RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SMCR5Q8TEV8 140 aa8.85□□□□□ -0.99
CHD4-211ENST00000544484 LINC01546A6NGU7 62 aa8.85□□□□□ -0.99
CHD4-211ENST00000544484 PCOTHQ58A44 107 aa8.85□□□□□ -0.99
CHD4-211ENST00000544484 SERP1Q9Y6X1 66 aa8.85□□□□□ -0.99
CHD4-211ENST00000544484 V9GYY9 64 aa8.84□□□□□ -0.99
CHD4-211ENST00000544484 NHLRC4P0CG21 123 aaPredicted RBP8.84□□□□□ -0.99
CHD4-211ENST00000544484 C6orf48Q9UBA6 75 aa8.84□□□□□ -0.99
CHD4-211ENST00000544484 PCSK5Q92824 1860 aa8.83□□□□□ -1
CHD4-211ENST00000544484 SOSTDC1Q6X4U4 206 aa8.83□□□□□ -1
CHD4-211ENST00000544484 KIAA0087Q14695 138 aa8.82□□□□□ -1
CHD4-211ENST00000544484 LINC00167Q96N53 147 aa8.81□□□□□ -1
CHD4-211ENST00000544484 MGAM2Q2M2H8 2515 aa8.8□□□□□ -1
CHD4-211ENST00000544484 TRBV7-6A0A0J9YX20 115 aa8.79□□□□□ -1
CHD4-211ENST00000544484 C5orf42Q9H799 3197 aa8.78□□□□□ -1
CHD4-211ENST00000544484 BPTFQ12830 3046 aa8.78□□□□□ -1
CHD4-211ENST00000544484 SPINK1P00995 79 aa8.77□□□□□ -1
CHD4-211ENST00000544484 FAM218AQ96MZ4 157 aa8.77□□□□□ -1
CHD4-211ENST00000544484 IGLV5-45A0A087WSX0 123 aa8.77□□□□□ -1.01
CHD4-211ENST00000544484 H0Y9P7 68 aa8.77□□□□□ -1.01
CHD4-211ENST00000544484 FSHBP01225 129 aa8.77□□□□□ -1.01
CHD4-211ENST00000544484 Q8NAQ8 132 aa8.77□□□□□ -1.01
CHD4-211ENST00000544484 SPATA3Q8NHX4 192 aa8.76□□□□□ -1.01
CHD4-211ENST00000544484 HCG22E2RYF7 251 aa8.76□□□□□ -1.01
CHD4-211ENST00000544484 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
CHD4-211ENST00000544484 TRBV7-7A0A0K0K1E9 115 aa8.76□□□□□ -1.01
CHD4-211ENST00000544484 CDIP1Q9H305 208 aa8.75□□□□□ -1.01
CHD4-211ENST00000544484 SMCPP49901 116 aaPredicted RBP8.75□□□□□ -1.01
CHD4-211ENST00000544484 PHF5AQ7RTV0 110 aaKnown RBP8.74□□□□□ -1.01
CHD4-211ENST00000544484 TMEM254Q8TBM7 123 aa8.74□□□□□ -1.01
CHD4-211ENST00000544484 MOBPQ13875 183 aa8.73□□□□□ -1.01
CHD4-211ENST00000544484 LINC00588Q9Y4M8 146 aa8.73□□□□□ -1.01
CHD4-211ENST00000544484 H3BNG1 76 aa8.72□□□□□ -1.01
CHD4-211ENST00000544484 SPACA4Q8TDM5 124 aa8.71□□□□□ -1.01
CHD4-211ENST00000544484 CHD7Q9P2D1 2997 aa8.7□□□□□ -1.02
CHD4-211ENST00000544484 SMIM29Q86T20 159 aa8.7□□□□□ -1.02
CHD4-211ENST00000544484 PSPHP1O15172 72 aa8.7□□□□□ -1.02
CHD4-211ENST00000544484 CHTF8P0CG12 524 aa8.69□□□□□ -1.02
CHD4-211ENST00000544484 ATRQ13535 2644 aa8.69□□□□□ -1.02
CHD4-211ENST00000544484 IGKV2D-30A0A075B6S6 120 aa8.68□□□□□ -1.02
CHD4-211ENST00000544484 IGKV2-30P06310 120 aa8.68□□□□□ -1.02
CHD4-211ENST00000544484 ELOF1P60002 83 aaKnown RBP8.68□□□□□ -1.02
CHD4-211ENST00000544484 CXCL6P80162 114 aa8.68□□□□□ -1.02
CHD4-211ENST00000544484 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
CHD4-211ENST00000544484 KLK9Q2XQG4 91 aa8.68□□□□□ -1.02
CHD4-211ENST00000544484 ST20-AS1Q8NBB2 130 aa8.68□□□□□ -1.02
CHD4-211ENST00000544484 LIMD2Q9BT23 127 aa8.68□□□□□ -1.02
CHD4-211ENST00000544484 C1orf64Q8NEQ6 169 aa8.67□□□□□ -1.02
CHD4-211ENST00000544484 PRO0461Q9UI25 63 aa8.67□□□□□ -1.02
CHD4-211ENST00000544484 RTL8CO15255 209 aa8.66□□□□□ -1.02
CHD4-211ENST00000544484 Q6ZRX8 168 aa8.65□□□□□ -1.02
CHD4-211ENST00000544484 Q6ZRP5 223 aa8.65□□□□□ -1.02
CHD4-211ENST00000544484 MAST4O15021 2626 aa8.65□□□□□ -1.02
CHD4-211ENST00000544484 EPM2AB3EWF7 344 aa8.64□□□□□ -1.03
CHD4-211ENST00000544484 CRYGAP11844 174 aa8.64□□□□□ -1.03
CHD4-211ENST00000544484 LINC00476Q8WZB0 136 aa8.64□□□□□ -1.03
CHD4-211ENST00000544484 CSNK1G2-AS1Q8NCQ2 148 aa8.63□□□□□ -1.03
CHD4-211ENST00000544484 RANBP2P49792 3224 aaKnown RBP8.63□□□□□ -1.03
CHD4-211ENST00000544484 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
CHD4-211ENST00000544484 C16orf90A8MZG2 172 aa8.62□□□□□ -1.03
CHD4-211ENST00000544484 LITAFQ99732 161 aa8.62□□□□□ -1.03
CHD4-211ENST00000544484 GVQW2A0A096LPI5 108 aaPredicted RBP8.61□□□□□ -1.03
CHD4-211ENST00000544484 Q6ZQT0 140 aa8.61□□□□□ -1.03
CHD4-211ENST00000544484 A0A096LNT2 108 aa8.61□□□□□ -1.03
CHD4-211ENST00000544484 hDV103S1A0JD37 113 aa8.61□□□□□ -1.03
CHD4-211ENST00000544484 CENPEQ02224 2701 aa8.6□□□□□ -1.03
CHD4-211ENST00000544484 KRTAP10-11P60412 298 aa8.6□□□□□ -1.03
CHD4-211ENST00000544484 PMAIP1Q13794 54 aa8.6□□□□□ -1.03
CHD4-211ENST00000544484 Q8NBF4 154 aa8.6□□□□□ -1.03
CHD4-211ENST00000544484 C1orf195Q5TG92 126 aa8.6□□□□□ -1.03
CHD4-211ENST00000544484 DNAH10OSP0CZ25 163 aa8.59□□□□□ -1.03
CHD4-211ENST00000544484 RPL37AP61513 92 aaKnown RBP8.59□□□□□ -1.03
CHD4-211ENST00000544484 FLNAP21333 2647 aaKnown RBP8.58□□□□□ -1.04
CHD4-211ENST00000544484 VPREB1P12018 145 aa8.58□□□□□ -1.04
CHD4-211ENST00000544484 KRTAP10-3P60369 221 aa8.58□□□□□ -1.04
CHD4-211ENST00000544484 EIF4EBP3O60516 100 aaPredicted RBP8.58□□□□□ -1.04
CHD4-211ENST00000544484 SERTAD4-AS1Q5TG53 156 aa8.57□□□□□ -1.04
CHD4-211ENST00000544484 K7EIL1 84 aa8.57□□□□□ -1.04
CHD4-211ENST00000544484 GIG44P09565 113 aaPredicted RBP8.56□□□□□ -1.04
CHD4-211ENST00000544484 C7orf65Q6ZTY9 151 aa8.55□□□□□ -1.04
CHD4-211ENST00000544484 ITPR3Q14573 2671 aa8.55□□□□□ -1.04
CHD4-211ENST00000544484 TYMSOSQ8TAI1 123 aa8.55□□□□□ -1.04
CHD4-211ENST00000544484 LOC110117498A0A087WWA1 95 aa8.54□□□□□ -1.04
CHD4-211ENST00000544484 IGLV6-57P01721 117 aa8.54□□□□□ -1.04
CHD4-211ENST00000544484 C19orf73Q9NVV2 129 aa8.54□□□□□ -1.04
CHD4-211ENST00000544484 BCE1O60756 84 aa8.53□□□□□ -1.04
CHD4-211ENST00000544484 WWC2-AS2Q96NR7 200 aa8.53□□□□□ -1.04
CHD4-211ENST00000544484 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
CHD4-211ENST00000544484 HELZ2Q9BYK8 2649 aaKnown RBP8.52□□□□□ -1.05
CHD4-211ENST00000544484 TM2D3Q9BRN9 247 aa8.52□□□□□ -1.05
CHD4-211ENST00000544484 LAMA3Q16787 3333 aa8.52□□□□□ -1.05
CHD4-211ENST00000544484 TP53AIP1Q9HCN2 124 aa8.51□□□□□ -1.05
CHD4-211ENST00000544484 CFAP46Q8IYW2 2715 aa8.5□□□□□ -1.05
CHD4-211ENST00000544484 MKI67P46013 3256 aaKnown RBP8.5□□□□□ -1.05
CHD4-211ENST00000544484 CFAP54Q96N23 3096 aa8.5□□□□□ -1.05
CHD4-211ENST00000544484 HTTP42858 3142 aa8.5□□□□□ -1.05
CHD4-211ENST00000544484 LINC00313P59037 77 aa8.5□□□□□ -1.05
CHD4-211ENST00000544484 A0A1B0GW54 56 aa8.49□□□□□ -1.05
CHD4-211ENST00000544484 IGLV1-50A0A075B6I6 118 aa8.48□□□□□ -1.05
CHD4-211ENST00000544484 CHD9Q3L8U1 2897 aa8.48□□□□□ -1.05
CHD4-211ENST00000544484 C15orf56Q8N910 161 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms