RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 SND1-IT1Q9HBX3 110 aa6.78□□□□□ -1.32
DDB1-222ENST00000543627 SMIM13P0DJ93 91 aa6.77□□□□□ -1.33
DDB1-222ENST00000543627 HERVK_113P61574 105 aa6.77□□□□□ -1.33
DDB1-222ENST00000543627 SFTA2Q6UW10 78 aa6.77□□□□□ -1.33
DDB1-222ENST00000543627 NDUFA12Q9UI09 145 aa6.77□□□□□ -1.33
DDB1-222ENST00000543627 COX17Q14061 63 aa6.76□□□□□ -1.33
DDB1-222ENST00000543627 IGKV2-28A0A075B6P5 120 aa6.75□□□□□ -1.33
DDB1-222ENST00000543627 MYMXA0A1B0GTQ4 84 aa6.75□□□□□ -1.33
DDB1-222ENST00000543627 LEPROTO15243 131 aa6.75□□□□□ -1.33
DDB1-222ENST00000543627 IGKV2D-28P01615 120 aa6.75□□□□□ -1.33
DDB1-222ENST00000543627 LGALS3P17931 250 aaKnown RBP6.75□□□□□ -1.33
DDB1-222ENST00000543627 S100A1P23297 94 aa6.75□□□□□ -1.33
DDB1-222ENST00000543627 RPL24P83731 157 aaKnown RBP6.75□□□□□ -1.33
DDB1-222ENST00000543627 DIRC1Q969H9 104 aa6.75□□□□□ -1.33
DDB1-222ENST00000543627 PLEKHB2Q96CS7 222 aa6.75□□□□□ -1.33
DDB1-222ENST00000543627 SYS1-DBNDD2H3BUS1 97 aa6.74□□□□□ -1.33
DDB1-222ENST00000543627 KRTDAPP60985 99 aa6.74□□□□□ -1.33
DDB1-222ENST00000543627 TP73-AS1Q9UF72 201 aa6.74□□□□□ -1.33
DDB1-222ENST00000543627 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
DDB1-222ENST00000543627 J3QQQ9 107 aa6.73□□□□□ -1.33
DDB1-222ENST00000543627 TSPEAR-AS2P59090 65 aa6.73□□□□□ -1.33
DDB1-222ENST00000543627 HERV-K104P63124 156 aa6.73□□□□□ -1.33
DDB1-222ENST00000543627 MIR7-3HGQ8N6C7 128 aa6.73□□□□□ -1.33
DDB1-222ENST00000543627 LINC01600Q96MT4 127 aa6.73□□□□□ -1.33
DDB1-222ENST00000543627 LINC00587B1AMM8 73 aa6.72□□□□□ -1.33
DDB1-222ENST00000543627 MT1HL1P0DM35 61 aa6.72□□□□□ -1.33
DDB1-222ENST00000543627 VPREB1P12018 145 aa6.72□□□□□ -1.33
DDB1-222ENST00000543627 UBE2AP49459 152 aa6.72□□□□□ -1.33
DDB1-222ENST00000543627 BOD1L2Q8IYS8 172 aa6.72□□□□□ -1.33
DDB1-222ENST00000543627 DAND5Q8N907 189 aa6.72□□□□□ -1.33
DDB1-222ENST00000543627 H0Y9J4 135 aa6.71□□□□□ -1.34
DDB1-222ENST00000543627 NCR3O14931 201 aa6.71□□□□□ -1.34
DDB1-222ENST00000543627 BCE1O60756 84 aa6.71□□□□□ -1.34
DDB1-222ENST00000543627 C3orf79P0CE67 100 aa6.71□□□□□ -1.34
DDB1-222ENST00000543627 IGLV5-37A0A075B6J1 123 aa6.7□□□□□ -1.34
DDB1-222ENST00000543627 ZNF861PO60384 105 aa6.7□□□□□ -1.34
DDB1-222ENST00000543627 RPL28P46779 137 aaKnown RBP6.7□□□□□ -1.34
DDB1-222ENST00000543627 NPC2P61916 151 aa6.7□□□□□ -1.34
DDB1-222ENST00000543627 PET117Q6UWS5 81 aa6.7□□□□□ -1.34
DDB1-222ENST00000543627 Q8NDZ9 215 aa6.7□□□□□ -1.34
DDB1-222ENST00000543627 TMEM238C9JI98 176 aa6.69□□□□□ -1.34
DDB1-222ENST00000543627 FAM19A1Q7Z5A9 133 aa6.69□□□□□ -1.34
DDB1-222ENST00000543627 PRR26Q8N8Z3 221 aa6.69□□□□□ -1.34
DDB1-222ENST00000543627 IGLV1-50A0A075B6I6 118 aa6.68□□□□□ -1.34
DDB1-222ENST00000543627 E9PLD3 99 aa6.68□□□□□ -1.34
DDB1-222ENST00000543627 NMUP48645 174 aa6.68□□□□□ -1.34
DDB1-222ENST00000543627 LINC01545Q5VT33 79 aa6.68□□□□□ -1.34
DDB1-222ENST00000543627 MIEN1Q9BRT3 115 aa6.68□□□□□ -1.34
DDB1-222ENST00000543627 C20orf202A1L168 122 aa6.67□□□□□ -1.34
DDB1-222ENST00000543627 M0R378 163 aa6.67□□□□□ -1.34
DDB1-222ENST00000543627 S100A2P29034 98 aa6.67□□□□□ -1.34
DDB1-222ENST00000543627 CTAG1AP78358 180 aa6.67□□□□□ -1.34
DDB1-222ENST00000543627 PRLHP81277 87 aa6.67□□□□□ -1.34
DDB1-222ENST00000543627 COA6Q5JTJ3 125 aaKnown RBP6.67□□□□□ -1.34
DDB1-222ENST00000543627 ATOH7Q8N100 152 aa6.67□□□□□ -1.34
DDB1-222ENST00000543627 S100A6P06703 90 aa6.66□□□□□ -1.34
DDB1-222ENST00000543627 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
DDB1-222ENST00000543627 TMEM126AQ9H061 195 aa6.66□□□□□ -1.34
DDB1-222ENST00000543627 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
DDB1-222ENST00000543627 A0A0J9YXY3 114 aa6.65□□□□□ -1.34
DDB1-222ENST00000543627 ZNF815PA8K554 130 aa6.64□□□□□ -1.35
DDB1-222ENST00000543627 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
DDB1-222ENST00000543627 ANAPC11Q9NYG5 84 aa6.64□□□□□ -1.35
DDB1-222ENST00000543627 IGKV2D-26A0A0A0MRZ7 120 aa6.63□□□□□ -1.35
DDB1-222ENST00000543627 S100A12P80511 92 aa6.63□□□□□ -1.35
DDB1-222ENST00000543627 ADAMTSL4-AS1Q5T5F5 129 aa6.63□□□□□ -1.35
DDB1-222ENST00000543627 HIGD2AQ9BW72 106 aa6.63□□□□□ -1.35
DDB1-222ENST00000543627 TRBV10-3A0A0K0K1G6 114 aa6.62□□□□□ -1.35
DDB1-222ENST00000543627 S100A7L2Q5SY68 101 aa6.62□□□□□ -1.35
DDB1-222ENST00000543627 HIST3H2BBQ8N257 126 aa6.62□□□□□ -1.35
DDB1-222ENST00000543627 TNXBP22105 4242 aa6.61□□□□□ -1.35
DDB1-222ENST00000543627 ETDCA0A1B0GVM5 59 aa6.61□□□□□ -1.35
DDB1-222ENST00000543627 KRTAP1-4P0C5Y4 121 aa6.61□□□□□ -1.35
DDB1-222ENST00000543627 DDTP30046 118 aa6.61□□□□□ -1.35
DDB1-222ENST00000543627 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
DDB1-222ENST00000543627 SNRPEP62304 92 aaKnown RBP6.6□□□□□ -1.35
DDB1-222ENST00000543627 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
DDB1-222ENST00000543627 OR13C6PQ8NH95 151 aa6.6□□□□□ -1.35
DDB1-222ENST00000543627 PRYO14603 147 aa6.59□□□□□ -1.35
DDB1-222ENST00000543627 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
DDB1-222ENST00000543627 CRYGAP11844 174 aa6.59□□□□□ -1.35
DDB1-222ENST00000543627 RPL13AP40429 203 aaKnown RBP6.59□□□□□ -1.35
DDB1-222ENST00000543627 SOSTDC1Q6X4U4 206 aa6.59□□□□□ -1.35
DDB1-222ENST00000543627 HIST1H2BLQ99880 126 aa6.59□□□□□ -1.35
DDB1-222ENST00000543627 KRTAP13-1Q8IUC0 172 aa6.58□□□□□ -1.36
DDB1-222ENST00000543627 TYMSOSQ8TAI1 123 aa6.58□□□□□ -1.36
DDB1-222ENST00000543627 SPANXB1Q9NS25 103 aaPredicted RBP6.58□□□□□ -1.36
DDB1-222ENST00000543627 A0A087X002 238 aa6.57□□□□□ -1.36
DDB1-222ENST00000543627 LOC107984156A0A0G2JMH3 177 aa6.57□□□□□ -1.36
DDB1-222ENST00000543627 HSBP1L1C9JCN9 74 aa6.57□□□□□ -1.36
DDB1-222ENST00000543627 TSPAN13O95857 204 aa6.57□□□□□ -1.36
DDB1-222ENST00000543627 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
DDB1-222ENST00000543627 ARL17AQ8IVW1 177 aa6.57□□□□□ -1.36
DDB1-222ENST00000543627 LINC00308Q8TCZ7 52 aa6.57□□□□□ -1.36
DDB1-222ENST00000543627 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
DDB1-222ENST00000543627 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
DDB1-222ENST00000543627 NDUFC2O95298 119 aa6.56□□□□□ -1.36
DDB1-222ENST00000543627 AKR1D1P51857 326 aa6.56□□□□□ -1.36
DDB1-222ENST00000543627 PCP2Q8IVA1 136 aa6.56□□□□□ -1.36
DDB1-222ENST00000543627 SMCR5Q8TEV8 140 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms