RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 RTL8CO15255 209 aa2.88□□□□□ -1.95
SNHG1-219ENST00000542112 TFF1P04155 84 aa2.88□□□□□ -1.95
SNHG1-219ENST00000542112 NANOS2P60321 138 aaKnown RBP2.88□□□□□ -1.95
SNHG1-219ENST00000542112 SPAG11BQ08648 103 aa2.88□□□□□ -1.95
SNHG1-219ENST00000542112 MALRD1Q5VYJ5 2156 aa2.88□□□□□ -1.95
SNHG1-219ENST00000542112 PIEZO2Q9H5I5 2752 aa2.88□□□□□ -1.95
SNHG1-219ENST00000542112 CHD8Q9HCK8 2581 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 SPTA1P02549 2419 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 IGLV7-46A0A075B6I9 117 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 A0A096LNT2 108 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV3-64DA0A0J9YX35 117 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 A8MU10 97 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 IGLV1-51P01701 117 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 KPRPQ5T749 579 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-219ENST00000542112 MINOS1Q5TGZ0 78 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 SPINK14Q6IE38 97 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 FDCSPQ8NFU4 85 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 ARHGAP32A7KAX9 2087 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 PKDREJQ9NTG1 2253 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 DCHS1Q96JQ0 3298 aa2.87□□□□□ -1.95
SNHG1-219ENST00000542112 BSNQ9UPA5 3926 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 NAV3Q8IVL0 2385 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV4-61A0A0C4DH41 118 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 H0Y9P7 68 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV3-23P01764 117 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 CCL3L1P16619 93 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 COX6A2Q02221 97 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 SMIM29Q86T20 159 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 Q8IZM0 81 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 CHCHD10Q8WYQ3 142 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-219ENST00000542112 TTTY12Q9BZ98 90 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 DPM3Q9P2X0 92 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 LOC400499M0QZD8 3231 aa2.86□□□□□ -1.95
SNHG1-219ENST00000542112 DSPP15924 2871 aaKnown RBP2.85□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV3OR16-13A0A075B7E8 117 aa2.85□□□□□ -1.95
SNHG1-219ENST00000542112 H3BUA1 57 aa2.85□□□□□ -1.95
SNHG1-219ENST00000542112 COA5Q86WW8 74 aa2.85□□□□□ -1.95
SNHG1-219ENST00000542112 Q8NAQ8 132 aa2.85□□□□□ -1.95
SNHG1-219ENST00000542112 LINC01006Q8NI28 216 aa2.85□□□□□ -1.95
SNHG1-219ENST00000542112 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
SNHG1-219ENST00000542112 FRYQ5TBA9 3013 aa2.85□□□□□ -1.95
SNHG1-219ENST00000542112 PKD1L2Q7Z442 2459 aa2.85□□□□□ -1.95
SNHG1-219ENST00000542112 FREM2Q5SZK8 3169 aa2.85□□□□□ -1.95
SNHG1-219ENST00000542112 DMXL2Q8TDJ6 3036 aa2.85□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV3OR16-8A0A075B7F1 116 aa2.84□□□□□ -1.95
SNHG1-219ENST00000542112 ATP6V0E1O15342 81 aa2.84□□□□□ -1.95
SNHG1-219ENST00000542112 APELAP0DMC3 54 aa2.84□□□□□ -1.95
SNHG1-219ENST00000542112 ROMO1P60602 79 aa2.84□□□□□ -1.95
SNHG1-219ENST00000542112 SPAG11AQ6PDA7 123 aa2.84□□□□□ -1.95
SNHG1-219ENST00000542112 Q6ZQY7 126 aa2.84□□□□□ -1.95
SNHG1-219ENST00000542112 C9orf163Q8N9P6 203 aa2.84□□□□□ -1.95
SNHG1-219ENST00000542112 ZNRD1Q9P1U0 126 aa2.84□□□□□ -1.95
SNHG1-219ENST00000542112 MINOS1-NBL1R4GNA1 71 aa2.84□□□□□ -1.95
SNHG1-219ENST00000542112 ACACBO00763 2458 aa2.84□□□□□ -1.96
SNHG1-219ENST00000542112 CELSR3Q9NYQ7 3312 aa2.83□□□□□ -1.96
SNHG1-219ENST00000542112 TRGV4A0A0C4DH28 118 aa2.83□□□□□ -1.96
SNHG1-219ENST00000542112 ODF3BA8MYP8 253 aa2.83□□□□□ -1.96
SNHG1-219ENST00000542112 IGLV6-57P01721 117 aa2.83□□□□□ -1.96
SNHG1-219ENST00000542112 IGHV3-11P01762 117 aa2.83□□□□□ -1.96
SNHG1-219ENST00000542112 MSMBP08118 114 aa2.83□□□□□ -1.96
SNHG1-219ENST00000542112 DEFB109BQ30KR1 87 aa2.83□□□□□ -1.96
SNHG1-219ENST00000542112 SPATA8Q6RVD6 105 aa2.83□□□□□ -1.96
SNHG1-219ENST00000542112 DEFB108BQ8NET1 73 aa2.83□□□□□ -1.96
SNHG1-219ENST00000542112 USMG5Q96IX5 58 aa2.83□□□□□ -1.96
SNHG1-219ENST00000542112 USP24Q9UPU5 2620 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 IGLV5-48A0A075B6I7 105 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 A0A087WSZ3 146 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 A0A1W2PNM2 257 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 M0R2N4 97 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 CDK2AP2O75956 126 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 DEFB112Q30KQ8 113 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 C1orf134Q5TEV5 83 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 LINC00612Q8N6U2 182 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 WNK2Q9Y3S1 2297 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 CACNA1BQ00975 2339 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 AKAP6Q13023 2319 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 ANKHD1Q8IWZ3 2542 aaKnown RBP2.82□□□□□ -1.96
SNHG1-219ENST00000542112 ATMQ13315 3056 aa2.82□□□□□ -1.96
SNHG1-219ENST00000542112 MUC4Q99102 2169 aa2.81□□□□□ -1.96
SNHG1-219ENST00000542112 SPENQ96T58 3664 aaKnown RBP2.81□□□□□ -1.96
SNHG1-219ENST00000542112 DEFB131BA0A096LNP1 70 aa2.81□□□□□ -1.96
SNHG1-219ENST00000542112 A8MTW9 85 aa2.81□□□□□ -1.96
SNHG1-219ENST00000542112 PRB4P10163 310 aaPredicted RBP2.81□□□□□ -1.96
SNHG1-219ENST00000542112 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
SNHG1-219ENST00000542112 SPRR4Q96PI1 79 aa2.81□□□□□ -1.96
SNHG1-219ENST00000542112 FAM215AQ9Y5M1 114 aa2.81□□□□□ -1.96
SNHG1-219ENST00000542112 MED13LQ71F56 2210 aa2.81□□□□□ -1.96
SNHG1-219ENST00000542112 PLXNB1O43157 2135 aa2.8□□□□□ -1.96
SNHG1-219ENST00000542112 IGKV2D-30A0A075B6S6 120 aa2.8□□□□□ -1.96
SNHG1-219ENST00000542112 A0A1B0GUV1 79 aa2.8□□□□□ -1.96
SNHG1-219ENST00000542112 B4DSR2 109 aa2.8□□□□□ -1.96
SNHG1-219ENST00000542112 SPINK7P58062 85 aa2.8□□□□□ -1.96
SNHG1-219ENST00000542112 CNEP1R1Q8N9A8 125 aa2.8□□□□□ -1.96
SNHG1-219ENST00000542112 TOMM7Q9P0U1 55 aa2.8□□□□□ -1.96
SNHG1-219ENST00000542112 ZFHX3Q15911 3703 aa2.8□□□□□ -1.96
SNHG1-219ENST00000542112 LAMA5O15230 3695 aa2.8□□□□□ -1.96
SNHG1-219ENST00000542112 IGSF10Q6WRI0 2623 aa2.79□□□□□ -1.96
SNHG1-219ENST00000542112 ABCA2Q9BZC7 2435 aa2.79□□□□□ -1.96
SNHG1-219ENST00000542112 IGKV2D-24A0A075B6R9 120 aa2.79□□□□□ -1.96
SNHG1-219ENST00000542112 UQCR11O14957 56 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms