RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 NDUFA1O15239 70 aa5.61□□□□□ -1.51
PDLIM5-221ENST00000542407 GIG44P09565 113 aaPredicted RBP5.61□□□□□ -1.51
PDLIM5-221ENST00000542407 NCR3O14931 201 aa5.6□□□□□ -1.51
PDLIM5-221ENST00000542407 INSP01308 110 aa5.6□□□□□ -1.51
PDLIM5-221ENST00000542407 UBE2BP63146 152 aa5.6□□□□□ -1.51
PDLIM5-221ENST00000542407 RMI2Q96E14 147 aa5.6□□□□□ -1.51
PDLIM5-221ENST00000542407 A0A087WYN8 130 aa5.59□□□□□ -1.51
PDLIM5-221ENST00000542407 FUSP35637 526 aaKnown RBP eCLIP5.59□□□□□ -1.51
PDLIM5-221ENST00000542407 COX6A2Q02221 97 aa5.59□□□□□ -1.51
PDLIM5-221ENST00000542407 WFDC10AQ9H1F0 79 aa5.59□□□□□ -1.51
PDLIM5-221ENST00000542407 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
PDLIM5-221ENST00000542407 SLPIP03973 132 aa5.59□□□□□ -1.51
PDLIM5-221ENST00000542407 SNURFQ9Y675 71 aa5.59□□□□□ -1.51
PDLIM5-221ENST00000542407 CRPP02741 224 aa5.58□□□□□ -1.52
PDLIM5-221ENST00000542407 RPL28P46779 137 aaKnown RBP5.58□□□□□ -1.52
PDLIM5-221ENST00000542407 CMC4P56277 68 aaPredicted RBP5.58□□□□□ -1.52
PDLIM5-221ENST00000542407 Q1T7F1 81 aa5.58□□□□□ -1.52
PDLIM5-221ENST00000542407 NOTCH2Q04721 2471 aa5.57□□□□□ -1.52
PDLIM5-221ENST00000542407 C2CD3Q4AC94 2353 aa5.57□□□□□ -1.52
PDLIM5-221ENST00000542407 LECT2O14960 151 aa5.57□□□□□ -1.52
PDLIM5-221ENST00000542407 CSNK1G2-AS1Q8NCQ2 148 aa5.57□□□□□ -1.52
PDLIM5-221ENST00000542407 BCE1O60756 84 aa5.56□□□□□ -1.52
PDLIM5-221ENST00000542407 ENHOQ6UWT2 76 aa5.56□□□□□ -1.52
PDLIM5-221ENST00000542407 CHCHD7Q9BUK0 85 aa5.56□□□□□ -1.52
PDLIM5-221ENST00000542407 SETD2Q9BYW2 2564 aaPredicted RBP5.56□□□□□ -1.52
PDLIM5-221ENST00000542407 Q6ZSN1 163 aa5.56□□□□□ -1.52
PDLIM5-221ENST00000542407 C7orf65Q6ZTY9 151 aa5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 DIRC1Q969H9 104 aa5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 WNK1Q9H4A3 2382 aa5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 TENM1Q9UKZ4 2725 aa5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 MIFP14174 115 aa5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 LINC00313P59037 77 aa5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 RPL36AP83881 106 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 LINC00337Q8N6G1 96 aa5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 SMIM11BQ8TCY0 68 aa5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 RPL36ALQ969Q0 106 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 TOMM7Q9P0U1 55 aa5.55□□□□□ -1.52
PDLIM5-221ENST00000542407 CMYA5Q8N3K9 4069 aa5.54□□□□□ -1.52
PDLIM5-221ENST00000542407 VWFP04275 2813 aa5.54□□□□□ -1.52
PDLIM5-221ENST00000542407 NKAPP1Q8N9T2 125 aa5.54□□□□□ -1.52
PDLIM5-221ENST00000542407 SND1-IT1Q9HBX3 110 aa5.54□□□□□ -1.52
PDLIM5-221ENST00000542407 LINC00242Q5T6M2 205 aa5.54□□□□□ -1.52
PDLIM5-221ENST00000542407 MIR7-3HGQ8N6C7 128 aa5.54□□□□□ -1.52
PDLIM5-221ENST00000542407 IGHV3OR16-12A0A075B7B8 117 aa5.53□□□□□ -1.52
PDLIM5-221ENST00000542407 A8MU10 97 aa5.53□□□□□ -1.52
PDLIM5-221ENST00000542407 TRRAPQ9Y4A5 3859 aa5.53□□□□□ -1.52
PDLIM5-221ENST00000542407 A6NN06 94 aa5.53□□□□□ -1.52
PDLIM5-221ENST00000542407 SMIM1B2RUZ4 78 aa5.53□□□□□ -1.52
PDLIM5-221ENST00000542407 PSPHP1O15172 72 aa5.53□□□□□ -1.52
PDLIM5-221ENST00000542407 LINC00158P58513 81 aa5.53□□□□□ -1.52
PDLIM5-221ENST00000542407 Q6ZRP5 223 aa5.53□□□□□ -1.52
PDLIM5-221ENST00000542407 IGHV3-53P01767 116 aa5.52□□□□□ -1.53
PDLIM5-221ENST00000542407 SYCNQ0VAF6 134 aa5.52□□□□□ -1.53
PDLIM5-221ENST00000542407 NOTCH3Q9UM47 2321 aa5.52□□□□□ -1.53
PDLIM5-221ENST00000542407 IGKV3OR2-268A0A0C4DH90 116 aa5.52□□□□□ -1.53
PDLIM5-221ENST00000542407 IGLV5-39A0A0G2JS06 123 aa5.52□□□□□ -1.53
PDLIM5-221ENST00000542407 C9orf66Q5T8R8 295 aa5.52□□□□□ -1.53
PDLIM5-221ENST00000542407 Q6ZTI0 123 aa5.52□□□□□ -1.53
PDLIM5-221ENST00000542407 FAM30AQ9NZY2 134 aa5.52□□□□□ -1.53
PDLIM5-221ENST00000542407 IGKV2-28A0A075B6P5 120 aa5.52□□□□□ -1.53
PDLIM5-221ENST00000542407 IGKV2D-28P01615 120 aa5.52□□□□□ -1.53
PDLIM5-221ENST00000542407 CYSRT1A8MQ03 144 aa5.51□□□□□ -1.53
PDLIM5-221ENST00000542407 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
PDLIM5-221ENST00000542407 C16orf74Q96GX8 76 aa5.51□□□□□ -1.53
PDLIM5-221ENST00000542407 IGLV5-45A0A087WSX0 123 aa5.51□□□□□ -1.53
PDLIM5-221ENST00000542407 TRGV1A0A0A0MS02 117 aa5.51□□□□□ -1.53
PDLIM5-221ENST00000542407 LINC00269Q8N2A0 174 aa5.51□□□□□ -1.53
PDLIM5-221ENST00000542407 SPTSSBQ8NFR3 76 aa5.51□□□□□ -1.53
PDLIM5-221ENST00000542407 ORMDL1Q9P0S3 153 aa5.51□□□□□ -1.53
PDLIM5-221ENST00000542407 H0YGX0 51 aa5.5□□□□□ -1.53
PDLIM5-221ENST00000542407 ATP5EP2Q5VTU8 51 aa5.5□□□□□ -1.53
PDLIM5-221ENST00000542407 UBE2AP49459 152 aa5.5□□□□□ -1.53
PDLIM5-221ENST00000542407 MP68P56378 58 aa5.5□□□□□ -1.53
PDLIM5-221ENST00000542407 NOP10Q9NPE3 64 aaKnown RBP5.5□□□□□ -1.53
PDLIM5-221ENST00000542407 JMJD1CQ15652 2540 aa5.5□□□□□ -1.53
PDLIM5-221ENST00000542407 DNAH3Q8TD57 4116 aa5.49□□□□□ -1.53
PDLIM5-221ENST00000542407 PLA2G1BP04054 148 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-221ENST00000542407 OBSCN-AS1Q96MR7 158 aa5.49□□□□□ -1.53
PDLIM5-221ENST00000542407 UBL5Q9BZL1 73 aa5.49□□□□□ -1.53
PDLIM5-221ENST00000542407 TRAV22A0A0B4J277 110 aa5.49□□□□□ -1.53
PDLIM5-221ENST00000542407 C16orf90A8MZG2 172 aa5.49□□□□□ -1.53
PDLIM5-221ENST00000542407 KRTAP24-1Q3LI83 254 aa5.49□□□□□ -1.53
PDLIM5-221ENST00000542407 LINC01554Q52M75 96 aa5.49□□□□□ -1.53
PDLIM5-221ENST00000542407 HAMPP81172 84 aa5.48□□□□□ -1.53
PDLIM5-221ENST00000542407 CCL18P55774 89 aa5.48□□□□□ -1.53
PDLIM5-221ENST00000542407 LINC00612Q8N6U2 182 aa5.48□□□□□ -1.53
PDLIM5-221ENST00000542407 F8P00451 2351 aa5.48□□□□□ -1.53
PDLIM5-221ENST00000542407 TEP1Q99973 2627 aaKnown RBP5.47□□□□□ -1.53
PDLIM5-221ENST00000542407 TRBV10-3A0A0K0K1G6 114 aa5.47□□□□□ -1.53
PDLIM5-221ENST00000542407 K7EQD1 137 aa5.47□□□□□ -1.53
PDLIM5-221ENST00000542407 TRAV10A0A0B4J240 114 aa5.46□□□□□ -1.53
PDLIM5-221ENST00000542407 TRBV10-1A0A0K0K1A3 114 aa5.46□□□□□ -1.53
PDLIM5-221ENST00000542407 Q6ZTC4 211 aa5.46□□□□□ -1.53
PDLIM5-221ENST00000542407 H0Y9J4 135 aa5.46□□□□□ -1.54
PDLIM5-221ENST00000542407 COX7B2Q8TF08 81 aa5.46□□□□□ -1.54
PDLIM5-221ENST00000542407 FBN1P35555 2871 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-221ENST00000542407 hDV103S1A0JD37 113 aa5.46□□□□□ -1.54
PDLIM5-221ENST00000542407 NTM-AS1Q6ZSK4 140 aa5.45□□□□□ -1.54
PDLIM5-221ENST00000542407 ANK2Q01484 3957 aa5.45□□□□□ -1.54
PDLIM5-221ENST00000542407 ATRQ13535 2644 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 360.1 ms