RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ATP5EP56381 51 aaPredicted RBP7.28□□□□□ -1.24
CHFR-219ENST00000541341 C6orf226Q5I0X4 101 aa7.28□□□□□ -1.24
CHFR-219ENST00000541341 LYPD5Q6UWN5 251 aa7.28□□□□□ -1.24
CHFR-219ENST00000541341 IGHV3OR16-9A0A0B4J2B5 98 aa7.27□□□□□ -1.25
CHFR-219ENST00000541341 A0A1B0GUV1 79 aa7.27□□□□□ -1.25
CHFR-219ENST00000541341 LECT2O14960 151 aa7.27□□□□□ -1.25
CHFR-219ENST00000541341 CCL18P55774 89 aa7.27□□□□□ -1.25
CHFR-219ENST00000541341 FAM19A5Q7Z5A7 132 aaPredicted RBP7.27□□□□□ -1.25
CHFR-219ENST00000541341 LINC00337Q8N6G1 96 aa7.27□□□□□ -1.25
CHFR-219ENST00000541341 DPH3Q96FX2 82 aa7.27□□□□□ -1.25
CHFR-219ENST00000541341 FAM218AQ96MZ4 157 aa7.27□□□□□ -1.25
CHFR-219ENST00000541341 IGKV2-28A0A075B6P5 120 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 TRGV2A0A075B6R0 118 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 TRBV6-8A0A0A6YYG3 113 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 TRGV4A0A0C4DH28 118 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 A0A0U1RRA0 63 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 IGKV2D-28P01615 120 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 NTM-AS1Q6ZSK4 140 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 Q9HAA7 133 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 C14orf132Q9NPU4 83 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 TOMM7Q9P0U1 55 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 C22orf24Q9Y442 160 aa7.26□□□□□ -1.25
CHFR-219ENST00000541341 IGHV4-30-4P0DP06 118 aa7.25□□□□□ -1.25
CHFR-219ENST00000541341 RETNQ9HD89 108 aa7.25□□□□□ -1.25
CHFR-219ENST00000541341 LINC00846Q9NV44 126 aa7.25□□□□□ -1.25
CHFR-219ENST00000541341 C1orf158Q8N1D5 194 aa7.24□□□□□ -1.25
CHFR-219ENST00000541341 Q8N814 137 aa7.24□□□□□ -1.25
CHFR-219ENST00000541341 XCL2Q9UBD3 114 aa7.24□□□□□ -1.25
CHFR-219ENST00000541341 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
CHFR-219ENST00000541341 LOC110117498A0A087WWA1 95 aa7.23□□□□□ -1.25
CHFR-219ENST00000541341 A0A087WYN8 130 aa7.23□□□□□ -1.25
CHFR-219ENST00000541341 TM2D3Q9BRN9 247 aa7.23□□□□□ -1.25
CHFR-219ENST00000541341 UPK3BQ9BT76 320 aa7.23□□□□□ -1.25
CHFR-219ENST00000541341 ZNF561-AS1K7EIQ3 104 aa7.22□□□□□ -1.25
CHFR-219ENST00000541341 CXCL6P80162 114 aa7.22□□□□□ -1.25
CHFR-219ENST00000541341 KIR2DL5BQ8NHK3 375 aa7.22□□□□□ -1.25
CHFR-219ENST00000541341 SERP1Q9Y6X1 66 aa7.22□□□□□ -1.25
CHFR-219ENST00000541341 ALMS1Q8TCU4 4167 aa7.22□□□□□ -1.25
CHFR-219ENST00000541341 IGHV4-28A0A0C4DH34 117 aa7.21□□□□□ -1.26
CHFR-219ENST00000541341 IGKV3D-7A0A0C4DH55 119 aa7.21□□□□□ -1.26
CHFR-219ENST00000541341 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
CHFR-219ENST00000541341 RBM3P98179 157 aaKnown RBP7.21□□□□□ -1.26
CHFR-219ENST00000541341 Q6ZTI0 123 aa7.21□□□□□ -1.26
CHFR-219ENST00000541341 C19orf73Q9NVV2 129 aa7.21□□□□□ -1.26
CHFR-219ENST00000541341 ODF3L2Q3SX64 289 aa7.2□□□□□ -1.26
CHFR-219ENST00000541341 NOP10Q9NPE3 64 aaKnown RBP7.2□□□□□ -1.26
CHFR-219ENST00000541341 PFN2P35080 140 aa7.19□□□□□ -1.26
CHFR-219ENST00000541341 DSCR8Q96T75 97 aa7.19□□□□□ -1.26
CHFR-219ENST00000541341 Q9UF83 564 aa7.19□□□□□ -1.26
CHFR-219ENST00000541341 TRBV7-6A0A0J9YX20 115 aa7.18□□□□□ -1.26
CHFR-219ENST00000541341 FAM236DA0A1B0GTK5 79 aa7.18□□□□□ -1.26
CHFR-219ENST00000541341 NCR3O14931 201 aa7.18□□□□□ -1.26
CHFR-219ENST00000541341 ERC2-IT1O76042 136 aa7.18□□□□□ -1.26
CHFR-219ENST00000541341 FAM236CP0DP71 79 aa7.18□□□□□ -1.26
CHFR-219ENST00000541341 CD164L2Q6UWJ8 174 aa7.18□□□□□ -1.26
CHFR-219ENST00000541341 WFDC10AQ9H1F0 79 aa7.18□□□□□ -1.26
CHFR-219ENST00000541341 FRAS1Q86XX4 4008 aa7.18□□□□□ -1.26
CHFR-219ENST00000541341 A0A1B0GW54 56 aa7.17□□□□□ -1.26
CHFR-219ENST00000541341 KLKP1Q107X0 134 aa7.17□□□□□ -1.26
CHFR-219ENST00000541341 C6orf223Q8N319 242 aa7.17□□□□□ -1.26
CHFR-219ENST00000541341 FHL2Q14192 279 aa7.15□□□□□ -1.26
CHFR-219ENST00000541341 LINC00575Q6W349 94 aa7.15□□□□□ -1.26
CHFR-219ENST00000541341 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
CHFR-219ENST00000541341 PRO0255Q9UI72 69 aa7.15□□□□□ -1.26
CHFR-219ENST00000541341 SMIM26A0A096LP01 95 aa7.14□□□□□ -1.27
CHFR-219ENST00000541341 XCL1P47992 114 aa7.14□□□□□ -1.27
CHFR-219ENST00000541341 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.14□□□□□ -1.27
CHFR-219ENST00000541341 LINC00612Q8N6U2 182 aa7.14□□□□□ -1.27
CHFR-219ENST00000541341 LAMTOR3Q9UHA4 124 aa7.14□□□□□ -1.27
CHFR-219ENST00000541341 LYRM9A8MSI8 78 aa7.13□□□□□ -1.27
CHFR-219ENST00000541341 Q6ZQT0 140 aa7.13□□□□□ -1.27
CHFR-219ENST00000541341 IGLV4-60A0A075B6I1 120 aa7.12□□□□□ -1.27
CHFR-219ENST00000541341 F8WDY8 70 aa7.12□□□□□ -1.27
CHFR-219ENST00000541341 ENHOQ6UWT2 76 aa7.12□□□□□ -1.27
CHFR-219ENST00000541341 GVQW2A0A096LPI5 108 aaPredicted RBP7.11□□□□□ -1.27
CHFR-219ENST00000541341 IGKV3OR2-268A0A0C4DH90 116 aa7.11□□□□□ -1.27
CHFR-219ENST00000541341 LOC100131303A0A0U1RQF7 123 aa7.11□□□□□ -1.27
CHFR-219ENST00000541341 PLAC8L1A1L4L8 177 aa7.11□□□□□ -1.27
CHFR-219ENST00000541341 EPM2AB3EWF7 344 aa7.11□□□□□ -1.27
CHFR-219ENST00000541341 LY6G6CO95867 125 aa7.11□□□□□ -1.27
CHFR-219ENST00000541341 TRAV23DV6A0A075B6W5 121 aa7.1□□□□□ -1.27
CHFR-219ENST00000541341 A0A087WVE0 104 aa7.1□□□□□ -1.27
CHFR-219ENST00000541341 A0A0J9YWU9 116 aa7.1□□□□□ -1.27
CHFR-219ENST00000541341 PRM2P04554 102 aa7.1□□□□□ -1.27
CHFR-219ENST00000541341 C20orf197Q8N268 126 aa7.1□□□□□ -1.27
CHFR-219ENST00000541341 CSNK1G2-AS1Q8NCQ2 148 aa7.1□□□□□ -1.27
CHFR-219ENST00000541341 SLPIP03973 132 aa7.09□□□□□ -1.27
CHFR-219ENST00000541341 LINC01547P58512 204 aaPredicted RBP7.09□□□□□ -1.27
CHFR-219ENST00000541341 C6orf99Q4VX62 202 aa7.09□□□□□ -1.27
CHFR-219ENST00000541341 PRO0628Q9UI54 55 aa7.09□□□□□ -1.27
CHFR-219ENST00000541341 DNAH10Q8IVF4 4471 aa7.09□□□□□ -1.28
CHFR-219ENST00000541341 KMT2AQ03164 3969 aa7.09□□□□□ -1.28
CHFR-219ENST00000541341 GYPEP15421 78 aa7.08□□□□□ -1.28
CHFR-219ENST00000541341 LINC00476Q8WZB0 136 aa7.08□□□□□ -1.28
CHFR-219ENST00000541341 DIRC1Q969H9 104 aa7.08□□□□□ -1.28
CHFR-219ENST00000541341 IGLV6-57P01721 117 aa7.07□□□□□ -1.28
CHFR-219ENST00000541341 GIG44P09565 113 aaPredicted RBP7.07□□□□□ -1.28
CHFR-219ENST00000541341 APOC4P55056 127 aa7.07□□□□□ -1.28
CHFR-219ENST00000541341 NANOS2P60321 138 aaKnown RBP7.07□□□□□ -1.28
CHFR-219ENST00000541341 HAMPP81172 84 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms