RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 C5orf47Q569G3 176 aa10.88□□□□□ -0.67
SCNN1A-221ENST00000543768 C10orf25Q5T742 122 aa10.88□□□□□ -0.67
SCNN1A-221ENST00000543768 CMYA5Q8N3K9 4069 aa10.88□□□□□ -0.67
SCNN1A-221ENST00000543768 NANOS2P60321 138 aaKnown RBP10.87□□□□□ -0.67
SCNN1A-221ENST00000543768 H3BNG1 76 aa10.87□□□□□ -0.67
SCNN1A-221ENST00000543768 ATOX1O00244 68 aa10.87□□□□□ -0.67
SCNN1A-221ENST00000543768 SPAG11BQ08648 103 aa10.87□□□□□ -0.67
SCNN1A-221ENST00000543768 KPRPQ5T749 579 aaPredicted RBP10.87□□□□□ -0.67
SCNN1A-221ENST00000543768 GAGE2AQ6NT46 116 aa10.87□□□□□ -0.67
SCNN1A-221ENST00000543768 UNQ6190/PRO20217Q6UXQ8 127 aa10.87□□□□□ -0.67
SCNN1A-221ENST00000543768 FBN1P35555 2871 aaKnown RBP10.86□□□□□ -0.67
SCNN1A-221ENST00000543768 Q6ZTC4 211 aa10.85□□□□□ -0.67
SCNN1A-221ENST00000543768 FAM19A5Q7Z5A7 132 aaPredicted RBP10.85□□□□□ -0.67
SCNN1A-221ENST00000543768 DNAL4O96015 105 aa10.85□□□□□ -0.67
SCNN1A-221ENST00000543768 Q8NDZ9 215 aa10.85□□□□□ -0.67
SCNN1A-221ENST00000543768 CYSRT1A8MQ03 144 aa10.84□□□□□ -0.67
SCNN1A-221ENST00000543768 RPS28P62857 69 aaKnown RBP10.84□□□□□ -0.67
SCNN1A-221ENST00000543768 LECT2O14960 151 aa10.84□□□□□ -0.67
SCNN1A-221ENST00000543768 A0A0J9YWU9 116 aa10.83□□□□□ -0.68
SCNN1A-221ENST00000543768 WFDC10BQ8IUB3 73 aa10.83□□□□□ -0.68
SCNN1A-221ENST00000543768 PKD1L1Q8TDX9 2849 aa10.83□□□□□ -0.68
SCNN1A-221ENST00000543768 hADV29S1A0JD25 119 aa10.81□□□□□ -0.68
SCNN1A-221ENST00000543768 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
SCNN1A-221ENST00000543768 STAB1Q9NY15 2570 aa10.8□□□□□ -0.68
SCNN1A-221ENST00000543768 RPL18AQ02543 176 aaKnown RBP10.8□□□□□ -0.68
SCNN1A-221ENST00000543768 MUC7Q8TAX7 377 aa10.8□□□□□ -0.68
SCNN1A-221ENST00000543768 SLPIP03973 132 aa10.79□□□□□ -0.68
SCNN1A-221ENST00000543768 GVQW2A0A096LPI5 108 aaPredicted RBP10.79□□□□□ -0.68
SCNN1A-221ENST00000543768 NCR3O14931 201 aa10.79□□□□□ -0.68
SCNN1A-221ENST00000543768 ESRGQ1W209 222 aa10.79□□□□□ -0.68
SCNN1A-221ENST00000543768 TENM3Q9P273 2699 aa10.78□□□□□ -0.68
SCNN1A-221ENST00000543768 DNAH3Q8TD57 4116 aa10.78□□□□□ -0.68
SCNN1A-221ENST00000543768 KRTAP26-1Q6PEX3 210 aa10.78□□□□□ -0.68
SCNN1A-221ENST00000543768 OBSCN-AS1Q96MR7 158 aa10.78□□□□□ -0.68
SCNN1A-221ENST00000543768 LINC00167Q96N53 147 aa10.77□□□□□ -0.69
SCNN1A-221ENST00000543768 CYSTM1Q9H1C7 97 aa10.77□□□□□ -0.69
SCNN1A-221ENST00000543768 C6orf48Q9UBA6 75 aa10.77□□□□□ -0.69
SCNN1A-221ENST00000543768 TMEM258P61165 79 aa10.76□□□□□ -0.69
SCNN1A-221ENST00000543768 Q6JHZ5 121 aa10.76□□□□□ -0.69
SCNN1A-221ENST00000543768 Q8N814 137 aa10.75□□□□□ -0.69
SCNN1A-221ENST00000543768 SERP2Q8N6R1 65 aa10.75□□□□□ -0.69
SCNN1A-221ENST00000543768 ORMDL1Q9P0S3 153 aa10.75□□□□□ -0.69
SCNN1A-221ENST00000543768 DEFB131BA0A096LNP1 70 aa10.74□□□□□ -0.69
SCNN1A-221ENST00000543768 C6orf99Q4VX62 202 aa10.74□□□□□ -0.69
SCNN1A-221ENST00000543768 S100A7L2Q5SY68 101 aa10.74□□□□□ -0.69
SCNN1A-221ENST00000543768 IGKV3D-7A0A0C4DH55 119 aa10.74□□□□□ -0.69
SCNN1A-221ENST00000543768 C11orf45Q8TAV5 145 aa10.74□□□□□ -0.69
SCNN1A-221ENST00000543768 DPH3Q96FX2 82 aa10.74□□□□□ -0.69
SCNN1A-221ENST00000543768 UPK3BQ9BT76 320 aa10.74□□□□□ -0.69
SCNN1A-221ENST00000543768 C14orf132Q9NPU4 83 aa10.73□□□□□ -0.69
SCNN1A-221ENST00000543768 HIGD2BQ4VC39 106 aa10.72□□□□□ -0.69
SCNN1A-221ENST00000543768 LINC00846Q9NV44 126 aa10.72□□□□□ -0.69
SCNN1A-221ENST00000543768 IGLV6-57P01721 117 aa10.72□□□□□ -0.69
SCNN1A-221ENST00000543768 ZNF561-AS1K7EIQ3 104 aa10.71□□□□□ -0.69
SCNN1A-221ENST00000543768 C15orf56Q8N910 161 aa10.7□□□□□ -0.7
SCNN1A-221ENST00000543768 XAGE1AQ9HD64 81 aa10.7□□□□□ -0.7
SCNN1A-221ENST00000543768 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
SCNN1A-221ENST00000543768 A0A087WVE0 104 aa10.69□□□□□ -0.7
SCNN1A-221ENST00000543768 CAMK2N2Q96S95 79 aa10.69□□□□□ -0.7
SCNN1A-221ENST00000543768 MAST4O15021 2626 aa10.69□□□□□ -0.7
SCNN1A-221ENST00000543768 LINC00575Q6W349 94 aa10.69□□□□□ -0.7
SCNN1A-221ENST00000543768 USP17L23D6RBM5 183 aa10.68□□□□□ -0.7
SCNN1A-221ENST00000543768 Q6ZRU5 148 aa10.67□□□□□ -0.7
SCNN1A-221ENST00000543768 TMEM256-PLSCR3K7ERE1 68 aa10.67□□□□□ -0.7
SCNN1A-221ENST00000543768 C1orf43Q9BWL3 253 aa10.67□□□□□ -0.7
SCNN1A-221ENST00000543768 OXTP01178 125 aa10.66□□□□□ -0.7
SCNN1A-221ENST00000543768 DSCR8Q96T75 97 aa10.66□□□□□ -0.7
SCNN1A-221ENST00000543768 TRBV10-3A0A0K0K1G6 114 aa10.66□□□□□ -0.7
SCNN1A-221ENST00000543768 PRB2P02812 416 aaPredicted RBP10.65□□□□□ -0.7
SCNN1A-221ENST00000543768 IGKV2D-24A0A075B6R9 120 aa10.64□□□□□ -0.71
SCNN1A-221ENST00000543768 NOTCH1P46531 2555 aa10.64□□□□□ -0.71
SCNN1A-221ENST00000543768 JMJD7-PLA2G4BH0Y9G9 81 aa10.63□□□□□ -0.71
SCNN1A-221ENST00000543768 DNAH10OSP0CZ25 163 aa10.63□□□□□ -0.71
SCNN1A-221ENST00000543768 VPREB1P12018 145 aa10.63□□□□□ -0.71
SCNN1A-221ENST00000543768 TRAV23DV6A0A075B6W5 121 aa10.62□□□□□ -0.71
SCNN1A-221ENST00000543768 NDUFC2-KCTD14E9PQ53 114 aa10.62□□□□□ -0.71
SCNN1A-221ENST00000543768 CCKP06307 115 aa10.61□□□□□ -0.71
SCNN1A-221ENST00000543768 TM2D3Q9BRN9 247 aa10.61□□□□□ -0.71
SCNN1A-221ENST00000543768 TRAV10A0A0B4J240 114 aa10.61□□□□□ -0.71
SCNN1A-221ENST00000543768 Q5XG85 94 aa10.6□□□□□ -0.71
SCNN1A-221ENST00000543768 COL6A5A8TX70 2615 aa10.6□□□□□ -0.71
SCNN1A-221ENST00000543768 C4orf26Q17RF5 130 aa10.59□□□□□ -0.71
SCNN1A-221ENST00000543768 DIRC1Q969H9 104 aa10.59□□□□□ -0.71
SCNN1A-221ENST00000543768 K7EIL1 84 aa10.59□□□□□ -0.71
SCNN1A-221ENST00000543768 Q6ZRP5 223 aa10.59□□□□□ -0.71
SCNN1A-221ENST00000543768 LINC00588Q9Y4M8 146 aa10.59□□□□□ -0.71
SCNN1A-221ENST00000543768 F8WDY8 70 aa10.58□□□□□ -0.72
SCNN1A-221ENST00000543768 ZNF73O43830 326 aaPredicted RBP10.58□□□□□ -0.72
SCNN1A-221ENST00000543768 ATP5EP2Q5VTU8 51 aa10.58□□□□□ -0.72
SCNN1A-221ENST00000543768 M0R378 163 aa10.57□□□□□ -0.72
SCNN1A-221ENST00000543768 GHRHP01286 108 aa10.57□□□□□ -0.72
SCNN1A-221ENST00000543768 MRAPQ8TCY5 172 aa10.57□□□□□ -0.72
SCNN1A-221ENST00000543768 HUWE1Q7Z6Z7 4374 aaKnown RBP10.57□□□□□ -0.72
SCNN1A-221ENST00000543768 SYCNQ0VAF6 134 aa10.57□□□□□ -0.72
SCNN1A-221ENST00000543768 Q6ZQY7 126 aa10.57□□□□□ -0.72
SCNN1A-221ENST00000543768 HRCT1Q6UXD1 115 aa10.56□□□□□ -0.72
SCNN1A-221ENST00000543768 NBEAL1Q6ZS30 2694 aa10.56□□□□□ -0.72
SCNN1A-221ENST00000543768 ELOF1P60002 83 aaKnown RBP10.55□□□□□ -0.72
SCNN1A-221ENST00000543768 COX7BP24311 80 aa10.54□□□□□ -0.72
SCNN1A-221ENST00000543768 TRBV7-6A0A0J9YX20 115 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms