□ -1.73
CDCA3-209ENST00000544610 LINC00158P58513 81 aa4.23□□□□□ -1.73
CDCA3-209ENST00000544610 KRTAP10-4P60372 401 aaPredicted RBP4.23□□□□□ -1.73
CDCA3-209ENST00000544610 CTAG1AP78358 180 aa4.23□□□□□ -1.73
CDCA3-209ENST00000544610 C2orf82Q6UX34 121 aa4.23□□□□□ -1.73
CDCA3-209ENST00000544610 Q6ZRU5 148 aa4.23□□□□□ -1.73
CDCA3-209ENST00000544610 C9orf163Q8N9P6 203 aa4.23□□□□□ -1.73
CDCA3-209ENST00000544610 LINC00308Q8TCZ7 52 aa4.23□□□□□ -1.73
CDCA3-209ENST00000544610 C6orf48Q9UBA6 75 aa4.23□□□□□ -1.73
CDCA3-209ENST00000544610 CBY1Q9Y3M2 126 aa4.23□□□□□ -1.73
CDCA3-209ENST00000544610 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
CDCA3-209ENST00000544610 TRBV10-2A0A0K0K1G8 114 aa4.22□□□□□ -1.73
CDCA3-209ENST00000544610 LOC107984640A0A0U1RRK4 108 aa4.22□□□□□ -1.73
CDCA3-209ENST00000544610 SMIM13P0DJ93 91 aa4.22□□□□□ -1.73
CDCA3-209ENST00000544610 HIGD2BQ4VC39 106 aa4.22□□□□□ -1.73
CDCA3-209ENST00000544610 BVES-AS1Q5T3Y7 98 aa4.22□□□□□ -1.73
CDCA3-209ENST00000544610 ADAMTSL4-AS1Q5T5F5 129 aa4.22□□□□□ -1.73
CDCA3-209ENST00000544610 SCXQ7RTU7 201 aa4.22□□□□□ -1.73
CDCA3-209ENST00000544610 MIR7-3HGQ8N6C7 128 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms