RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 HERV-K104P63124 156 aa8.31□□□□□ -1.08
VAMP1-208ENST00000544432 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
VAMP1-208ENST00000544432 HSPB8Q9UJY1 196 aa8.31□□□□□ -1.08
VAMP1-208ENST00000544432 LINC00587B1AMM8 73 aa8.3□□□□□ -1.08
VAMP1-208ENST00000544432 SCO1O75880 301 aa8.29□□□□□ -1.08
VAMP1-208ENST00000544432 PLNP26678 52 aa8.29□□□□□ -1.08
VAMP1-208ENST00000544432 Q8NDZ9 215 aa8.29□□□□□ -1.08
VAMP1-208ENST00000544432 IGKV2-28A0A075B6P5 120 aa8.28□□□□□ -1.08
VAMP1-208ENST00000544432 IGKV2D-28P01615 120 aa8.28□□□□□ -1.08
VAMP1-208ENST00000544432 UBE2AP49459 152 aa8.28□□□□□ -1.08
VAMP1-208ENST00000544432 NDUFA12Q9UI09 145 aa8.28□□□□□ -1.08
VAMP1-208ENST00000544432 H0Y8G0 127 aa8.27□□□□□ -1.09
VAMP1-208ENST00000544432 MYMXA0A1B0GTQ4 84 aa8.26□□□□□ -1.09
VAMP1-208ENST00000544432 LEPROTO15243 131 aa8.26□□□□□ -1.09
VAMP1-208ENST00000544432 ATP6V1G1O75348 118 aa8.26□□□□□ -1.09
VAMP1-208ENST00000544432 SMIM13P0DJ93 91 aa8.26□□□□□ -1.09
VAMP1-208ENST00000544432 FABP4P15090 132 aa8.26□□□□□ -1.09
VAMP1-208ENST00000544432 PLEKHB2Q96CS7 222 aa8.26□□□□□ -1.09
VAMP1-208ENST00000544432 TMEM126AQ9H061 195 aa8.26□□□□□ -1.09
VAMP1-208ENST00000544432 A0A0U1RRA0 63 aa8.25□□□□□ -1.09
VAMP1-208ENST00000544432 M0R378 163 aa8.25□□□□□ -1.09
VAMP1-208ENST00000544432 DPM2O94777 84 aa8.25□□□□□ -1.09
VAMP1-208ENST00000544432 CRYGAP11844 174 aa8.25□□□□□ -1.09
VAMP1-208ENST00000544432 MEIG1Q5JSS6 88 aa8.25□□□□□ -1.09
VAMP1-208ENST00000544432 TMEM238C9JI98 176 aa8.24□□□□□ -1.09
VAMP1-208ENST00000544432 IGKCP01834 107 aa8.24□□□□□ -1.09
VAMP1-208ENST00000544432 HERVK_113P61574 105 aa8.24□□□□□ -1.09
VAMP1-208ENST00000544432 MIR7-3HGQ8N6C7 128 aa8.24□□□□□ -1.09
VAMP1-208ENST00000544432 MAP1LC3CQ9BXW4 147 aa8.24□□□□□ -1.09
VAMP1-208ENST00000544432 A0A087X002 238 aa8.23□□□□□ -1.09
VAMP1-208ENST00000544432 LOC107984156A0A0G2JMH3 177 aa8.23□□□□□ -1.09
VAMP1-208ENST00000544432 NMUP48645 174 aa8.23□□□□□ -1.09
VAMP1-208ENST00000544432 FAM229BQ4G0N7 80 aa8.23□□□□□ -1.09
VAMP1-208ENST00000544432 ARL17AQ8IVW1 177 aa8.23□□□□□ -1.09
VAMP1-208ENST00000544432 IGKV2D-26A0A0A0MRZ7 120 aa8.22□□□□□ -1.09
VAMP1-208ENST00000544432 J3QQQ9 107 aa8.22□□□□□ -1.09
VAMP1-208ENST00000544432 TSPEAR-AS2P59090 65 aa8.22□□□□□ -1.09
VAMP1-208ENST00000544432 FAM19A1Q7Z5A9 133 aa8.22□□□□□ -1.09
VAMP1-208ENST00000544432 BOD1L2Q8IYS8 172 aa8.22□□□□□ -1.09
VAMP1-208ENST00000544432 HIST1H2BKO60814 126 aa8.21□□□□□ -1.1
VAMP1-208ENST00000544432 HIST1H2BJP06899 126 aa8.21□□□□□ -1.1
VAMP1-208ENST00000544432 HIST1H2BOP23527 126 aa8.21□□□□□ -1.1
VAMP1-208ENST00000544432 HIST1H2BBP33778 126 aa8.21□□□□□ -1.1
VAMP1-208ENST00000544432 HIST1H2BDP58876 126 aa8.21□□□□□ -1.1
VAMP1-208ENST00000544432 HIST1H2BCP62807 126 aa8.21□□□□□ -1.1
VAMP1-208ENST00000544432 HIST2H2BEQ16778 126 aa8.21□□□□□ -1.1
VAMP1-208ENST00000544432 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.21□□□□□ -1.1
VAMP1-208ENST00000544432 HIST1H2BHQ93079 126 aa8.21□□□□□ -1.1
VAMP1-208ENST00000544432 HIST1H2BNQ99877 126 aa8.21□□□□□ -1.1
VAMP1-208ENST00000544432 HIST1H2BMQ99879 126 aa8.21□□□□□ -1.1
VAMP1-208ENST00000544432 PRLHP81277 87 aa8.2□□□□□ -1.1
VAMP1-208ENST00000544432 TYMSOSQ8TAI1 123 aa8.2□□□□□ -1.1
VAMP1-208ENST00000544432 PMCHL2Q9BQD1 86 aa8.2□□□□□ -1.1
VAMP1-208ENST00000544432 KCNQ1DNQ9H478 68 aa8.2□□□□□ -1.1
VAMP1-208ENST00000544432 PRYO14603 147 aa8.19□□□□□ -1.1
VAMP1-208ENST00000544432 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
VAMP1-208ENST00000544432 ANAPC11Q9NYG5 84 aa8.19□□□□□ -1.1
VAMP1-208ENST00000544432 SYS1-DBNDD2H3BUS1 97 aa8.18□□□□□ -1.1
VAMP1-208ENST00000544432 SPRR1AP35321 89 aa8.18□□□□□ -1.1
VAMP1-208ENST00000544432 E9PLD3 99 aa8.17□□□□□ -1.1
VAMP1-208ENST00000544432 KRTAP13-2Q52LG2 175 aa8.17□□□□□ -1.1
VAMP1-208ENST00000544432 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
VAMP1-208ENST00000544432 TRBV10-2A0A0K0K1G8 114 aa8.16□□□□□ -1.1
VAMP1-208ENST00000544432 NCR3O14931 201 aa8.16□□□□□ -1.1
VAMP1-208ENST00000544432 KRTAP4-16G5E9R7 235 aaPredicted RBP8.15□□□□□ -1.1
VAMP1-208ENST00000544432 CTAG1AP78358 180 aa8.15□□□□□ -1.1
VAMP1-208ENST00000544432 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
VAMP1-208ENST00000544432 LINC01545Q5VT33 79 aa8.15□□□□□ -1.1
VAMP1-208ENST00000544432 PET117Q6UWS5 81 aa8.15□□□□□ -1.1
VAMP1-208ENST00000544432 HIGD2AQ9BW72 106 aa8.15□□□□□ -1.1
VAMP1-208ENST00000544432 LPAP08519 4548 aa8.15□□□□□ -1.1
VAMP1-208ENST00000544432 TRBV10-3A0A0K0K1G6 114 aa8.14□□□□□ -1.11
VAMP1-208ENST00000544432 NDUFC2O95298 119 aa8.14□□□□□ -1.11
VAMP1-208ENST00000544432 S100A12P80511 92 aa8.14□□□□□ -1.11
VAMP1-208ENST00000544432 DAND5Q8N907 189 aa8.14□□□□□ -1.11
VAMP1-208ENST00000544432 SPANXB1Q9NS25 103 aaPredicted RBP8.13□□□□□ -1.11
VAMP1-208ENST00000544432 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
VAMP1-208ENST00000544432 A0A0J9YXY3 114 aa8.12□□□□□ -1.11
VAMP1-208ENST00000544432 TSPAN13O95857 204 aa8.12□□□□□ -1.11
VAMP1-208ENST00000544432 PRR4Q16378 134 aa8.12□□□□□ -1.11
VAMP1-208ENST00000544432 SPRR4Q96PI1 79 aa8.12□□□□□ -1.11
VAMP1-208ENST00000544432 MIEN1Q9BRT3 115 aa8.12□□□□□ -1.11
VAMP1-208ENST00000544432 ETDCA0A1B0GVM5 59 aa8.11□□□□□ -1.11
VAMP1-208ENST00000544432 DDTP30046 118 aa8.11□□□□□ -1.11
VAMP1-208ENST00000544432 LINC00304Q8N9R0 145 aa8.11□□□□□ -1.11
VAMP1-208ENST00000544432 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
VAMP1-208ENST00000544432 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
VAMP1-208ENST00000544432 RNF213Q63HN8 5207 aa8.1□□□□□ -1.11
VAMP1-208ENST00000544432 B5MCH6 92 aa8.09□□□□□ -1.11
VAMP1-208ENST00000544432 TIMM17BO60830 172 aa8.09□□□□□ -1.11
VAMP1-208ENST00000544432 C3orf79P0CE67 100 aa8.09□□□□□ -1.11
VAMP1-208ENST00000544432 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
VAMP1-208ENST00000544432 SMCR5Q8TEV8 140 aa8.09□□□□□ -1.11
VAMP1-208ENST00000544432 S100A7L2Q5SY68 101 aa8.07□□□□□ -1.12
VAMP1-208ENST00000544432 C3orf22Q8N5N4 141 aa8.07□□□□□ -1.12
VAMP1-208ENST00000544432 LITAFQ99732 161 aa8.07□□□□□ -1.12
VAMP1-208ENST00000544432 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
VAMP1-208ENST00000544432 LINC00483Q53H64 154 aa8.06□□□□□ -1.12
VAMP1-208ENST00000544432 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
VAMP1-208ENST00000544432 CBY1Q9Y3M2 126 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms